CK935535

Overview
NameCK935535
Unique NameCK935535
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: CSK21_BOVIN (Casein kinase II subunit alpha OS=Bos taurus GN=CSNK2A1 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 6.979e-33
Identity = 62/90 (68.89%), Postives = 80/90 (88.89%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQV 274
            N+DQLV+IAKVLGT++L  Y++KY++ELDP+ + ++GRHSRK W +F++++NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HPYF  V
Sbjct:  238 NYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327          
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: CSK21_CHICK (Casein kinase II subunit alpha OS=Gallus gallus GN=CSNK2A1 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 9.115e-33
Identity = 61/87 (70.11%), Postives = 79/87 (90.80%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 265
            N+DQLV+IAKVLGT++L  Y++KY++ELDP+ + ++GRHSRK W +F++++NQHLVSPEA+DFLDKLLRYDHQ RLTAREAM HPYF
Sbjct:  238 NYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324          
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: CSK2A_SPOFR (Casein kinase II subunit alpha OS=Spodoptera frugiperda PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.190e-32
Identity = 61/87 (70.11%), Postives = 78/87 (89.66%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 265
            N+DQLV+IAKVLGT+EL  YL+KYH+ELDP+ + ++GRHSRK W +F++++NQHLVSPEA+DFLD+LLRYDH +R TAREAM HPYF
Sbjct:  238 NYDQLVRIAKVLGTEELFEYLDKYHIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDRLLRYDHYERYTAREAMDHPYF 324          
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: CSK22_MOUSE (Casein kinase II subunit alpha' OS=Mus musculus GN=Csnk2a2 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.031e-32
Identity = 63/95 (66.32%), Postives = 78/95 (82.11%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVRAAES 289
            N+DQLV+IAKVLGTDEL  YL KYH++LDP  + ++G+HSRK W  FI+++N+HLVSPEA+D LDKLLRYDHQ RLTA+EAM HPYF  V   +S
Sbjct:  239 NYDQLVRIAKVLGTDELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPVVKEQS 333          
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: CSK22_BOVIN (Casein kinase II subunit alpha' OS=Bos taurus GN=CSNK2A2 PE=1 SV=3)

HSP 1 Score: 138.658 bits (348), Expect = 2.031e-32
Identity = 63/95 (66.32%), Postives = 78/95 (82.11%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVRAAES 289
            N+DQLV+IAKVLGTDEL  YL KYH++LDP  + ++G+HSRK W  FI+++N+HLVSPEA+D LDKLLRYDHQ RLTA+EAM HPYF  V   +S
Sbjct:  239 NYDQLVRIAKVLGTDELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPVVKEQS 333          
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: CSK22_CHICK (Casein kinase II subunit alpha' OS=Gallus gallus PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.652e-32
Identity = 63/95 (66.32%), Postives = 77/95 (81.05%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVRAAES 289
            N+DQLV+IAKVLGTDEL  YL KYH+ELDP  + ++G+HSRK W  FI+++N+HLVSPE +D LDKLLRYDHQ RLTA+EAM HPYF  V   +S
Sbjct:  239 NYDQLVRIAKVLGTDELYGYLKKYHIELDPHFNDILGQHSRKRWENFIHSENRHLVSPEVLDLLDKLLRYDHQQRLTAKEAMEHPYFYPVVKEQS 333          
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: CSK2A_CAEEL (Casein kinase II subunit alpha OS=Caenorhabditis elegans GN=kin-3 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.464e-32
Identity = 62/95 (65.26%), Postives = 80/95 (84.21%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVRAAES 289
            N+DQLV+IAKVLGTDEL  Y+ +YH++LDP+ + ++GRHSRK W +FI+A+NQHLV+PEA+DFLDKLLRYDH +RLTA+EAM H YF  V  A +
Sbjct:  237 NYDQLVRIAKVLGTDELYEYIARYHIDLDPRFNDILGRHSRKRWERFIHAENQHLVTPEALDFLDKLLRYDHAERLTAQEAMGHEYFRPVVEAHA 331          
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: CSK22_HUMAN (Casein kinase II subunit alpha' OS=Homo sapiens GN=CSNK2A2 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.908e-32
Identity = 62/95 (65.26%), Postives = 78/95 (82.11%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVRAAES 289
            N+DQLV+IAKVLGT+EL  YL KYH++LDP  + ++G+HSRK W  FI+++N+HLVSPEA+D LDKLLRYDHQ RLTA+EAM HPYF  V   +S
Sbjct:  239 NYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPVVKEQS 333          
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: CSK21_MOUSE (Casein kinase II subunit alpha OS=Mus musculus GN=Csnk2a1 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.908e-32
Identity = 60/90 (66.67%), Postives = 79/90 (87.78%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQV 274
            N+DQLV+IAKVLGT++L  Y++KY++ELDP+ + ++GRHSRK W +F++++NQHLVSPEA+DFLDKLLRYDHQ RLT REAM HP+F  V
Sbjct:  238 NYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTVREAMEHPFFYTV 327          
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: CSK2A_DICDI (Casein kinase II subunit alpha OS=Dictyostelium discoideum GN=casK PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 9.761e-27
Identity = 54/87 (62.07%), Postives = 69/87 (79.31%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 265
            N DQLVKI K+LGT+E  AYL+KY + +D  + +++G+H +KPWS+FI  +NQHL  PEAIDFL+KLLRYD  +RLT REAM HPYF
Sbjct:  246 NIDQLVKIVKILGTEEFYAYLDKYGIVVDHTILSIIGKHPKKPWSRFITKENQHLAVPEAIDFLEKLLRYDPAERLTTREAMEHPYF 332          
The following BLAST results are available for this feature:
BLAST of CK935535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
CSK21_BOVIN6.979e-3368.89Casein kinase II subunit alpha OS=Bos taurus GN=CS... [more]
CSK21_CHICK9.115e-3370.11Casein kinase II subunit alpha OS=Gallus gallus GN... [more]
CSK2A_SPOFR1.190e-3270.11Casein kinase II subunit alpha OS=Spodoptera frugi... [more]
CSK22_MOUSE2.031e-3266.32Casein kinase II subunit alpha' OS=Mus musculus GN... [more]
CSK22_BOVIN2.031e-3266.32Casein kinase II subunit alpha' OS=Bos taurus GN=C... [more]
CSK22_CHICK2.652e-3266.32Casein kinase II subunit alpha' OS=Gallus gallus P... [more]
CSK2A_CAEEL3.464e-3265.26Casein kinase II subunit alpha OS=Caenorhabditis e... [more]
CSK22_HUMAN5.908e-3265.26Casein kinase II subunit alpha' OS=Homo sapiens GN... [more]
CSK21_MOUSE5.908e-3266.67Casein kinase II subunit alpha OS=Mus musculus GN=... [more]
CSK2A_DICDI9.761e-2762.07Casein kinase II subunit alpha OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004554_E11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935535 ID=CK935535; Name=CK935535; organism=Citrus sinensis; type=EST; length=577bp
GGGCAACCATGATCAGCTTGTCAAAATTGCCAAGGTACTGGGAACTGATG
AGTTAAATGCATATCTGAACAAATATCATTTAGAGCTTGATCCTCAACTC
GATGCACTTGTTGGGAGGCACAGCCGGAAGCCATGGTCAAAATTTATTAA
TGCTGATAATCAGCATCTGGTTTCTCCAGAGGCAATCGATTTTCTTGATA
AGCTCCTCCGTTATGATCACCAGGATAGGCTAACTGCTAGGGAGGCAATG
GCCCATCCATATTTCGCACAAGTGAGGGCTGCTGAGAGTAGCAGGACCCG
CGCGTAGCAGCCTGCCTCATGGAGTTCCTATCCGAACTGAATTCCTTATC
ATTGTTCAAATGATATGTATCGTGCTTATAACTGTTTGATCAAATTGCTC
AAGTTTGTGCTTGCGTGTGTCTTTTTGTTTTCAGTTTTTACCCTTGTGCC
TGCTTCTTGAGGAAGAACTAAATGAGAAAGCAAGAATGCCATGTCCTCTT
CTTTTCTTTAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAACAAGGAGGA
AAAAAAAAAAAAAAAAAAAAAAAAAAA
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