CK935565

Overview
NameCK935565
Unique NameCK935565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: BBP_YARLI (Branchpoint-bridging protein OS=Yarrowia lipolytica GN=BBP PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.809e-15
Identity = 52/134 (38.81%), Postives = 77/134 (57.46%), Query Frame = 3
Query:  531 VDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKD-PAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREXXLLNGTLREE----GSPMSGS 917
            V IPV +YP+ NF+G+LLG RG +LK++E  +  ++ IRGRGS+K    R ++    P      + LH L+ +E   +I  AR +Q  + + D    V E  +  K+ QLRE   LNGTLR++    G+P S S
Sbjct:  183 VYIPVNEYPDINFIGQLLGARGKTLKKMEQESGAKICIRGRGSVKQGKGRTDI----PFQSTAEDDLHCLIISEDEEKI--ARAVQLVQQVIDTAASVPEGQNELKRSQLRELAALNGTLRDDENYGGAPQSSS 310          
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: BBP_NEUCR (Branchpoint-bridging protein OS=Neurospora crassa GN=bpb-1 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.161e-14
Identity = 43/129 (33.33%), Postives = 78/129 (60.47%), Query Frame = 3
Query:  528 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLN---EPLHILVEAELPVEIVDARLMQAREILEDLLK---PVDESHDFYKKQQLREXXLLNGTLREE 896
            +V +PV  YP  NF+G L+GPRGN+LK++E  +  ++ IRG+GS+K+       +G+    H +   E LH L+ A+      + ++ +A++++ ++++    + E  +  K+ QLRE   LNGTLR++
Sbjct:  199 KVYVPVNDYPEINFIGLLIGPRGNTLKKMETESGAKIAIRGKGSVKEG------KGRSDAAHSSNQEEDLHCLIMAD-----TEEKVNKAKKLIHNIIETAASIPEGQNELKRNQLRELAALNGTLRDD 316          
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: BBP_DEBHA (Branchpoint-bridging protein OS=Debaryomyces hansenii GN=BBP PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.981e-14
Identity = 48/139 (34.53%), Postives = 78/139 (56.12%), Query Frame = 3
Query:  513 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIK-----------DPAREEMMRGKPGYEHL-NEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREXXLLNGTLRE 893
            VK   ++ IPV+ YP+ NFVG LLGPRGN+L++++  +  R+ IRG+GS+K           D +   +    P      N+ LH+++ ++   +I  A  +  + I + +  PV ++    K+ QLRE  +LNGTLRE
Sbjct:  160 VKTYEKIYIPVKDYPDINFVGLLLGPRGNTLRQLQEDSGARLAIRGKGSVKDGKSTSSNNDDDDSNSSLSFSNPNLNSSGNDDLHVVITSDSQSKIAKAIKLTNQVIEKAISSPVGQND--LKRGQLRELAILNGTLRE 296          
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: BBP_SCHPO (Branchpoint-bridging protein OS=Schizosaccharomyces pombe GN=bpb1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.528e-14
Identity = 45/127 (35.43%), Postives = 77/127 (60.63%), Query Frame = 3
Query:  528 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYE-HLNEPLHILVEAELPVEIVDARLMQAREILEDLLK---PVDESHDFYKKQQLREXXLLNGTLREE 896
            +V +PV+ YP  NF+G L+GPRG++LK +EA +  ++ IRG+GS+K    E   R  P    ++ E LH LV A+      + ++  A ++++++++    V E  +  K+ QLR+   LNGTLR++
Sbjct:  189 KVYVPVKDYPEINFIGLLIGPRGHTLKDMEAKSGAKIAIRGKGSVK----EGKGRSDPSVRGNMEEDLHCLVTAD-----SEDKINHAIKLIDNVIQTAASVPEGQNDLKRNQLRQLATLNGTLRDD 306          
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: GRP33_ARTSA (Glycine-rich protein GRP33 OS=Artemia salina PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.420e-12
Identity = 40/108 (37.04%), Postives = 67/108 (62.04%), Query Frame = 3
Query:  513 VKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMR--GKPGYEHLNEPLHI-LVEAELPVEIVDARLMQAREILEDLLKPVDE 827
            VK   R  +PV+++P +NF+G+LLGP G+++K+++  T  ++ I GRGS++D  +EE +R  G   Y HLNE LHI ++    P E   AR+  A   ++  + P ++
Sbjct:   72 VKLVSRCCLPVDQFPKYNFLGKLLGPGGSTMKQLQDETMTKISILGRGSMRDRNKEEELRNSGDVKYAHLNEQLHIEIISIASPAE-AHARMAYALTEIKKYITPEED 178          
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: BBP_CRYNE (Branchpoint-bridging protein OS=Cryptococcus neoformans GN=BBP PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.854e-12
Identity = 44/125 (35.20%), Postives = 73/125 (58.40%), Query Frame = 3
Query:  528 RVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGY--EHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREXXLLNGTLREE 896
            +V IPV+++P  NF G L+GPRGNSLK++E  +  ++ IRG+GS+K+       +G+ G   +   + LH L+ A+     V   +    +++E      +  +D +K+ QLRE   LNGTLR++
Sbjct:  249 KVYIPVKEFPEINFFGLLVGPRGNSLKKMERESGAKISIRGKGSVKEG------KGRAGNFPQDEEDELHCLITAD-DESKVKTCVALINKVIETAASTPEGEND-HKRNQLRELASLNGTLRDD 365          
BLAST of CK935565 vs. ExPASy Swiss-Prot
Match: BBP_USTMA (Branchpoint-bridging protein OS=Ustilago maydis GN=BBP PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.046e-12
Identity = 40/125 (32.00%), Postives = 70/125 (56.00%), Query Frame = 3
Query:  522 TIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVDESHDFYKKQQLREXXLLNGTLREE 896
            T +V +P++++P   F G L+GPRGN+LK +E  +  ++ IRG+GS+K        +GK   +   E +H +V A+    +    +    +++E      +  +D +K+ QLRE   LNGTLR++
Sbjct:  249 TEKVYLPIKEFPEIKFFGLLVGPRGNTLKTMERQSGAKISIRGKGSVKTG------KGKMDADEDEEEMHCVVTADDEASVKKC-IKLINQVIETAASTPEGEND-HKRNQLRELAALNGTLRDD 365          
The following BLAST results are available for this feature:
BLAST of CK935565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
BBP_YARLI6.809e-1538.81Branchpoint-bridging protein OS=Yarrowia lipolytic... [more]
BBP_NEUCR1.161e-1433.33Branchpoint-bridging protein OS=Neurospora crassa ... [more]
BBP_DEBHA1.981e-1434.53Branchpoint-bridging protein OS=Debaryomyces hanse... [more]
BBP_SCHPO7.528e-1435.43Branchpoint-bridging protein OS=Schizosaccharomyce... [more]
GRP33_ARTSA1.420e-1237.04Glycine-rich protein GRP33 OS=Artemia salina PE=2 ... [more]
BBP_CRYNE1.854e-1235.20Branchpoint-bridging protein OS=Cryptococcus neofo... [more]
BBP_USTMA7.046e-1232.00Branchpoint-bridging protein OS=Ustilago maydis GN... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004554_B10 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935565 ID=CK935565; Name=CK935565; organism=Citrus sinensis; type=EST; length=929bp
GGGGACGATAGGCAGCCACTAGTTAGATTAGCGAGTGTGTGTCTGGTCGG
GATCATCCCACCAGCTACACAAATCTGCAGACAGCCGAACGCCACCTTCG
TCATCATCAATCATCGCAATCTTCCGTCCGCCGTACGCTTCTCATCGTCG
ATCATACCGCTGAAGCCACCGTCTGGATCTGATAAAGTGACCCGACGGCG
ACGACCGTAGACACTAACAGCAGAAAACTAACTTAACGATGGCGTCATCA
GGTGGAGGGAGGTTCATGGCCTACTCGCTGTCACCTTCTGCTCCTCACTC
TCCTCACCTCCCCTCTCTCCGCTCCGCATCCTCCGCTATCCTCGATCAAG
AAAAATATCTCTCTGAGTTACTAGCTGAGCGTCATAAGCTTAATCCATTC
CTGCCTGTATTACCGAATACTTACCGGCTGTTGAACCAGGATTTCTGGTT
TAATGCAGTCATCATCAGCACAAAACTGGCTTAGCTCACAAGGTAGCTCA
TCGGGTCTTATTGTTAAGAGGACAATCAGAGTGGATATTCCAGTCGAAAA
ATATCCTAATTTCAACTTTGTCGGGCGCCTCCTTGGTCCTCGAGGCAACT
CGCTTAAGCGAGTCGAAGCTAGTACAGAATGCCGTGTTCTGATTAGGGGA
CGCGGCAGTATAAAGGATCCAGCAAGGGAAGAAATGATGAGAGGAAAACC
TGGGTATGAACATTTGAATGAGCCTCTCCATATCCTGGTTGAGGCAGAAT
TGCCAGTTGAGATAGTTGATGCTCGCCTAATGCAAGCACGTGAGATACTT
GAAGATTTGCTCAAGCCTGTGGATGAATCCCATGATTTCTACAAGAAACA
ACAACTGCGAGAGCNNNCACTGCTCAATGGTACACTTCGTGAAGAGGGTT
CTCCAATGTCTGGGTCAGTGTCCCCCTTT
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