CK935561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935561 vs. ExPASy Swiss-Prot
Match: IF1A_DICDI (Eukaryotic translation initiation factor 1A OS=Dictyostelium discoideum GN=eif1a PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.177e-35 Identity = 70/97 (72.16%), Postives = 81/97 (83.51%), Query Frame = 3 Query: 240 DDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLN 530 +++KREL FKE+GQEYAQVLRMLGNGR EA C DG KRLCHI G++ KK WI GDIIL+ LRDYQ+DKADVIL+Y DEAR LK YGELPE+ R+N Sbjct: 19 NEQKRELQFKEEGQEYAQVLRMLGNGRLEASCFDGEKRLCHISGRLRKKEWINNGDIILIQLRDYQNDKADVILRYNVDEARNLKTYGELPETARIN 115
BLAST of CK935561 vs. ExPASy Swiss-Prot
Match: IF1A_YEAST (Eukaryotic translation initiation factor 1A OS=Saccharomyces cerevisiae GN=TIF11 PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.682e-32 Identity = 63/99 (63.64%), Postives = 79/99 (79.80%), Query Frame = 3 Query: 234 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLN 530 ++D KREL++KE+GQEYAQ+ +MLGNGR EA C DG KR+ HIRGK+ KKVW+ GDIILV LRD+QDD+ DV+ KY DEAR LK GELPE+ ++N Sbjct: 18 DSDGPKRELIYKEEGQEYAQITKMLGNGRVEASCFDGNKRMAHIRGKLRKKVWMGQGDIILVSLRDFQDDQCDVVHKYNLDEARTLKNQGELPENAKIN 116
BLAST of CK935561 vs. ExPASy Swiss-Prot
Match: IF1A_SCHPO (Eukaryotic translation initiation factor 1A OS=Schizosaccharomyces pombe GN=tif11 PE=2 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 1.090e-31 Identity = 65/99 (65.66%), Postives = 78/99 (78.79%), Query Frame = 3 Query: 234 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLN 530 E ++EKREL + E+GQ YAQV +MLGNGR EA C DG KRL HIRGK+ KKVWI GDIIL+ LR++QD+K DVILKY DEAR LK GELPE+ ++N Sbjct: 18 ENENEKRELTYAEEGQMYAQVTKMLGNGRIEAACFDGVKRLGHIRGKLRKKVWINQGDIILLSLREFQDEKGDVILKYTADEARTLKNQGELPETAKIN 116
BLAST of CK935561 vs. ExPASy Swiss-Prot
Match: IF1A_NATPD (Translation initiation factor 1A OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=eif1a PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.983e-13 Identity = 38/95 (40.00%), Postives = 59/95 (62.11%), Query Frame = 3 Query: 237 ADDEKRELVFKEDGQE-YAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPES 518 +D+E R+ + +G E +A V MLG R + C+DGT+R I G+M K++WI D++LV D+QD+KADV+ +Y EA L+ G + +S Sbjct: 2 SDNEGRKNLRMPEGDEVFAVVTNMLGANRVKVRCMDGTERTARIPGRMQKRIWIREDDVVLVEPWDWQDEKADVVWRYEKQEADQLREEGHITDS 96
BLAST of CK935561 vs. ExPASy Swiss-Prot
Match: IF1A_HALMA (Translation initiation factor 1A OS=Haloarcula marismortui GN=eif1a PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 8.679e-13 Identity = 34/92 (36.96%), Postives = 55/92 (59.78%), Query Frame = 3 Query: 240 DDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPE 515 +D ++ L E+ + +A V+ MLG R + C+DG +R I GKM K++WI D++LV D+QD+KAD+ +Y +A L+ G + E Sbjct: 4 NDSRKNLRMPEEDEVFAVVMDMLGANRVKVRCMDGVERTARIPGKMQKRIWIREDDVVLVEPWDWQDEKADITWRYEKQDADQLREEGHIQE 95
BLAST of CK935561 vs. ExPASy Swiss-Prot
Match: IF1A_SULIY (Translation initiation factor 1A OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.525e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 3 Query: 252 RELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLL 491 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
BLAST of CK935561 vs. ExPASy Swiss-Prot
Match: IF1A_SULIN (Translation initiation factor 1A OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.525e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 3 Query: 252 RELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLL 491 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
BLAST of CK935561 vs. ExPASy Swiss-Prot
Match: IF1A_SULIM (Translation initiation factor 1A OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.525e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 3 Query: 252 RELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLL 491 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
BLAST of CK935561 vs. ExPASy Swiss-Prot
Match: IF1A_SULIL (Translation initiation factor 1A OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.525e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 3 Query: 252 RELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLL 491 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
BLAST of CK935561 vs. ExPASy Swiss-Prot
Match: IF1A_SULIK (Translation initiation factor 1A OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.525e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 3 Query: 252 RELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLL 491 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92 The following BLAST results are available for this feature:
BLAST of CK935561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935561 ID=CK935561; Name=CK935561; organism=Citrus sinensis; type=EST; length=805bpback to top |