CK935535

Overview
NameCK935535
Unique NameCK935535
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: CSK2A_SCHPO (Casein kinase II subunit alpha OS=Schizosaccharomyces pombe GN=cka1 PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 1.665e-26
Identity = 54/87 (62.07%), Postives = 70/87 (80.46%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 265
            N+DQLVKIAKVLGTDEL AY+ KY + LD Q D ++G++ ++ W  F+N DN+ L + EAID L++LLRYDHQ+RLT +EAMAHPYF
Sbjct:  242 NYDQLVKIAKVLGTDELFAYVQKYQIVLDRQYDNILGQYPKRDWYSFVNRDNRSLANDEAIDLLNRLLRYDHQERLTCQEAMAHPYF 328          
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: CSK2A_THEPA (Casein kinase II subunit alpha OS=Theileria parva GN=TP04_0659 PE=3 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 4.844e-26
Identity = 50/91 (54.95%), Postives = 70/91 (76.92%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 277
            N+DQLVKIAKVLGT++L+ Y  KY L+  P    ++G HS+KPW+KF++ +NQHLVSPE +D LD++L YDH  R+T  EAM HP+F +++
Sbjct:  254 NYDQLVKIAKVLGTEDLHRYFEKYGLKFAPAYQEILGNHSKKPWTKFVHHENQHLVSPEVMDLLDRMLVYDHTKRITPLEAMEHPFFNEIK 344          
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: CSK2A_THEAN (Casein kinase II subunit alpha OS=Theileria annulata GN=TA10630 PE=3 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 4.844e-26
Identity = 50/91 (54.95%), Postives = 70/91 (76.92%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 277
            N+DQLVKIAKVLGT++L+ Y  KY L+  P    ++G HS+KPW+KF++ +NQHLVSPE +D LD++L YDH  R+T  EAM HP+F +++
Sbjct:  254 NYDQLVKIAKVLGTEDLHRYFEKYGLKFAPAYQEILGNHSKKPWTKFVHHENQHLVSPEVMDLLDRMLVYDHTKRITPLEAMEHPFFNEIK 344          
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: Y6481_DICDI (Probable serine/threonine-protein kinase DDB_G0286481 OS=Dictyostelium discoideum GN=DDB_G0286481 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.783e-20
Identity = 46/87 (52.87%), Postives = 62/87 (71.26%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 265
            N+DQL+KI KVLGTD+L  +L+K+ L L  +  +L+    +  W +FI  +N  +  P+AIDFLDKLLRYD  +RLTA+EAM HPYF
Sbjct:  511 NNDQLLKIVKVLGTDDLFNFLDKFGLSLTDEQSSLIKPRQKSNWERFIPYENDDIAQPDAIDFLDKLLRYDPTERLTAKEAMKHPYF 597          
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: CSK21_YEAST (Casein kinase II subunit alpha OS=Saccharomyces cerevisiae GN=CKA1 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.783e-20
Identity = 51/92 (55.43%), Postives = 65/92 (70.65%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLV-SPEAIDFLDKLLRYDHQDRLTAREAMAHPYFAQVR 277
            N DQLVKI KVLGT +   YL KY + L P+    + ++ RKPW +FIN  N+HL  + E ID +D LLRYDHQ+RLTA+EAM HP+FA +R
Sbjct:  277 NTDQLVKIVKVLGTSDFEKYLLKYEITL-PREFYDMDQYIRKPWHRFINDGNKHLSGNDEIIDLIDNLLRYDHQERLTAKEAMGHPWFAPIR 367          
BLAST of CK935535 vs. ExPASy Swiss-Prot
Match: CSK22_YEAST (Casein kinase II subunit alpha' OS=Saccharomyces cerevisiae GN=CKA2 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.278e-18
Identity = 46/87 (52.87%), Postives = 60/87 (68.97%), Query Frame = 2
Query:    5 NHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 265
            N DQLVKIA VLGT EL  YL KY L L  + D ++   ++K W+ FI ++ + L  PE +D +D LLRYDHQ+RLTA+EAM H +F
Sbjct:  249 NPDQLVKIATVLGTKELLGYLGKYGLHLPSEYDNIMRDFTKKSWTHFITSETK-LAVPEVVDLIDNLLRYDHQERLTAKEAMDHKFF 334          
The following BLAST results are available for this feature:
BLAST of CK935535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
CSK2A_SCHPO1.665e-2662.07Casein kinase II subunit alpha OS=Schizosaccharomy... [more]
CSK2A_THEPA4.844e-2654.95Casein kinase II subunit alpha OS=Theileria parva ... [more]
CSK2A_THEAN4.844e-2654.95Casein kinase II subunit alpha OS=Theileria annula... [more]
Y6481_DICDI1.783e-2052.87Probable serine/threonine-protein kinase DDB_G0286... [more]
CSK21_YEAST1.783e-2055.43Casein kinase II subunit alpha OS=Saccharomyces ce... [more]
CSK22_YEAST1.278e-1852.87Casein kinase II subunit alpha' OS=Saccharomyces c... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004554_E11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935535 ID=CK935535; Name=CK935535; organism=Citrus sinensis; type=EST; length=577bp
GGGCAACCATGATCAGCTTGTCAAAATTGCCAAGGTACTGGGAACTGATG
AGTTAAATGCATATCTGAACAAATATCATTTAGAGCTTGATCCTCAACTC
GATGCACTTGTTGGGAGGCACAGCCGGAAGCCATGGTCAAAATTTATTAA
TGCTGATAATCAGCATCTGGTTTCTCCAGAGGCAATCGATTTTCTTGATA
AGCTCCTCCGTTATGATCACCAGGATAGGCTAACTGCTAGGGAGGCAATG
GCCCATCCATATTTCGCACAAGTGAGGGCTGCTGAGAGTAGCAGGACCCG
CGCGTAGCAGCCTGCCTCATGGAGTTCCTATCCGAACTGAATTCCTTATC
ATTGTTCAAATGATATGTATCGTGCTTATAACTGTTTGATCAAATTGCTC
AAGTTTGTGCTTGCGTGTGTCTTTTTGTTTTCAGTTTTTACCCTTGTGCC
TGCTTCTTGAGGAAGAACTAAATGAGAAAGCAAGAATGCCATGTCCTCTT
CTTTTCTTTAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAACAAGGAGGA
AAAAAAAAAAAAAAAAAAAAAAAAAAA
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