CK935563

Overview
NameCK935563
Unique NameCK935563
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length682
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9377 contig Csv1_Contig9377:55..736. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935563 vs. ExPASy Swiss-Prot
Match: MPPA_BLAEM (Mitochondrial-processing peptidase subunit alpha OS=Blastocladiella emersonii PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.727e-13
Identity = 36/117 (30.77%), Postives = 67/117 (57.26%), Query Frame = 1
Query:  328 TNISTLPNGVKIASETSLSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNTSHLRIVREVEAIGGNVQASASTEQMGYSFDALKTYVPEMVELLIDCVTNPVFLDWEVNEQ 678
            T ++ LP+G+++A+  S S  A++ +YV  G IYE+ I  G +H +  +AF+ST   +  ++++ +  +GGN+  +A+ E + Y    L   +P  V+LL D    P   + E+ E+
Sbjct:   15 TCMTRLPSGIRVATAPSNSHFAAVGVYVDAGPIYETSIDRGVSHFVSSLAFKSTHGATESQVLKTMAGLGGNLFCTATRESILYQGSVLHHDLPRTVQLLADTTLRPALTEEEIAER 131          
BLAST of CK935563 vs. ExPASy Swiss-Prot
Match: MPPA_YEAST (Mitochondrial-processing peptidase subunit alpha OS=Saccharomyces cerevisiae GN=MAS2 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.462e-12
Identity = 36/115 (31.30%), Postives = 65/115 (56.52%), Query Frame = 1
Query:  334 ISTLPNGVKIASETSLSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNTSHLRIVREVEAIGGNVQASASTEQMGYSFDALKTYVPEMVELLIDCVTNPVFLDWEVNEQ 678
            +S+L NG+K+A+  +    +++ LY+  GS +E     G TH+L+R+AF+ST +     +   +E +GGN Q ++S E + Y        V +M++L+ + V  P   + E+ EQ
Sbjct:   21 LSSLANGLKVATSNTPGHFSALGLYIDAGSRFEGRNLKGCTHILDRLAFKSTEHVEGRAMAETLELLGGNYQCTSSRENLMYQASVFNQDVGKMLQLMSETVRFPKITEQELQEQ 135          
BLAST of CK935563 vs. ExPASy Swiss-Prot
Match: MPPB_YEAST (Mitochondrial-processing peptidase subunit beta OS=Saccharomyces cerevisiae GN=MAS1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11
Identity = 42/112 (37.50%), Postives = 64/112 (57.14%), Query Frame = 1
Query:  319 PGKTNISTLPNGVKIASE-TSLSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNTSHLRIVREVEAIGGNVQASASTEQMGYSFDALKTYVPEMVELLIDCVTNPV 651
            PG T  S LPNG+ IA+E    +  A++ ++V  GS  E+  + GT H LE +AF+ T+N S   I  E+E IG ++ A  S E   Y   +L+  +P+ V++L D +T  V
Sbjct:   24 PG-TRTSKLPNGLTIATEYIPNTSSATVGIFVDAGSRAENVKNNGTAHFLEHLAFKGTQNRSQQGIELEIENIGSHLNAYTSRENTVYYAKSLQEDIPKAVDILSDILTKSV 134          
The following BLAST results are available for this feature:
BLAST of CK935563 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
MPPA_BLAEM1.727e-1330.77Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA_YEAST1.462e-1231.30Mitochondrial-processing peptidase subunit alpha O... [more]
MPPB_YEAST3.602e-1137.50Mitochondrial-processing peptidase subunit beta OS... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004554_C12 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935563 ID=CK935563; Name=CK935563; organism=Citrus sinensis; type=EST; length=682bp
GGGGGAGCCTCTTTCTCTCGATTAGCTGCCAGTCTTCAACACTTGTCCCG
TTCAAATTAGGGTTTTGGAGAATTGACTATCAAATCAATCAACATGTACA
GAAACGCAGCCTCTCGTCTTCGAGCCCTCAAGGGCCATGTGCGTTGTAGG
GTGCCTTCAGCCACAAGATTTGCAAGTTCCAGTGCCGTTGCTTCAACTTC
ATCCTCTTCGGGTGGTCTCTTTAGCTGGTTGACTGGGGAACGGTCCAGTT
CTTCACCTTCTCTGGACTTTCCACTTCCGGGTGTCTCTCTTCCACCTTCA
TTGCCTGATTATGTTGAACCTGGTAAAACCAACATTTCTACTCTACCAAA
TGGTGTCAAAATTGCCTCGGAAACATCATTGAGTCCTGTAGCCTCAATAT
CGTTATATGTTGGTTGTGGTTCAATTTATGAGTCACCAATCTCATTTGGG
ACAACACACTTGCTTGAGCGTATGGCTTTTAGAAGTACAAGAAATACGAG
TCACTTGCGTATTGTGCGAGAAGTGGAGGCAATTGGTGGCAATGTCCAAG
CCTCAGCTTCTACGGAGCAGATGGGTTACTCCTTTGATGCTTTGAAAACT
TATGTTCCTGAAATGGTAGAGCTTCTTATTGACTGTGTGACAAACCCTGT
TTTTCTGGATTGGGAGGTCAACGAACAGCTCA
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