CK935565

Overview
NameCK935565
Unique NameCK935565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: QKI_HORSE (Protein quaking OS=Equus caballus GN=QKI PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.719e-29
Identity = 61/130 (46.92%), Postives = 90/130 (69.23%), Query Frame = 3
Query:  504 GLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREXXLLNGTLRE 893
            G IV+   ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D  +EE  RGKP +EHLNE LH+L+  E      + +L +A E ++ LL P  E  D  KK QL E  +LNGT R+
Sbjct:   77 GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206          
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: QKI_FELCA (Protein quaking OS=Felis catus GN=QKI PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.719e-29
Identity = 61/130 (46.92%), Postives = 90/130 (69.23%), Query Frame = 3
Query:  504 GLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREXXLLNGTLRE 893
            G IV+   ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D  +EE  RGKP +EHLNE LH+L+  E      + +L +A E ++ LL P  E  D  KK QL E  +LNGT R+
Sbjct:   77 GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206          
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: QKI_CANFA (Protein quaking OS=Canis familiaris GN=QKI PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.719e-29
Identity = 61/130 (46.92%), Postives = 90/130 (69.23%), Query Frame = 3
Query:  504 GLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREXXLLNGTLRE 893
            G IV+   ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D  +EE  RGKP +EHLNE LH+L+  E      + +L +A E ++ LL P  E  D  KK QL E  +LNGT R+
Sbjct:   77 GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206          
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: QKI_BOVIN (Protein quaking OS=Bos taurus GN=QKI PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.719e-29
Identity = 61/130 (46.92%), Postives = 90/130 (69.23%), Query Frame = 3
Query:  504 GLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREXXLLNGTLRE 893
            G IV+   ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D  +EE  RGKP +EHLNE LH+L+  E      + +L +A E ++ LL P  E  D  KK QL E  +LNGT R+
Sbjct:   77 GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206          
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: QKIB_XENLA (Protein quaking-B OS=Xenopus laevis GN=qki-B PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.719e-29
Identity = 61/130 (46.92%), Postives = 90/130 (69.23%), Query Frame = 3
Query:  504 GLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREXXLLNGTLRE 893
            G IV+   ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D  +EE  RGKP +EHLNE LH+L+  E      + +L +A E ++ LL P  E  D  KK QL E  +LNGT R+
Sbjct:   78 GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 207          
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: QKI_CHICK (Protein quaking OS=Gallus gallus GN=QKI PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 4.857e-29
Identity = 61/130 (46.92%), Postives = 90/130 (69.23%), Query Frame = 3
Query:  504 GLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREXXLLNGTLRE 893
            G IV+   ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D  +EE  RGKP +EHLNE LH+L+  E      + +L +A E ++ LL P  E  D  KK QL E  +LNGT R+
Sbjct:   77 GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLIPAAEGEDSLKKMQLMELAILNGTYRD 206          
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: QKIB_DANRE (Protein quaking-B OS=Danio rerio GN=qkib PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.082e-28
Identity = 60/130 (46.15%), Postives = 89/130 (68.46%), Query Frame = 3
Query:  504 GLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREXXLLNGTLRE 893
            G I +   ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D  +EE  RGKP +EHLNE LH+L+  E      + +L +A E ++ LL P  E  D  KK QL E  +LNGT R+
Sbjct:   77 GPIAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206          
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: QKIA_DANRE (Protein quaking-A OS=Danio rerio GN=qkia PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 9.160e-28
Identity = 59/130 (45.38%), Postives = 88/130 (67.69%), Query Frame = 3
Query:  504 GLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREXXLLNGTLRE 893
            G IV    ++ +PV++YP++NFVGR+LGPRG + K++EA T C++++RGR S++D  +EE  RGKP +EHLNE LH+L+  E      + ++ +A E ++ LL P  E  D  KK QL E  +LNGT R+
Sbjct:   77 GPIVHLQEKLFVPVKEYPDYNFVGRILGPRGLTAKQLEAETGCKIMVRGRSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQTRAEIKMRRAVEEVKKLLVPAAEGEDNLKKMQLMELAILNGTYRD 206          
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: HOW_DROME (Protein held out wings OS=Drosophila melanogaster GN=how PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.054e-27
Identity = 55/130 (42.31%), Postives = 86/130 (66.15%), Query Frame = 3
Query:  504 GLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREXXLLNGTLRE 893
            G +V    +V +PV ++P+FNFVGR+LGPRG + K++E  T C++++RG+GS++D  +E+  RGKP +EHL++ LH+L+  E        +L QA   ++ LL P  E  D  KK+QL E  ++NGT R+
Sbjct:  132 GSVVTMNEKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLLVPQAEGEDELKKRQLMELAIINGTYRD 261          

HSP 2 Score: 23.8682 bits (50), Expect = 3.054e-27
Identity = 11/29 (37.93%), Postives = 19/29 (65.52%), Query Frame = 2
Query:  356 YLSELLAERHKLNPFLPVLPNTYRLLNQD 442
            YL++LL +R +L  F  V  +  RLL+++
Sbjct:   78 YLAQLLKDRKQLAAFPNVFTHVERLLDEE 106          
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: GLD1_CAEEL (Female germline-specific tumor suppressor gld-1 OS=Caenorhabditis elegans GN=gld-1 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 3.270e-26
Identity = 55/135 (40.74%), Postives = 88/135 (65.19%), Query Frame = 3
Query:  501 SGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREXXLLNGTLREEGSP 905
            +G ++  T ++ +P  +YP++NFVGR+LGPRG + K++E  T C++++RG+GS++D ++E   RGK  +EHL + LH+LV+ E     V  +L  A E ++ LL P  E  D  K++QL E  ++NGT R   SP
Sbjct:  199 AGDMISITEKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHRGKANWEHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLLIPAPEGTDELKRKQLMELAIINGTYRPMKSP 333          

HSP 2 Score: 22.3274 bits (46), Expect = 3.270e-26
Identity = 10/30 (33.33%), Postives = 18/30 (60.00%), Query Frame = 2
Query:  353 KYLSELLAERHKLNPFLPVLPNTYRLLNQD 442
            +YL++L+ E+  L  F  +  N  RLL+ +
Sbjct:  148 EYLADLVKEKKHLTLFPHMFSNVERLLDDE 177          
The following BLAST results are available for this feature:
BLAST of CK935565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
QKI_HORSE3.719e-2946.92Protein quaking OS=Equus caballus GN=QKI PE=2 SV=1[more]
QKI_FELCA3.719e-2946.92Protein quaking OS=Felis catus GN=QKI PE=2 SV=1[more]
QKI_CANFA3.719e-2946.92Protein quaking OS=Canis familiaris GN=QKI PE=2 SV... [more]
QKI_BOVIN3.719e-2946.92Protein quaking OS=Bos taurus GN=QKI PE=2 SV=1[more]
QKIB_XENLA3.719e-2946.92Protein quaking-B OS=Xenopus laevis GN=qki-B PE=1 ... [more]
QKI_CHICK4.857e-2946.92Protein quaking OS=Gallus gallus GN=QKI PE=2 SV=2[more]
QKIB_DANRE1.082e-2846.15Protein quaking-B OS=Danio rerio GN=qkib PE=2 SV=1[more]
QKIA_DANRE9.160e-2845.38Protein quaking-A OS=Danio rerio GN=qkia PE=2 SV=2[more]
HOW_DROME3.054e-2742.31Protein held out wings OS=Drosophila melanogaster ... [more]
GLD1_CAEEL3.270e-2640.74Female germline-specific tumor suppressor gld-1 OS... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004554_B10 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935565 ID=CK935565; Name=CK935565; organism=Citrus sinensis; type=EST; length=929bp
GGGGACGATAGGCAGCCACTAGTTAGATTAGCGAGTGTGTGTCTGGTCGG
GATCATCCCACCAGCTACACAAATCTGCAGACAGCCGAACGCCACCTTCG
TCATCATCAATCATCGCAATCTTCCGTCCGCCGTACGCTTCTCATCGTCG
ATCATACCGCTGAAGCCACCGTCTGGATCTGATAAAGTGACCCGACGGCG
ACGACCGTAGACACTAACAGCAGAAAACTAACTTAACGATGGCGTCATCA
GGTGGAGGGAGGTTCATGGCCTACTCGCTGTCACCTTCTGCTCCTCACTC
TCCTCACCTCCCCTCTCTCCGCTCCGCATCCTCCGCTATCCTCGATCAAG
AAAAATATCTCTCTGAGTTACTAGCTGAGCGTCATAAGCTTAATCCATTC
CTGCCTGTATTACCGAATACTTACCGGCTGTTGAACCAGGATTTCTGGTT
TAATGCAGTCATCATCAGCACAAAACTGGCTTAGCTCACAAGGTAGCTCA
TCGGGTCTTATTGTTAAGAGGACAATCAGAGTGGATATTCCAGTCGAAAA
ATATCCTAATTTCAACTTTGTCGGGCGCCTCCTTGGTCCTCGAGGCAACT
CGCTTAAGCGAGTCGAAGCTAGTACAGAATGCCGTGTTCTGATTAGGGGA
CGCGGCAGTATAAAGGATCCAGCAAGGGAAGAAATGATGAGAGGAAAACC
TGGGTATGAACATTTGAATGAGCCTCTCCATATCCTGGTTGAGGCAGAAT
TGCCAGTTGAGATAGTTGATGCTCGCCTAATGCAAGCACGTGAGATACTT
GAAGATTTGCTCAAGCCTGTGGATGAATCCCATGATTTCTACAAGAAACA
ACAACTGCGAGAGCNNNCACTGCTCAATGGTACACTTCGTGAAGAGGGTT
CTCCAATGTCTGGGTCAGTGTCCCCCTTT
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