CK935545
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935545 vs. ExPASy Swiss-Prot
Match: FB280_ARATH (Putative F-box protein At5g42430 OS=Arabidopsis thaliana GN=At5g42430 PE=4 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.079e-12 Identity = 58/241 (24.07%), Postives = 111/241 (46.06%), Query Frame = 2 Query: 35 NYNVSMEDLPLPILVDVFSRLPIKTILQIKCVCKTWHSLCSDPYFAKIHLARAPFSIMILEKFCK----RIYT----------NSLVPLFTLNQGDKERLSLLSSCNGLICLHE-FSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTN--TWRNIGDLPYVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQFR 706 N + + +P+ +++++ SRLP K+I + CV K W S+ PYF ++ L + +L F K R ++ +S V + + L++ + +GL+ + K D+I CNP G + +LP+L TR F ++ Q+KV+ + ++ + + T+GT WR I P + + +N AL++ A++ D ++ FD+ E+F+ Sbjct: 2 NGEENSDSIPIDLILEILSRLPAKSITRFHCVSKLWGSMLCRPYFNELFLTISSARPRLLFAFSKHGEWRFFSSPQPQNPYGKSSFVATADFHTKFSQNLNICNYTSGLVYFSAMWITKADVI--CNPSTGHYAMLPKLLLTYGETR-SFFLFDPVGKQFKVLLMNKIN-----NNETKDIHILTLGTRKVRWRKIQQCPLIHIVSHEWICINGALYYIAYNIDDFLGYIVCFDVRSEKFK 234
BLAST of CK935545 vs. ExPASy Swiss-Prot
Match: FB145_ARATH (Putative F-box protein At3g16210 OS=Arabidopsis thaliana GN=At3g16210 PE=4 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11 Identity = 68/283 (24.03%), Postives = 128/283 (45.23%), Query Frame = 2 Query: 59 LPLPILVDVFSRLPIKTILQIKCVCKTWHSLCSDPYFAKIHLARAPFSIM--------ILEKFCKR-IYTNSLVPLFTLNQGDKERLSLLSSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWRNIGDLPYV--LNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISVGVSGGFLYLCD-GFLEPNLDIWIMKRYGVKESWTK 871 LP + +++ RL +K + + +CVCKTW L +DP F + + +P + +L+ K + TN L F L+Q + + + C+G +C+ + K + V NP ++P + I GFGY+ + YKV+ ++ D+ +S++ V T +W + Y + G FL+ L+W A+ +C F+L ++R+ P P + + S +GV+ L + + + + I +M++ G SW+K Sbjct: 5 LPEELAIEILVRLSMKDLARFRCVCKTWRDLINDPGFTETYRDMSPAKFVSFYDKNFYMLDVEGKHPVITNKLD--FPLDQSMIDESTCVLHCDGTLCV---TLKNHTLMVWNPFSKQFKIVPN-PGIYQDSNILGFGYDPVHDDYKVV---TFIDRLDVSTA----HVFEFRTGSWGESLRISYPDWHYRDRRGTFLDQYLYWIAYRSSADRFILC-FNLSTHEYRKLPLPVYNQ-----GVTSSWLGVTSQKLCITEYEMCKKEIRISVMEKTG---SWSK 265
BLAST of CK935545 vs. ExPASy Swiss-Prot
Match: FB34_ARATH (Putative F-box protein At1g33530 OS=Arabidopsis thaliana GN=At1g33530 PE=4 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.521e-11 Identity = 68/297 (22.90%), Postives = 120/297 (40.40%), Query Frame = 2 Query: 56 DLPLPILVDVFSRLPIKTILQIKCVCKTWHSLCSDPYFAKIH--LARAPFSIMILEKFCKRIYTNSLVPLF--------TLNQGDKERLSLLSSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWR----NIGDLPY--VLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISVGVSGGFLY-------LCDGFLEPNLD--IWIMKRYGVKESWTK 871 +LP ++ ++ RLP+K ++++K + K W SL + A+ H L + + ++ +R + S+ F +N + L + SCNGL+C++E I + NP+ G L + ++ GFG + T YKV+ + + + V + TN WR G +P + F+N +L W S M DL E+FR P + V VS G++Y LC + L +W++ + + E W + Sbjct: 96 ELPDVLVEEILQRLPVKYLVRLKSISKGWKSLIESDHLAEKHLRLLEKKYGLKEIKITVERSTSKSICIKFFSRRSGMNAINSDSDDLLRVPGSCNGLVCVYELD--SVYIYLLNPMTGVTRTLTPPRGTKLSV---GFGIDVVTGTYKVMVLYGFDRVGTV--------VFDLDTNKWRQRYKTAGPMPLSCIPTPERNPVFVNGSLFWLLASDFSEILVM---DLHTEKFRTLSQPNDMD----------DVDVSSGYIYMWSLEDRLCVSNVRQGLHSYVWVLVQDELSEKWER 366
BLAST of CK935545 vs. ExPASy Swiss-Prot
Match: FBW1_ARATH (F-box/WD-40 repeat-containing protein 1 OS=Arabidopsis thaliana GN=FBW1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.292e-11 Identity = 67/291 (23.02%), Postives = 124/291 (42.61%), Query Frame = 2 Query: 59 LPLPILVDVFSRLPIKTILQIKCVCKTWHSLCSDPYFAKIHLA-------RAPFSIMILEKFCKRIYTNSLVPLFTLNQGDKERLSLLSSCNG-LICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCT-NQYKVIQ----ILSYKDQAAISSSKPQVEVHTIGTNTWRNIG-DLPYVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISVGVSGGFLYLCDGFLEPNLDIWIMKRY--GVKESWTKEFVI 883 LP + ++ R+P K++L++K CK W +L +D F HLA R + I+ + SL F + K + + C+G L+C+ ++ ++V NP L + L G GY+ + + YK+++ + + + A S KP+V+++ + +N+W+ L + + G L ++W A + K F+ SF+ E F P R Y+ + ++S L +D+W+ + GV WTK F + Sbjct: 38 LPFELFEEILCRVPTKSLLRLKLTCKRWLALFNDKRFIYKHLALVREHIIRTNQMVKIINPVVGACSSFSLPNKFQV----KGEIYTMVPCDGLLLCI----FETGSMAVWNPCLNQVRWIFLLNPSFRGCSCYGIGYDGLSRDSYKILRFVNGVFTKNEYANTGSYKPEVDIYELKSNSWKTFKVSLDWHVVLRCKGLSLKGNMYWIAKWNRKPDIFIQSFNFSTETFEPLCSLPVR-YD-VHNVVALSAFKGDNLSLLHQSKETSKIDVWVTNKVKNGVSILWTKLFSV 318
BLAST of CK935545 vs. ExPASy Swiss-Prot
Match: FB57_ARATH (Putative F-box protein At1g53550 OS=Arabidopsis thaliana GN=At1g53550 PE=4 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.292e-11 Identity = 54/238 (22.69%), Postives = 109/238 (45.80%), Query Frame = 2 Query: 53 EDLPLPILVDVFSRLPIKTILQIKCVCKTWHSLCSDPYFAKIHLARAPFS--IMILEKFCKRIYTNSLVPLFTLNQGDKERLSLLSS-----------CNGLICLHEFSYKQDIISVCNPILGDHLVLP-----QLKRKNVATRIR-GFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWRNIG--DLPYVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQF 703 + +P+ +++++ SRL ++ I + +CV K W S+ P + ++ ++ + ++ + K + ++ NS F N SL + +GLIC + NP G+++ LP ++ + + ++R FGY+ Q+KV++I + SS+ QV G +WRN + Y+L G +N L++ A +++ +C FD+ E+F Sbjct: 33 DPIPVDLVINILSRLSLECIARCRCVSKLWSSIIRRPNYNQLFPVKSSATPRLLFVFKVARELFFNSSPQHFNPNNSSLVATSLQKTSSTRFSQLCRPVHGLICSQHIEENYLFALISNPTTGEYIALPKQRMEEMNSETIIEKVRYSFGYDPIDKQFKVLRITWLHRGSHEWSSEYQVLTLGFGNISWRNTQCCVVHYLLEDS--GICINGVLYYPARLDNRKYTIVC-FDVMTEKF 267
BLAST of CK935545 vs. ExPASy Swiss-Prot
Match: FB55_ARATH (F-box protein At1g52490 OS=Arabidopsis thaliana GN=At1g52490 PE=4 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.292e-11 Identity = 71/296 (23.99%), Postives = 134/296 (45.27%), Query Frame = 2 Query: 59 LPLPILVDVFSRLPIKTILQIKCVCKTWHSLCSDPY-FAKIHLARA---PFSIMILEKFCKRIYTNSLVPLFTLNQGDKERLSLLSSCN-----------GLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRG---FGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTN--TWRNI-GDLPY-VLNQPYYGAFLNSALHWYA----HSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISVGVSGGFLYLCDGFLEPNLDIWIMKRYGVKESWT 868 LPL ++V++ +LP K++++ +CV K W + S F + +AR+ P + + F + T +Q K ++S++ N G IC Y D++++ NP L LP+++ ++ + FGY+H N+YKV+ +++ D ++ + V T+G + WR I G++ Y +++ G ++ +++ A + + FM SFD+ E+F P T KC + G C E N+ +WIM+ K+ W+ Sbjct: 55 LPLDLIVEILKKLPTKSLMRFRCVSKPWSFIISKRRDFVESIMARSLRQPPHKLPVFIFHQCDPGTFFTVSSTFSQSTKPKVSIMPGRNHYNAFRYQYVRGFICCSSSVY--DLVTIYNPTTRQCLPLPKIESMVLSPKRHKHCYFGYDHVMNEYKVLAMVN--DSQELTQT---FHVFTLGRDCPQWRKIRGNIDYELISVSRAGVCIDGTIYYVAVRRKDNENYGELFMMSFDVKSERFYHVRTPETLWSPKCTERGLFNHQGKLG----CISSNENNISMWIMEN-AEKQEWS 338
BLAST of CK935545 vs. ExPASy Swiss-Prot
Match: FB112_ARATH (F-box protein At2g17830 OS=Arabidopsis thaliana GN=At2g17830 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11 Identity = 75/319 (23.51%), Postives = 133/319 (41.69%), Query Frame = 2 Query: 50 MEDLPLPILVDVFSRLPIKTILQIKCVCKTWHSLCSDPYFAKIHLARA--------PFSIMILEKFCKRIYT------NSLVPLFT-----------LNQGDKERLSLLSSCNG-LICL-HEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKP-----QVEVHTIGTNTWRNIGDL--PYVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQF---RQFPGPPTREYEKCRPINSISVGVSG-GFLYLCDGFLEPNLDIWIMKRYGVKE-SWTKEFVIVN 889 M DLP +L ++ SR+P+ ++ ++ CK W+ L D F K + A F ++++ F R+Y N + P FT NQ + +S + C+G L+C+ + +++ + V NP G + Q + I GY+ N +IL KDQ S P + E+++ +N+W+ + D+ + ++ + G + +WYA F+ FD E+F P T + + SVG L+ D L ++IW+ + E W K F+ V+ Sbjct: 4 MSDLPRDLLAEILSRVPLASLRSVRFTCKKWNDLSKDRSFLKKQIVEAKKKQLKSKEFEVIMMRNF--RVYLTSVDLHNDVNPSFTPKGTLTSFSDDANQHQVDNVSSVFHCDGLLLCITKDLNFR---LVVWNPYFGQTRWI-QPRNSYHIKDIYAIGYDENKNH----KILRLKDQYYDYDSHPRARICEFELYSFESNSWKVVLDVSPDWYIHSYHRGLSVKGNTYWYATEKHGYVNFLICFDFTTEKFGPRLPLPFNATESFTYDDVVTLSSVGEEQLALLFQSDATL--MMEIWVTSKVDPTEVLWNKLFLAVD 310
BLAST of CK935545 vs. ExPASy Swiss-Prot
Match: DOR_ARATH (F-box protein DOR OS=Arabidopsis thaliana GN=DOR PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11 Identity = 59/248 (23.79%), Postives = 111/248 (44.76%), Query Frame = 2 Query: 47 SMEDLPLPILVDVFSRLPIKTILQIKCVCKTWHSLCSDPYFAKIHLARA---PFSIMILEKFCKRIY------------TNSLVPLFTLNQGDKERLSLLSSCNGLI------CLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQIL----SYKDQAAISSSKPQVEVHTIGTN--TWRNIG-DLPYVLNQPYYGAFLNSALHWYAHSH-DKRTAFMCSFDLGDEQF 703 + E +P+ +++++FSR P+K+I + +CV K W S+ PYF +++L ++ P + +K + + ++ L F + R +++S GL+ L + + ++CNP G L LP+ K + FGY+ Q+KV+ + YK+ + T+GT +WR I +P+V G +N L++ A + T + FD+ E+F Sbjct: 21 NFEPIPIDLVIEIFSRSPVKSIARCRCVSKLWASILRLPYFTELYLTKSCARPRLLFACQKHRELFFFSTPQPHNPNESSSPLAASFHMKIPFDGRFNIISPIGGLVFVRYEQILKGRKTPEFVSAICNPSTGQSLTLPKPKTRKRIWGTSHFGYDPIEKQFKVLSMNIGDGVYKEHYVL----------TLGTENLSWRRIECSIPHVHGSK--GICINGVLYYRAKADMFSGTLMIVCFDVRFEKF 256 The following BLAST results are available for this feature:
BLAST of CK935545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935545 ID=CK935545; Name=CK935545; organism=Citrus sinensis; type=EST; length=890bpback to top |