CK935563
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935563 vs. ExPASy Swiss-Prot
Match: QCR1_BOVIN (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Bos taurus GN=UQCRC1 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.665e-14 Identity = 39/118 (33.05%), Postives = 69/118 (58.47%), Query Frame = 1 Query: 325 KTNISTLPNGVKIASETSLSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNTSHLRIVREVEAIGGNVQASASTEQMGYSFDALKTYVPEMVELLIDCVTNPVFLDWEVNEQ 678 +T +S L NG+++ASE S P ++ +++ GS YES + G + +E +AF+ T+N + +EVE++G ++ A ++ E Y AL +P+ VELL D V N D ++ ++ Sbjct: 47 ETQVSQLDNGLRVASEQSSQPTCTVGVWIDAGSRYESEKNNGAGYFVEHLAFKGTKNRPGNALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIVQNCSLEDSQIEKE 164
BLAST of CK935563 vs. ExPASy Swiss-Prot
Match: MPPB_RAT (Mitochondrial-processing peptidase subunit beta OS=Rattus norvegicus GN=Pmpcb PE=1 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 3.481e-14 Identity = 40/118 (33.90%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 325 KTNISTLPNGVKIASETSLSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNTSHLRIVREVEAIGGNVQASASTEQMGYSFDALKTYVPEMVELLIDCVTNPVFLDWEVNEQ 678 +T ++ L NG+++ASE S ++ L++ GS YE+ + GT H LE MAF+ T+ S L + E+E +G ++ A S EQ Y A +P VE+L D + N + E+ + Sbjct: 57 ETQVTCLENGLRVASENSGISTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERE 174
BLAST of CK935563 vs. ExPASy Swiss-Prot
Match: MPPB_MOUSE (Mitochondrial-processing peptidase subunit beta OS=Mus musculus GN=Pmpcb PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.481e-14 Identity = 40/118 (33.90%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 325 KTNISTLPNGVKIASETSLSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNTSHLRIVREVEAIGGNVQASASTEQMGYSFDALKTYVPEMVELLIDCVTNPVFLDWEVNEQ 678 +T ++ L NG+++ASE S ++ L++ GS YE+ + GT H LE MAF+ T+ S L + E+E +G ++ A S EQ Y A +P VE+L D + N + E+ + Sbjct: 57 ETQVTCLENGLRVASENSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSRDLPRAVEILADIIQNSTLGEAEIERE 174
BLAST of CK935563 vs. ExPASy Swiss-Prot
Match: MPPB_DICDI (Mitochondrial-processing peptidase subunit beta OS=Dictyostelium discoideum GN=mppB PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.481e-14 Identity = 41/111 (36.94%), Postives = 64/111 (57.66%), Query Frame = 1 Query: 325 KTNISTLPNGVKIASETSLSPVASISLYVGCGSIYESPISFGTTHLLERMAFRST-RNTSHLRIVREVEAIGGNVQASASTEQMGYSFDALKTYVPEMVELLIDCVTNPVF 654 +T I+TL NG+++A+E + VAS+ ++V GS+YE+ + G H LE M F+ T + + I E+E +GG++ A S E Y LK VP V++L D + N F Sbjct: 34 ETKITTLSNGIRVATEQTYGEVASVGVWVDSGSVYETDKNNGVAHFLEHMIFKGTAKRPTPQSIETEIENMGGSLNAFTSREHSAYYMKVLKDNVPNAVDILSDILQNSKF 144
BLAST of CK935563 vs. ExPASy Swiss-Prot
Match: QCR1_MOUSE (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus GN=Uqcrc1 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.546e-14 Identity = 39/118 (33.05%), Postives = 69/118 (58.47%), Query Frame = 1 Query: 325 KTNISTLPNGVKIASETSLSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNTSHLRIVREVEAIGGNVQASASTEQMGYSFDALKTYVPEMVELLIDCVTNPVFLDWEVNEQ 678 +T +S L NG+++ASE S ++ +++ GS YE+ + G + LE +AF+ T+N + +EVE+IG ++ A ++ E Y AL +P++VELL D V N D ++ ++ Sbjct: 47 ETQVSILDNGLRVASEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHLNAYSTREHTAYLIKALSKDLPKVVELLADIVQNSSLEDSQIEKE 164
BLAST of CK935563 vs. ExPASy Swiss-Prot
Match: MPPB_BOVIN (Mitochondrial-processing peptidase subunit beta OS=Bos taurus GN=PMPCB PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.546e-14 Identity = 40/118 (33.90%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 325 KTNISTLPNGVKIASETSLSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNTSHLRIVREVEAIGGNVQASASTEQMGYSFDALKTYVPEMVELLIDCVTNPVFLDWEVNEQ 678 +T ++ L NG+++ASE S ++ L++ GS YE+ + GT H LE MAF+ T+ S L + E+E +G ++ A S EQ Y A +P VE+L D + N + E+ + Sbjct: 58 ETRVTCLENGLRVASEDSGLATCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERE 175
BLAST of CK935563 vs. ExPASy Swiss-Prot
Match: MPPB_ARATH (Probable mitochondrial-processing peptidase subunit beta OS=Arabidopsis thaliana GN=At3g02090 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.546e-14 Identity = 40/119 (33.61%), Postives = 71/119 (59.66%), Query Frame = 1 Query: 325 KTNISTLPNGVKIASETSLSP-VASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNTSHLRIVREVEAIGGNVQASASTEQMGYSFDALKTYVPEMVELLIDCVTNPVFLDWEVNEQ 678 +T ++TLPNG+++A+E++LS A++ +++ GS +ES + GT H LE M F+ T + + E+E IGG++ A S EQ Y L + V + +++L D + N F + +N + Sbjct: 96 ETRVTTLPNGLRVATESNLSAKTATVGVWIDAGSRFESDETNGTAHFLEHMIFKGTDRRTVRALEEEIEDIGGHLNAYTSREQTTYYAKVLDSNVNQALDVLADILQNSKFEEQRINRE 214
BLAST of CK935563 vs. ExPASy Swiss-Prot
Match: QCR1_HUMAN (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Homo sapiens GN=UQCRC1 PE=1 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 1.727e-13 Identity = 38/118 (32.20%), Postives = 69/118 (58.47%), Query Frame = 1 Query: 325 KTNISTLPNGVKIASETSLSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNTSHLRIVREVEAIGGNVQASASTEQMGYSFDALKTYVPEMVELLIDCVTNPVFLDWEVNEQ 678 +T +S L NG+++ASE S P ++ +++ GS +E+ + G + LE +AF+ T+N + +EVE++G ++ A ++ E Y AL +P+ VELL D V N D ++ ++ Sbjct: 47 ETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKNNGAGYFLEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLGDIVQNCSLEDSQIEKE 164
BLAST of CK935563 vs. ExPASy Swiss-Prot
Match: MPPB_PONAB (Mitochondrial-processing peptidase subunit beta OS=Pongo abelii GN=PMPCB PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.727e-13 Identity = 39/118 (33.05%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 325 KTNISTLPNGVKIASETSLSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNTSHLRIVREVEAIGGNVQASASTEQMGYSFDALKTYVPEMVELLIDCVTNPVFLDWEVNEQ 678 +T ++ L +G+++ASE S ++ L++ GS YE+ + GT H LE MAF+ T+ S L + E+E +G ++ A S EQ Y A +P VE+L D + N + E+ + Sbjct: 57 ETRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERE 174
BLAST of CK935563 vs. ExPASy Swiss-Prot
Match: MPPB_HUMAN (Mitochondrial-processing peptidase subunit beta OS=Homo sapiens GN=PMPCB PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.727e-13 Identity = 39/118 (33.05%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 325 KTNISTLPNGVKIASETSLSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNTSHLRIVREVEAIGGNVQASASTEQMGYSFDALKTYVPEMVELLIDCVTNPVFLDWEVNEQ 678 +T ++ L +G+++ASE S ++ L++ GS YE+ + GT H LE MAF+ T+ S L + E+E +G ++ A S EQ Y A +P VE+L D + N + E+ + Sbjct: 57 ETRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERE 174 The following BLAST results are available for this feature:
BLAST of CK935563 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935563 ID=CK935563; Name=CK935563; organism=Citrus sinensis; type=EST; length=682bpback to top |