CK935560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935560 vs. ExPASy Swiss-Prot
Match: IF1A_DICDI (Eukaryotic translation initiation factor 1A OS=Dictyostelium discoideum GN=eif1a PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.428e-35 Identity = 71/98 (72.45%), Postives = 82/98 (83.67%), Query Frame = 1 Query: 136 DDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNE 429 +++KREL FKE+GQEYAQVLRMLGNGR EA C DG KRLCHI G++ KK WI GDIIL+ LRDYQ+DKADVIL+Y DEAR LK YGELPE+ R+NE Sbjct: 19 NEQKRELQFKEEGQEYAQVLRMLGNGRLEASCFDGEKRLCHISGRLRKKEWINNGDIILIQLRDYQNDKADVILRYNVDEARNLKTYGELPETARINE 116
BLAST of CK935560 vs. ExPASy Swiss-Prot
Match: IF1A_YEAST (Eukaryotic translation initiation factor 1A OS=Saccharomyces cerevisiae GN=TIF11 PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.595e-34 Identity = 66/111 (59.46%), Postives = 85/111 (76.58%), Query Frame = 1 Query: 130 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIAGGLDKEDD 462 ++D KREL++KE+GQEYAQ+ +MLGNGR EA C DG KR+ HIRGK+ KKVW+ GDIILV LRD+QDD+ DV+ KY DEAR LK GELPE+ ++NE G + ++D Sbjct: 18 DSDGPKRELIYKEEGQEYAQITKMLGNGRVEASCFDGNKRMAHIRGKLRKKVWMGQGDIILVSLRDFQDDQCDVVHKYNLDEARTLKNQGELPENAKINETDNFGFESDED 128
BLAST of CK935560 vs. ExPASy Swiss-Prot
Match: IF1A_SCHPO (Eukaryotic translation initiation factor 1A OS=Schizosaccharomyces pombe GN=tif11 PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 6.001e-34 Identity = 70/111 (63.06%), Postives = 84/111 (75.68%), Query Frame = 1 Query: 130 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIAGGLDKEDD 462 E ++EKREL + E+GQ YAQV +MLGNGR EA C DG KRL HIRGK+ KKVWI GDIIL+ LR++QD+K DVILKY DEAR LK GELPE+ ++NE G + EDD Sbjct: 18 ENENEKRELTYAEEGQMYAQVTKMLGNGRIEAACFDGVKRLGHIRGKLRKKVWINQGDIILLSLREFQDEKGDVILKYTADEARTLKNQGELPETAKINETDTFGAEGEDD 128
BLAST of CK935560 vs. ExPASy Swiss-Prot
Match: IF1A_NATPD (Translation initiation factor 1A OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=eif1a PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13 Identity = 38/95 (40.00%), Postives = 59/95 (62.11%), Query Frame = 1 Query: 133 ADDEKRELVFKEDGQE-YAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPES 414 +D+E R+ + +G E +A V MLG R + C+DGT+R I G+M K++WI D++LV D+QD+KADV+ +Y EA L+ G + +S Sbjct: 2 SDNEGRKNLRMPEGDEVFAVVTNMLGANRVKVRCMDGTERTARIPGRMQKRIWIREDDVVLVEPWDWQDEKADVVWRYEKQEADQLREEGHITDS 96
BLAST of CK935560 vs. ExPASy Swiss-Prot
Match: IF1A_METKA (Translation initiation factor 1A OS=Methanopyrus kandleri GN=eIF1A PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.839e-13 Identity = 39/104 (37.50%), Postives = 62/104 (59.62%), Query Frame = 1 Query: 136 DDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPES-TRLNEGIAGG 444 D+ +++ ++G+ + V +MLGN R + C+DG R+ I GKM K+VWI GD++LV ++Q ++ADV +Y + LK G+L E T+L E I G Sbjct: 7 DETLKKIRLPKEGEIFGVVEKMLGNDRVQVRCVDGKTRVARIPGKMRKRVWIREGDVVLVKPWEFQPERADVTWRYTRVQVDWLKRKGKLDERVTKLLEEIIPG 110
BLAST of CK935560 vs. ExPASy Swiss-Prot
Match: IF1A_HALMA (Translation initiation factor 1A OS=Haloarcula marismortui GN=eif1a PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 7.626e-13 Identity = 34/92 (36.96%), Postives = 55/92 (59.78%), Query Frame = 1 Query: 136 DDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPE 411 +D ++ L E+ + +A V+ MLG R + C+DG +R I GKM K++WI D++LV D+QD+KAD+ +Y +A L+ G + E Sbjct: 4 NDSRKNLRMPEEDEVFAVVMDMLGANRVKVRCMDGVERTARIPGKMQKRIWIREDDVVLVEPWDWQDEKADITWRYEKQDADQLREEGHIQE 95
BLAST of CK935560 vs. ExPASy Swiss-Prot
Match: IF1A_SULIY (Translation initiation factor 1A OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.219e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 1 Query: 148 RELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLL 387 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
BLAST of CK935560 vs. ExPASy Swiss-Prot
Match: IF1A_SULIN (Translation initiation factor 1A OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.219e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 1 Query: 148 RELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLL 387 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
BLAST of CK935560 vs. ExPASy Swiss-Prot
Match: IF1A_SULIM (Translation initiation factor 1A OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.219e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 1 Query: 148 RELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLL 387 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
BLAST of CK935560 vs. ExPASy Swiss-Prot
Match: IF1A_SULIL (Translation initiation factor 1A OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.219e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 1 Query: 148 RELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLL 387 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92 The following BLAST results are available for this feature:
BLAST of CK935560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935560 ID=CK935560; Name=CK935560; organism=Citrus sinensis; type=EST; length=742bpback to top |