CK935555
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935555 vs. ExPASy Swiss-Prot
Match: RUVB2_ASHGO (RuvB-like helicase 2 OS=Ashbya gossypii GN=RVB2 PE=3 SV=1) HSP 1 Score: 330.487 bits (846), Expect = 7.659e-90 Identity = 171/260 (65.77%), Postives = 203/260 (78.08%), Query Frame = 3 Query: 93 GLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRIKXXXXXXXXXXXXXQIDRPATSXXXXXXXXXXXXXXEMETVYDLGGKMIEALGKEKVQSGDVIAIDKVSGKITKLGRSFSRSRDYDAMGPHTKFVQCPDGELQKRKEVVHCVTLREIDVINSRTQGFLAPFTGDTGEIRAEVREQIDTKVAEWREEGK 872 GLGLD +L+ + S+GMVGQL AR+AAGVIL+M++ G IAGRAVL+AG P TGKTA+AMG+++SLG + PF ++ SEIFSLE+SKTEAL QAFRK+IGV+IK QIDR T +MET+Y+LG KMI+ L KEKV +GDVI+IDK GKITKLGRSF+RSRDYDAMGP TKFVQCP+GELQKRK VVH V+L EIDVINSRTQGFLA FTGDTGEIR+E R+QI+TKVAEW+EEGK Sbjct: 27 GLGLDENLQPKPSSQGMVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGLSQSLGADVPFTAMAGSEIFSLELSKTEALTQAFRKSIGVKIKEDTELIEGEVVEIQIDRSITGGHKQGKLTIKTT--DMETIYELGNKMIDGLTKEKVLAGDVISIDKACGKITKLGRSFARSRDYDAMGPDTKFVQCPEGELQKRKSVVHTVSLHEIDVINSRTQGFLALFTGDTGEIRSEDRDQINTKVAEWKEEGK 284
BLAST of CK935555 vs. ExPASy Swiss-Prot
Match: RUVB2_CRYNE (RuvB-like helicase 2 OS=Cryptococcus neoformans GN=RVB2 PE=3 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 6.860e-89 Identity = 166/260 (63.85%), Postives = 200/260 (76.92%), Query Frame = 3 Query: 93 GLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRIKXXXXXXXXXXXXXQIDRPATSXXXXXXXXXXXXXXEMETVYDLGGKMIEALGKEKVQSGDVIAIDKVSGKITKLGRSFSRSRDYDAMGPHTKFVQCPDGELQKRKEVVHCVTLREIDVINSRTQGFLAPFTGDTGEIRAEVREQIDTKVAEWREEGK 872 GLGLDS+LE R S+GM+GQ ARKAAGVIL+M++EG+IAGRA+L+AG P TGKTA+AM M ++LG + PF M++ASE+FSLE+SKTE+L QAFR+AIGVRIK Q+DR T +METVYDLG KMI+ L KEKV +GDV++IDK SG+I+KLGRSF R++DYDAMG T+FV CPDGELQ RKEVVH V+L EIDVINSRTQGFLA F GDTGEI+ E+R QI+ KVAEWREEGK Sbjct: 29 GLGLDSNLEPRASSQGMIGQGKARKAAGVILKMVQEGRIAGRAILMAGPPSTGKTALAMAMTQTLGSDVPFVMLTASEVFSLEISKTESLTQAFRRAIGVRIKEETELIEGEVVEIQVDRSVTGATKTGRLTLKTT--DMETVYDLGSKMIDQLQKEKVLAGDVVSIDKASGRISKLGRSFGRAKDYDAMGADTRFVACPDGELQTRKEVVHTVSLHEIDVINSRTQGFLALFAGDTGEIKPELRAQINGKVAEWREEGK 286 HSP 2 Score: 28.4906 bits (62), Expect = 6.860e-89 Identity = 11/20 (55.00%), Postives = 16/20 (80.00%), Query Frame = 1 Query: 28 LKLSESRDLTRIERIGAHSH 87 L+ + RD+T++ERIG HSH Sbjct: 7 LQPTSMRDVTKMERIGVHSH 26
BLAST of CK935555 vs. ExPASy Swiss-Prot
Match: RUVB2_YARLI (RuvB-like helicase 2 OS=Yarrowia lipolytica GN=RVB2 PE=3 SV=2) HSP 1 Score: 319.701 bits (818), Expect = 1.352e-86 Identity = 166/261 (63.60%), Postives = 206/261 (78.93%), Query Frame = 3 Query: 93 GLGLD-SSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRIKXXXXXXXXXXXXXQIDRPATSXXXXXXXXXXXXXXEMETVYDLGGKMIEALGKEKVQSGDVIAIDKVSGKITKLGRSFSRSRDYDAMGPHTKFVQCPDGELQKRKEVVHCVTLREIDVINSRTQGFLAPFTGDTGEIRAEVREQIDTKVAEWREEGK 872 GLGL+ +SL ++ ++GMVGQ+ AR+AA V+LQMIK+GKIAGR+VL+AG P TGKTAIAMG+++SLG + PF ++ SEI+SLE+SKTEAL QAFRK+IGVRIK QIDR + +MET+YDLG KMI++L EKV +GDVI+IDK SG+ITKLGRSF+R+RDYDA+G TKFVQCP+GELQ+RKEV+H V+L EIDVINSR+QGFLA F+GDTGEIR EVREQI+TKVAEW+EEGK Sbjct: 26 GLGLEPNSLTPKENAQGMVGQVKARRAAAVVLQMIKDGKIAGRSVLLAGPPSTGKTAIAMGISQSLGSDVPFTSLAGSEIYSLELSKTEALNQAFRKSIGVRIKETTDIIEGEVVEIQIDRSLSGGHKQGKLTIKTT--DMETIYDLGHKMIDSLSNEKVTAGDVISIDKASGRITKLGRSFARARDYDALGADTKFVQCPEGELQQRKEVIHTVSLHEIDVINSRSQGFLALFSGDTGEIRPEVREQINTKVAEWKEEGK 284
BLAST of CK935555 vs. ExPASy Swiss-Prot
Match: RUVB2_ENCCU (RuvB-like helicase 2 OS=Encephalitozoon cuniculi GN=RVB2 PE=1 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 4.010e-46 Identity = 110/260 (42.31%), Postives = 157/260 (60.38%), Query Frame = 3 Query: 93 GLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRIKXXXXXXXXXXXXXQIDRPATSXXXXXXXXXXXXXXEMETVYDLGGKMIEALGKEKVQSGDVIAIDKVSGKITKLGRSFSRSRDYDAMGPHTKFVQCPDGELQKRKEVVHCVTLREIDVINSRTQGFLAPFTGDTGEIRAEVREQIDTKVAEWREEGK 872 GLG D E +G+VGQ+ ARKA VI +M++ K G+ VLI G G+GKTA+A+G++KSLG F IS +EI+SLEMSK+EA+ QA RK++G+RIK R +ME+ +++G KM L KEKV +GDVI I + G++ K+G S + D +G T+FV CP+GEL + E ++L +IDV+NS+ +G+LA F+G+TGEIRAE R++++ KV W EGK Sbjct: 20 GLGCDGD-EVEYDKDGLVGQIKARKAMAVIRKMVESNK-GGKVVLIKGDRGSGKTALAIGLSKSLG-GVHFNSISGTEIYSLEMSKSEAITQALRKSVGLRIKESVKVIEGEVVSLSGRRIVLKTV------------DMESSFEIGEKMRGELDKEKVSAGDVIRIVRERGRVYKIGTSMVKRSD--VVGTDTRFVPCPEGELIRITEETQEISLHDIDVVNSKAEGYLALFSGETGEIRAETRDEVNKKVWGWINEGK 262 HSP 2 Score: 21.9422 bits (45), Expect = 4.010e-46 Identity = 9/20 (45.00%), Postives = 11/20 (55.00%), Query Frame = 1 Query: 40 ESRDLTRIERIGAHSHFVVL 99 E RD+ + RI HSH L Sbjct: 2 EIRDVETVNRINLHSHIAGL 21
BLAST of CK935555 vs. ExPASy Swiss-Prot
Match: RUVB1_RAT (RuvB-like 1 OS=Rattus norvegicus GN=Ruvbl1 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 8.886e-38 Identity = 101/274 (36.86%), Postives = 150/274 (54.74%), Query Frame = 3 Query: 90 RGLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRI---KXXXXXXXXXXXXXQIDRPATSXXXXXXXXXXXXXXEMET-VYDLGGKMIEALGKEKVQSGDVIAIDKVSGKITKLGRSFSRSRDYDAMGPHTKFVQCPDGELQKRKEVVHCVTLREIDVINSRTQG----------FLAPFTGD-----TGEIRAEVREQIDTKVAE 854 +GLGLD S A+ + G+VGQ AR+A GVI+++IK K+AGRAVL+AG PGTGKTA+A+ +A+ LG + PF + SE++S E+ KTE LM+ FR+AIG+RI K + + P T L + E+L KE+V++GDVI I+ SG + + GR + + ++D ++V P G++ K+KE++ VTL ++DV N+R QG + P + GEI V + ID VAE Sbjct: 22 KGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEA--EEYVPLPKGDVHKKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGVAE 293
BLAST of CK935555 vs. ExPASy Swiss-Prot
Match: RUVB1_MOUSE (RuvB-like 1 OS=Mus musculus GN=Ruvbl1 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 8.886e-38 Identity = 101/274 (36.86%), Postives = 150/274 (54.74%), Query Frame = 3 Query: 90 RGLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRI---KXXXXXXXXXXXXXQIDRPATSXXXXXXXXXXXXXXEMET-VYDLGGKMIEALGKEKVQSGDVIAIDKVSGKITKLGRSFSRSRDYDAMGPHTKFVQCPDGELQKRKEVVHCVTLREIDVINSRTQG----------FLAPFTGD-----TGEIRAEVREQIDTKVAE 854 +GLGLD S A+ + G+VGQ AR+A GVI+++IK K+AGRAVL+AG PGTGKTA+A+ +A+ LG + PF + SE++S E+ KTE LM+ FR+AIG+RI K + + P T L + E+L KE+V++GDVI I+ SG + + GR + + ++D ++V P G++ K+KE++ VTL ++DV N+R QG + P + GEI V + ID VAE Sbjct: 22 KGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEA--EEYVPLPKGDVHKKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGVAE 293
BLAST of CK935555 vs. ExPASy Swiss-Prot
Match: RUVB1_HUMAN (RuvB-like 1 OS=Homo sapiens GN=RUVBL1 PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.161e-37 Identity = 100/274 (36.50%), Postives = 150/274 (54.74%), Query Frame = 3 Query: 90 RGLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRI---KXXXXXXXXXXXXXQIDRPATSXXXXXXXXXXXXXXEMET-VYDLGGKMIEALGKEKVQSGDVIAIDKVSGKITKLGRSFSRSRDYDAMGPHTKFVQCPDGELQKRKEVVHCVTLREIDVINSRTQG----------FLAPFTGD-----TGEIRAEVREQIDTKVAE 854 +GLGLD S A+ + G+VGQ AR+A GVI+++IK K+AGRAVL+AG PGTGKTA+A+ +A+ LG + PF + SE++S E+ KTE LM+ FR+AIG+RI K + + P T L + E+L KE+V++GDVI I+ SG + + GR + + ++D ++V P G++ K+KE++ VTL ++DV N+R QG + P + GEI V + ID +AE Sbjct: 22 KGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEA--EEYVPLPKGDVHKKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAE 293
BLAST of CK935555 vs. ExPASy Swiss-Prot
Match: RUVB1_DROPS (RuvB-like helicase 1 OS=Drosophila pseudoobscura pseudoobscura GN=pont PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.760e-37 Identity = 92/233 (39.48%), Postives = 136/233 (58.37%), Query Frame = 3 Query: 90 RGLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRI---KXXXXXXXXXXXXXQIDRPATSXXXXXXXXXXXXXXEMET-VYDLGGKMIEALGKEKVQSGDVIAIDKVSGKITKLGRSFSRSRDYDAMGPHTKFVQCPDGELQKRKEVVHCVTLREIDVINSRTQG 776 +GLGLD + A + G+VGQ AR+AAG+++ +IK K+AGRA+L+AG PGTGKTAIA+ +A+ LG + PF + SE+FS E+ KTE LM+ FR++IG+RI K + + P T L + +AL KEKV+ GDVI I+ SG + + GRS + + ++D ++V P G++ K+KEV+ VTL ++DV N+R QG Sbjct: 22 KGLGLDEAGSALQSAAGLVGQKAAREAAGIVVDLIKSKKMAGRALLLAGPPGTGKTAIALAIAQELGNKVPFCPMVGSEVFSNEIKKTEVLMENFRRSIGLRIRETKEVYEGEVTELTPVETENPMGGYGKTISNVVIGLKTAKGTKQLKLDPSIFDALQKEKVEVGDVIYIEANSGAVKRQGRSDTFATEFDL--ETEEYVPLPKGDVHKKKEVIQDVTLHDLDVANARPQG 252
BLAST of CK935555 vs. ExPASy Swiss-Prot
Match: RUVB1_YEAST (RuvB-like protein 1 OS=Saccharomyces cerevisiae GN=RVB1 PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 7.522e-37 Identity = 97/274 (35.40%), Postives = 153/274 (55.84%), Query Frame = 3 Query: 90 RGLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRI---KXXXXXXXXXXXXXQIDRPATSXXXXXXXXXXXXXXEMET-VYDLGGKMIEALGKEKVQSGDVIAIDKVSGKITKLGRSFSRSRDYDAMGPHTKFVQCPDGELQKRKEVVHCVTLREIDVINSRTQG----------FLAPFTGDTGEIRAEVREQIDTKVAEWREEG 869 +GLGLD S A+ V G VGQ+ AR+A GVI+ +IK K++GRA+L+AG P TGKTA+A+ +++ LG + PF + SE++S+E+ KTE LM+ FR+AIG+RI K + P T L + E++ +EKV GDVI I+ +G + ++GRS + + ++D ++V P GE+ K+KE+V VTL ++DV N+R QG L P EI ++R++++ VA++ ++G Sbjct: 31 KGLGLDESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLRLDPTIYESIQREKVSIGDVIYIEANTGAVKRVGRSDAYATEFDL--ETEEYVPLPKGEVHKKKEIVQDVTLHDLDVANARPQGGQDVISMMGQLLKP---KKTEITEKLRQEVNKVVAKYIDQG 299
BLAST of CK935555 vs. ExPASy Swiss-Prot
Match: RUVB1_XENLA (RuvB-like 1 OS=Xenopus laevis GN=ruvbl1 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 9.825e-37 Identity = 91/233 (39.06%), Postives = 137/233 (58.80%), Query Frame = 3 Query: 90 RGLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRI---KXXXXXXXXXXXXXQIDRPATSXXXXXXXXXXXXXXEMET-VYDLGGKMIEALGKEKVQSGDVIAIDKVSGKITKLGRSFSRSRDYDAMGPHTKFVQCPDGELQKRKEVVHCVTLREIDVINSRTQG 776 +GLGLD + A+ + G+VGQ AR+A GVI+++IK K+AGRAVL+AG PGTGKTA+A+ +A+ LG + PF + SE++S E+ KTE LM+ FR+AIG+RI K + + P T L + E+L KE+V+ GDVI I+ SG + + GRS + + ++D ++V P G++ ++KEV+ VTL ++DV N+R QG Sbjct: 22 KGLGLDENGIAKQAAAGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGNKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIRETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIYESLQKERVEVGDVIYIEANSGAVKRQGRSDTYATEFDLEA--EEYVPLPKGDVHQKKEVIQDVTLHDLDVANARPQG 252 The following BLAST results are available for this feature:
BLAST of CK935555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935555 ID=CK935555; Name=CK935555; organism=Citrus sinensis; type=EST; length=873bpback to top |