CK935562

Overview
NameCK935562
Unique NameCK935562
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935562 vs. ExPASy Swiss-Prot
Match: KATG_ACIB3 (Catalase-peroxidase OS=Acinetobacter baumannii (strain AB307-0294) GN=katG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.216e-12
Identity = 59/180 (32.78%), Postives = 81/180 (45.00%), Query Frame = 3
Query:  168 NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 584
            N   L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTLG+ H
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of CK935562 vs. ExPASy Swiss-Prot
Match: KATG_PECCP (Catalase-peroxidase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=katG PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.537e-12
Identity = 72/245 (29.39%), Postives = 99/245 (40.41%), Query Frame = 3
Query:  180 LMLRIAWHSAGTYDVKT-KTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE--------------GRL-----------------------PDAKQGN-DHLR-----QVFGAQMGLSDKDIVALS-GGHTLGRCHKE-----------------------------------RSGFEGPWTRNPLIFDNSYFTELLTGE 671
            LM+R+AWHSAGTY     + GG  G  R A   +   N  LD A RLL P K+++   +S+ADL  LAG +  E  G     F  GR+D   P ++              GR                        P+   GN D LR     +V  ++M ++D++ VAL+ GGHT+G+ H                                      SG EG WT +P  +DN +F  LL  E
Sbjct:   92 LMIRMAWHSAGTYRTADGRGGGGTGNQRFAPLNSWPDNVSLDKARRLLWPIKKKYGNKLSWADLIILAGNIAYESMGLKTFGFAFGREDIWHPEKDIYWGSEKEWLAKSTGRYGSDDRTTLENPLAAVQMGLIYVNPEGVDGNPDPLRTAQDMRVTFSRMAMNDEETVALTAGGHTVGKTHGNGDASLLGKAPEGTDVGEQGLGWHNPTGSGKGRYTVTSGLEGAWTTHPTQWDNGFFHMLLNHE 336          
BLAST of CK935562 vs. ExPASy Swiss-Prot
Match: KATG_RHOPS (Catalase-peroxidase OS=Rhodopseudomonas palustris (strain BisB5) GN=katG PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.619e-12
Identity = 61/177 (34.46%), Postives = 80/177 (45.20%), Query Frame = 3
Query:  180 LMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ-----EGRL---------------------------PDAKQGN-------DHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 584
            LM+R+AWHSAGTY      GG   G  R A   +   N  LD A RLL P K+++   IS+ADLY L G V +E  G     F  GR D  EP +     EG                             P+   GN         +R+ F A+M ++D++ VAL +GGHT G+ H
Sbjct:   91 LMIRMAWHSAGTYRTTDGRGGAGAGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGNKISWADLYVLTGNVALESMGFKTFGFAGGRADTWEPEELFWGPEGSWLGDERYSGERQLHDALGAVQMGLIYVNPEGPNGNPDPVAAAKDIRETF-ARMAMNDEETVALIAGGHTFGKTH 266          
BLAST of CK935562 vs. ExPASy Swiss-Prot
Match: KATG_RHOPB (Catalase-peroxidase OS=Rhodopseudomonas palustris (strain BisB18) GN=katG PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.033e-12
Identity = 61/177 (34.46%), Postives = 80/177 (45.20%), Query Frame = 3
Query:  180 LMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ-----EGRL---------------------------PDAKQGN-------DHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 584
            L +R+AWHSAGTY      GG   G  R A   +   N  LD A RLL P K+++   IS+ADLY LAG V +E  G     F  GR D  EP +     EG                             P+   GN         +R+ F A+M ++D++ VAL +GGHT G+ H
Sbjct:   89 LFIRMAWHSAGTYRTTDGRGGAGAGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGQKISWADLYVLAGNVALESMGFQTFGFAGGRADTWEPEELFWGPEGTWLGDERYSGERQLADPLGAVQMGLIYVNPEGPNGNPDPLGSAKDIRETF-ARMAMNDEETVALIAGGHTFGKTH 264          
BLAST of CK935562 vs. ExPASy Swiss-Prot
Match: KATG_RHOP2 (Catalase-peroxidase OS=Rhodopseudomonas palustris (strain HaA2) GN=katG PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.033e-12
Identity = 61/177 (34.46%), Postives = 80/177 (45.20%), Query Frame = 3
Query:  180 LMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ-----EGRL---------------------------PDAKQGN-------DHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 584
            LM+R+AWHSAGTY      GG   G  R A   +   N  LD A RLL P K+++   IS+ADLY L G V +E  G     F  GR D  EP +     EG                             P+   GN         +R+ F A+M ++D++ VAL +GGHT G+ H
Sbjct:   91 LMVRMAWHSAGTYRTTDGRGGAGAGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGNKISWADLYVLTGNVALESMGFKTFGFAGGRADTWEPEELFWGPEGSWLGDERYSGERELSDPLGAVQMGLIYVNPEGPNGNPDPVAAAKDIRETF-ARMAMNDEETVALIAGGHTFGKTH 266          
BLAST of CK935562 vs. ExPASy Swiss-Prot
Match: KATG_NOCFA (Catalase-peroxidase OS=Nocardia farcinica GN=katG PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.033e-12
Identity = 61/182 (33.52%), Postives = 82/182 (45.05%), Query Frame = 3
Query:  168 NCAPLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE------------------------------GRL---PDAKQGND-------HLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 584
            N  PLM+R+AWHSAGTY      GG   G  R A   +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G     F  GR D  EP ++                              G +   P+   GN         ++  FG +MG++ ++ VAL +GGHT G+ H
Sbjct:   96 NYGPLMIRMAWHSAGTYRSSDGRGGANTGQQRFAPLNSWPDNGNLDKARRLLWPVKKKYGQNISWADLMILAGNVALETMGFKTFGFAGGRVDVWEPEEDVYWGPEAEWLGDKRYSGERDLENPLAAVQMGLIYVNPEGPNGNPDPLAAAVDIKDTFG-RMGMTVEETVALIAGGHTFGKTH 276          
BLAST of CK935562 vs. ExPASy Swiss-Prot
Match: KATG_STRGG (Catalase-peroxidase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=katG PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.879e-12
Identity = 62/181 (34.25%), Postives = 81/181 (44.75%), Query Frame = 3
Query:  168 NCAPLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP-------PQEGRLPDAK-QGNDHLRQVFGA-QMGL------------------------------SDKDIVAL-SGGHTLGRCH 584
            N  PLM+R+AWHSAGTY +    GG   G  R A   +   N  LD A RLL P K+++   +S+ADL  L G V +E  G     F  GR+D  E        P+   L D +  G+  L    GA QMGL                              +D++ VAL +GGHT G+ H
Sbjct:  111 NYGPLMIRMAWHSAGTYRISDGRGGAGAGQQRFAPLNSWPDNGNLDKARRLLWPVKKKYGQALSWADLLILTGNVALETMGFKTFGFAGGREDVWESEEDVYWGPETTWLDDERYTGDRELENPLGAVQMGLIYVNPEGPNGNPDPVAAARDIRETFRRMAMNDEETVALIAGGHTFGKTH 291          
BLAST of CK935562 vs. ExPASy Swiss-Prot
Match: KATG_NITWN (Catalase-peroxidase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=katG PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.879e-12
Identity = 71/237 (29.96%), Postives = 96/237 (40.51%), Query Frame = 3
Query:  180 LMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ-----EGR----------------------------------LPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH------------------------KER-----------SGFEGPWTRNPLIFDNSYFTEL 659
            LM+R+AWHSAGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADLY LAG   +E  G   + F  GR D+ EP +     EG                                    PD       +R+ F  +M ++D++ VAL +GGHT G+ H                        K R           SG E  WT+ P  +DN++F  L
Sbjct:   89 LMVRMAWHSAGTYRITDGRGGAGGGQQRFAPLNSWPDNVLLDRARRLLWPIKQKYGRKISWADLYVLAGNAALESMGFKPLGFAGGRVDEWEPQELFWGPEGAWLGDERYSGERELAEPLAAVQMGLIYVNPEGPNGQPDPLAAAKDIRETF-LRMAMNDEETVALIAGGHTFGKTHGAGDASLVGPVPDSAPIEDQGLGWKGRFGTGKGADAIGSGLEVTWTQTPTKWDNNFFDTL 324          
BLAST of CK935562 vs. ExPASy Swiss-Prot
Match: KATG_CHRSD (Catalase-peroxidase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=katG PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.879e-12
Identity = 69/247 (27.94%), Postives = 101/247 (40.89%), Query Frame = 3
Query:  180 LMLRIAWHSAGTYDVKT-KTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTG--------GPDIPFHPGRD-----------------------DKAEPP----QEGRL----------PDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH---------------------------KER--------SGFEGPWTRNPLIFDNSYFTELLTGE 671
            +  R+AWHSAG+Y +   + GG  G  R A   +   N   D   RLL P K+++   IS+ADL  L+G +  EV G        G +  +HP +D                       D  E P    Q G +          PD ++  + +R+ F A+M ++D++  AL +GGHT+G+CH                           K R        SG EG WT+NP  +D  +F  L   E
Sbjct:   85 MFARVAWHSAGSYRLADGRGGGGTGNQRFAPLNSWPDNVNTDKGRRLLWPIKKKYGNKISWADLMVLSGTIAYEVAGLKTYGFAFGREDIWHPEKDIYWGDEKEWLAPSDERYADVEKPDTMENPLAAVQMGLIYVNPEGVNGQPDPQKTAEQVRETF-ARMAMNDEETAALTAGGHTIGKCHGNGEAENLSAEPEAADVEYQGIGWMNTKGRGIGRDTVVSGIEGAWTKNPTQWDMGWFDMLFNHE 330          
BLAST of CK935562 vs. ExPASy Swiss-Prot
Match: PEM4_PHACH (Manganese peroxidase H4 OS=Phanerochaete chrysosporium PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.029e-11
Identity = 49/146 (33.56%), Postives = 69/146 (47.26%), Query Frame = 3
Query:  237 GGPFGTMRL--AAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGV-EVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFE-GPWTRNPLIFDNSYFTELL 662
            GG  G+M      E   SAN+G+D +V  L PF ++  TIS ADL Q AG V +    G P + F  GR +   P  EG +P+ +     + Q F      S  ++V+L   HT+ R  K     +  P+   P  FD   F E+L
Sbjct:   85 GGADGSMLHFPTIEPNFSANSGIDDSVNNLLPFMQKHDTISAADLVQFAGAVALSNCPGAPRLEFMAGRPNTTIPAVEGLIPEPQDSVTKILQRFEDAGNFSPFEVVSLLASHTVARADKVDETIDAAPFDSTPFTFDTQVFLEVL 230          
The following BLAST results are available for this feature:
BLAST of CK935562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
KATG_ACIB31.216e-1232.78Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_PECCP3.537e-1229.39Catalase-peroxidase OS=Pectobacterium carotovorum ... [more]
KATG_RHOPS4.619e-1234.46Catalase-peroxidase OS=Rhodopseudomonas palustris ... [more]
KATG_RHOPB6.033e-1234.46Catalase-peroxidase OS=Rhodopseudomonas palustris ... [more]
KATG_RHOP26.033e-1234.46Catalase-peroxidase OS=Rhodopseudomonas palustris ... [more]
KATG_NOCFA6.033e-1233.52Catalase-peroxidase OS=Nocardia farcinica GN=katG ... [more]
KATG_STRGG7.879e-1234.25Catalase-peroxidase OS=Streptomyces griseus subsp.... [more]
KATG_NITWN7.879e-1229.96Catalase-peroxidase OS=Nitrobacter winogradskyi (s... [more]
KATG_CHRSD7.879e-1227.94Catalase-peroxidase OS=Chromohalobacter salexigens... [more]
PEM4_PHACH1.029e-1133.56Manganese peroxidase H4 OS=Phanerochaete chrysospo... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004554_C11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_C11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935562 ID=CK935562; Name=CK935562; organism=Citrus sinensis; type=EST; length=838bp
GGGGGTGCTCTGCTCGTGCCACTCTCGTTTGTTAAGGATTTGCGTCTCTC
TTTCTCATTTCATTCAGCGTTGAAAAGATGACGAAGAATTACCCCACTGT
TAGCGAGGATTACAAGAAGGCCGTGGAGAAATGCAAGAGGAAGCTCAGAG
GCTTCATCGCTGAGAAGAACTGCGCTCCACTCATGCTCCGTATCGCGTGG
CACTCAGCTGGTACATATGATGTGAAGACCAAGACCGGAGGTCCATTCGG
AACCATGAGGCTCGCTGCTGAGCAGGCACACTCAGCCAACAACGGCCTCG
ATATTGCCGTTAGGCTTTTGGAGCCGTTCAAGGAGCAGTTCCCTACCATC
TCCTACGCTGACCTTTATCAGCTTGCTGGTGTTGTTGGCGTTGAGGTTAC
CGGTGGGCCCGATATCCCCTTCCACCCTGGAAGAGATGACAAGGCTGAGC
CACCTCAAGAAGGCCGGCTTCCTGATGCTAAACAGGGTAATGATCACTTG
AGGCAAGTCTTTGGTGCTCAGATGGGCCTCAGCGACAAGGATATTGTTGC
TCTCTCTGGTGGCCACACCCTGGGAAGGTGCCACAAGGAGAGGTCTGGAT
TTGAGGGACCATGGACCCGCAACCCTCTCATTTTTGACAATTCCTACTTC
ACGGAGCTCTTGACTGGTGAGAAGGATGGTCTTCTGCAATTGCCATCCGA
CAAGGCCCTTCTGGATGACCCTGTTTTCCGCCCTCTTGTTGAGAAATATG
CTGCGGATGAGGACGCTTTCTTCGCTGATTATGCTGAGGCTCATCTCAAG
CTCTCTGAGCTAGGATTTGNNNAAGCCTAAATTTACCT
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