CK935562

Overview
NameCK935562
Unique NameCK935562
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935562 vs. ExPASy Swiss-Prot
Match: KATG_SOLUE (Catalase-peroxidase OS=Solibacter usitatus (strain Ellin6076) GN=katG PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.755e-11
Identity = 63/176 (35.80%), Postives = 80/176 (45.45%), Query Frame = 3
Query:  180 LMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP------PQEGRLPDAK-QGNDHLRQVFGA-QMGL------------------------------SDKDIVAL-SGGHTLGRCH 584
            LM+R+AWHSAGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G     F  GR D  EP      P+   L D +  G   L +  GA QMGL                              +D++ VAL +GGHT G+ H
Sbjct:   99 LMIRMAWHSAGTYRITDGRGGAGAGQQRFAPLNSWPDNANLDKARRLLWPVKQKYGDKISWADLMVLAGNVALESMGFKTFGFAGGRSDVWEPEELYWGPEGTWLGDERYSGERQLSEPLGAVQMGLIYVNPEGPNGNPDPVAAAKDIRETFFRMAMNDEETVALIAGGHTFGKTH 274          
BLAST of CK935562 vs. ExPASy Swiss-Prot
Match: KATG_BORA1 (Catalase-peroxidase OS=Bordetella avium (strain 197N) GN=katG PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.755e-11
Identity = 59/155 (38.06%), Postives = 74/155 (47.74%), Query Frame = 3
Query:  177 PLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQ--GNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPL 629
            PL +R+AWHSAGTY V    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ L G V +E  G     F  GR+D  EP Q+    D K   G D        + G ++   VA   GH  G+ H    G  G    NPL
Sbjct:   84 PLFIRMAWHSAGTYRVGDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKKKYGNKISWADLFILTGNVALETMGFKTFGFGGGREDTWEPDQDVYWGDEKTWLGGD-------LRYGKNEAQPVADKAGH--GKEHGRTDG--GRNLENPL 227          
BLAST of CK935562 vs. ExPASy Swiss-Prot
Match: KATG_RHOP5 (Catalase-peroxidase OS=Rhodopseudomonas palustris (strain BisA53) GN=katG PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.994e-11
Identity = 61/176 (34.66%), Postives = 80/176 (45.45%), Query Frame = 3
Query:  180 LMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP------PQEGRLPDAK-QGNDHLRQVFGA-QMGL------------------------------SDKDIVAL-SGGHTLGRCH 584
            L +R+AWHSAGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ L+G V +E  G     F  GR D  EP      P+   L D++  G   L    GA QMGL                              +D++ VAL +GGHT G+ H
Sbjct:   90 LFIRLAWHSAGTYRISDGRGGAGAGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGNKISWADLFVLSGNVALESMGFKTFGFAGGRADTWEPEELYWGPEGTWLGDSRYSGERELSDPLGAVQMGLIYVNPEGPNGNPDPVGSAKDIRETFYRMAMNDEETVALIAGGHTFGKTH 265          
BLAST of CK935562 vs. ExPASy Swiss-Prot
Match: KATG_NOVAD (Catalase-peroxidase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=katG PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.994e-11
Identity = 69/243 (28.40%), Postives = 91/243 (37.45%), Query Frame = 3
Query:  177 PLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ-----------------EGRL---------------PDAKQGN-------DHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKER------------------------------------SGFEGPWTRNPLIFDNSYFTELLTGE 671
            P  +R+AWHSAGTY      GG   G  R     +   N  LD A RLL P K+++   IS+ADL  L G V +E  G     F  GR D  E  Q                 + +L               P+   GN         +R+ FG +M ++D++ VAL +GGHT G+ H  R                                    SG EG WT NP+ +   Y   L   E
Sbjct:  109 PFFIRMAWHSAGTYRTADGRGGAGGGQQRFEPLNSWPDNVNLDKARRLLWPIKQKYGRKISWADLMVLTGNVALESMGFKTFGFAGGRADDWEADQVFWGPENKWLADQRYHGDRKLQNPLAAVQMGLIYVNPEGPNGNPDPLLAAKDIRETFG-RMAMNDEETVALIAGGHTFGKAHGARKPEGCVGVDPAAGAVEDQGLGWNNKCGKGNAEDTVSSGLEGAWTANPIAWTTQYLDNLYAFE 350          
BLAST of CK935562 vs. ExPASy Swiss-Prot
Match: KATG3_MYCS2 (Catalase-peroxidase 3 OS=Mycobacterium smegmatis GN=katG3 PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.994e-11
Identity = 67/245 (27.35%), Postives = 92/245 (37.55%), Query Frame = 3
Query:  177 PLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDK---------------------------------------AEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH------------------------------------KERSGFEGPWTRNPLIFDNSYFTELLTGEKD 677
            PL+LR+AWH AGTY +    GG   G +R A   +   N  LD A RLL P K+++   IS++DL   AG   +E  G     F  GR+D                                         +P     LPD       +R+ F  +MG++D++ VAL +GGHT G+ H                                       SG +G WT  P  +D S+ T L   E D
Sbjct:   99 PLVLRMAWHFAGTYRIGDGRGGAGAGMLRFAPLNSFPDNRNLDKARRLLWPVKKKYGRKISWSDLMIFAGNRALESMGCRTFGFAGGREDAWEADETYWGPESTWLADERHSGVRDLDQPLAASEMGLIYVDPQGPATLPDPLASARDIRETF-RRMGMNDEETVALIAGGHTFGKSHGPTDPSRCLGPEPEGAPLEALGLGWVNSFGTGNGADTVTSGLDGIWTATPTKWDMSFLTTLFAYEWD 342          
BLAST of CK935562 vs. ExPASy Swiss-Prot
Match: PEM3_PHACH (Manganese peroxidase H3 OS=Phanerochaete chrysosporium PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.910e-11
Identity = 48/166 (28.92%), Postives = 76/166 (45.78%), Query Frame = 3
Query:  183 MLRIAWHSAGTYDVKT--KTGGPFGTMRL--AAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGV-EVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFE-GPWTRNPLIFDNSYFTELL 662
            ++R+ +H A           GG  G+M L    E   SANNG+D +V  L PF ++  TIS  D+ Q  G V +    G P + F   R +K  P  +G +P+ +     + + F      S  ++V+L   H++ R  K     +  P+   P +FD   F E+L
Sbjct:   65 VIRLTFHDAIAISQSKGPSAGGADGSMLLFPTIEPNFSANNGIDDSVNNLIPFMQKHNTISAGDIVQFTGAVALTNCPGAPQLEFLARRPNKTIPAIDGLIPEPQDSVTSILERFKDAGNFSPFEVVSLLASHSVARADKVDETIDAAPFDTTPFVFDTQIFLEVL 230          
BLAST of CK935562 vs. ExPASy Swiss-Prot
Match: KATG2_CELJU (Catalase-peroxidase 2 OS=Cellvibrio japonicus (strain Ueda107) GN=katG2 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.910e-11
Identity = 68/243 (27.98%), Postives = 92/243 (37.86%), Query Frame = 3
Query:  177 PLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP------PQEGRLPDAKQGNDH---------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH----------KE--------------------------RSGFEGPWTRNPLIFDNSYFTELLTGE 671
            P  +R+AWHSAGTY +    GG   G  R     +   N  LD A RLL P K+++  +IS+ADL  L G V +E  G     F  GR D  E       P++  L D +   D                                  +R  FG +M ++D++ VAL +GGHT G+ H          KE                           SG EG W+ NP+ +   Y   L   E
Sbjct:   99 PFFIRMAWHSAGTYRIYDGRGGAGGGQQRFEPLNSWPDNVNLDRARRLLWPIKQKYGSSISWADLMVLTGNVALESMGFKTFGFAGGRQDDWEADTVYWGPEKKWLDDKRYSGDRTLEKPLAAVQMGLIYVNPEGPNGVPDPLLAAKDIRDTFG-RMAMNDEETVALIAGGHTFGKAHGAHKPETCLGKEPAAAGIEEQGLGWTNKCGKGNAEDTITSGLEGAWSVNPIAWTTQYLDNLFAFE 340          
BLAST of CK935562 vs. ExPASy Swiss-Prot
Match: PEM2_PHLRA (Manganese peroxidase 2 OS=Phlebia radiata GN=mnp2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.107e-11
Identity = 47/146 (32.19%), Postives = 67/146 (45.89%), Query Frame = 3
Query:  237 GGPFGTMRL--AAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGV-EVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRC-HKERSGFEGPWTRNPLIFDNSYFTELL 662
            GG  G+M +    E A   N G+  +V  L PF  QFPTIS  DL Q AG V +    G P + F  GR +   P  +G +P+ +     +   F      S  ++VAL   H++ R  H + +    P+   P  FD   F E+L
Sbjct:   85 GGADGSMLIFPTVEPAFFPNLGIADSVNNLIPFLSQFPTISAGDLVQFAGAVAISNCPGAPQLEFLAGRPNATAPAIDGLIPEPQDDVTKILARFKDAGNFSPAEVVALLASHSIARADHVDPTLDAAPFDSTPFDFDTQIFLEVL 230          
BLAST of CK935562 vs. ExPASy Swiss-Prot
Match: KATG_LEPBP (Catalase-peroxidase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=katG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.711e-11
Identity = 68/239 (28.45%), Postives = 91/239 (38.08%), Query Frame = 3
Query:  177 PLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP------PQEGRLPDAK-QGNDHL--------------------------------RQVFGAQMGLSDKDIVAL-SGGHTLGRCHKE------------------------------------RSGFEGPWTRNPLIFDNSYFTEL 659
            P  +R+AWHSAGTY +    GG   G  R     +   N  LD A RLL P K+++   IS+ADL  L G V +E  G     F  GR D  E       P++  L D + +GN  L                                R+ FG +M ++D++ VAL +GGHT G+ H +                                     SG EG WT NP  +   Y   L
Sbjct:  102 PFFIRMAWHSAGTYRISDGRGGAGGGQQRFEPLNSWPDNANLDKARRLLWPIKKKYGKKISWADLMVLTGNVALESMGFKTYGFAGGRTDDWEADLVYWGPEKKFLEDQRYKGNRELKNPLAAVQMGLIYVNPEGPNGNPDPLAAAKDIRETFG-RMAMNDEETVALIAGGHTFGKAHGKSDPSKHVGKEPAAAGLEEQGFGWKNNYKKGNAEDTITSGLEGAWTANPTKWTTQYLNNL 339          
BLAST of CK935562 vs. ExPASy Swiss-Prot
Match: KATG_LEPBA (Catalase-peroxidase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=katG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.711e-11
Identity = 68/239 (28.45%), Postives = 91/239 (38.08%), Query Frame = 3
Query:  177 PLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP------PQEGRLPDAK-QGNDHL--------------------------------RQVFGAQMGLSDKDIVAL-SGGHTLGRCHKE------------------------------------RSGFEGPWTRNPLIFDNSYFTEL 659
            P  +R+AWHSAGTY +    GG   G  R     +   N  LD A RLL P K+++   IS+ADL  L G V +E  G     F  GR D  E       P++  L D + +GN  L                                R+ FG +M ++D++ VAL +GGHT G+ H +                                     SG EG WT NP  +   Y   L
Sbjct:  102 PFFIRMAWHSAGTYRISDGRGGAGGGQQRFEPLNSWPDNANLDKARRLLWPIKKKYGKKISWADLMVLTGNVALESMGFKTYGFAGGRTDDWEADLVYWGPEKKFLEDQRYKGNRELKNPLAAVQMGLIYVNPEGPNGNPDPLAAAKDIRETFG-RMAMNDEETVALIAGGHTFGKAHGKSDPSKHVGKEPAAAGLEEQGFGWKNNYKKGNAEDTITSGLEGAWTANPTKWTTQYLNNL 339          
The following BLAST results are available for this feature:
BLAST of CK935562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
KATG_SOLUE1.755e-1135.80Catalase-peroxidase OS=Solibacter usitatus (strain... [more]
KATG_BORA11.755e-1138.06Catalase-peroxidase OS=Bordetella avium (strain 19... [more]
KATG_RHOP52.994e-1134.66Catalase-peroxidase OS=Rhodopseudomonas palustris ... [more]
KATG_NOVAD2.994e-1128.40Catalase-peroxidase OS=Novosphingobium aromaticivo... [more]
KATG3_MYCS22.994e-1127.35Catalase-peroxidase 3 OS=Mycobacterium smegmatis G... [more]
PEM3_PHACH3.910e-1128.92Manganese peroxidase H3 OS=Phanerochaete chrysospo... [more]
KATG2_CELJU3.910e-1127.98Catalase-peroxidase 2 OS=Cellvibrio japonicus (str... [more]
PEM2_PHLRA5.107e-1132.19Manganese peroxidase 2 OS=Phlebia radiata GN=mnp2 ... [more]
KATG_LEPBP8.711e-1128.45Catalase-peroxidase OS=Leptospira biflexa serovar ... [more]
KATG_LEPBA8.711e-1128.45Catalase-peroxidase OS=Leptospira biflexa serovar ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004554_C11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_C11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935562 ID=CK935562; Name=CK935562; organism=Citrus sinensis; type=EST; length=838bp
GGGGGTGCTCTGCTCGTGCCACTCTCGTTTGTTAAGGATTTGCGTCTCTC
TTTCTCATTTCATTCAGCGTTGAAAAGATGACGAAGAATTACCCCACTGT
TAGCGAGGATTACAAGAAGGCCGTGGAGAAATGCAAGAGGAAGCTCAGAG
GCTTCATCGCTGAGAAGAACTGCGCTCCACTCATGCTCCGTATCGCGTGG
CACTCAGCTGGTACATATGATGTGAAGACCAAGACCGGAGGTCCATTCGG
AACCATGAGGCTCGCTGCTGAGCAGGCACACTCAGCCAACAACGGCCTCG
ATATTGCCGTTAGGCTTTTGGAGCCGTTCAAGGAGCAGTTCCCTACCATC
TCCTACGCTGACCTTTATCAGCTTGCTGGTGTTGTTGGCGTTGAGGTTAC
CGGTGGGCCCGATATCCCCTTCCACCCTGGAAGAGATGACAAGGCTGAGC
CACCTCAAGAAGGCCGGCTTCCTGATGCTAAACAGGGTAATGATCACTTG
AGGCAAGTCTTTGGTGCTCAGATGGGCCTCAGCGACAAGGATATTGTTGC
TCTCTCTGGTGGCCACACCCTGGGAAGGTGCCACAAGGAGAGGTCTGGAT
TTGAGGGACCATGGACCCGCAACCCTCTCATTTTTGACAATTCCTACTTC
ACGGAGCTCTTGACTGGTGAGAAGGATGGTCTTCTGCAATTGCCATCCGA
CAAGGCCCTTCTGGATGACCCTGTTTTCCGCCCTCTTGTTGAGAAATATG
CTGCGGATGAGGACGCTTTCTTCGCTGATTATGCTGAGGCTCATCTCAAG
CTCTCTGAGCTAGGATTTGNNNAAGCCTAAATTTACCT
back to top