CK935580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935580 vs. ExPASy Swiss-Prot
Match: RTNLJ_ARATH (Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.437e-18 Identity = 49/185 (26.49%), Postives = 85/185 (45.95%), Query Frame = 3 Query: 195 QKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQXXXXXXXXXXXXXIGSCCNFWTVLYIGFVAAHTLPVLYEKHEDEVDSXXXXXXXXXXXXYKKLDSGFL 749 ++ VH + G AD+++W+N++ +L T +W LFE Y F V +L ++ F W + LFNR ++P + E + + +N L + ++I G KQ +G+ NF T+LY+G V + +P LYE+++D +D Y+K+D L Sbjct: 2 EESVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDERLL 186
BLAST of CK935580 vs. ExPASy Swiss-Prot
Match: RTNLL_ARATH (Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.075e-17 Identity = 46/168 (27.38%), Postives = 80/168 (47.62%), Query Frame = 3 Query: 177 NRLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQXXXXXXXXXXXXXIGSCCNFWTVLYIGFVAAHTLPVLYEKHEDEV 680 ++LF R + +H +LGGG ADV+LWR K +S ++ A W++FE Y T++ L+L + F W + + NR +P F + + + +VN+ L + DI+ + IGS +F T+ + + T+P YE++ED + Sbjct: 6 DKLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYI 173
BLAST of CK935580 vs. ExPASy Swiss-Prot
Match: RTNLK_ARATH (Reticulon-like protein B11 OS=Arabidopsis thaliana GN=RTNLB11 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.037e-17 Identity = 47/160 (29.38%), Postives = 77/160 (48.12%), Query Frame = 3 Query: 204 VHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQXXXXXXXXXXXXXIGSCCNFWTVLYIGFVAAHTLPVLYEKHEDEVD 683 VH LG G AD+LLWRN+ + +L+ +T W LFE Y+ L+ V L+L + F W + + NR VP +P E + +N L + DI+ + +G+ N T++YIG + + + P++YEK++D +D Sbjct: 13 VHQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHID 172
BLAST of CK935580 vs. ExPASy Swiss-Prot
Match: RTNLN_ARATH (Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 8.718e-16 Identity = 50/165 (30.30%), Postives = 83/165 (50.30%), Query Frame = 3 Query: 192 RQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFW--VNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQXXXXXXXXXXXXXIGSCCNFWTVLYIGFVAAHTLPVLYEKHEDEV 680 R++ ++H LGGG+ AD++ W+NKK S ++L T IW LFE + Y F+T +C L+L + W + S L P + + + + +N + L DIS G + +G+ + T+LYI FV T+P+LYE++E+E+ Sbjct: 18 RRRSLYHNLGGGRFADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLIWSYIGSSQLIQSKPPSINDL----RISESNWRFLFNKINWFIIKLYDISSGKDFRLLFLAVVSLWILSVVGNYFSSLTLLYIVFVGLETIPMLYEQYEEEL 178
BLAST of CK935580 vs. ExPASy Swiss-Prot
Match: RTNLO_ARATH (Reticulon-like protein B15 OS=Arabidopsis thaliana GN=RTNLB15 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 6.465e-11 Identity = 45/161 (27.95%), Postives = 75/161 (46.58%), Query Frame = 3 Query: 204 VHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQXXXXXXXXXXXXXIGSCCNFWTVLYIGFVAAHTLPVLYEKHEDEVDS 686 V +LG G AD+ LW++K S L+ AT W L E++ + ++C L+L ML F W +F P + P+ + + + + L +L +I+ G K IGS + T+LYI V + T+PV+Y + ++ +DS Sbjct: 4 VDQILGDGAVADLCLWKDKINSGITLVMATLFWFLLEFMEARLVPLLCSILLLLMLILFLWAKFGEVFFTRRPPTPEELNQPD---SPLKALFSMMEGHLLMLYEIAYGKDNKTFLKTILYVAIIYNIGSYISLLTILYICLVCSMTIPVVYMQFQELIDS 161 The following BLAST results are available for this feature:
BLAST of CK935580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935580 ID=CK935580; Name=CK935580; organism=Citrus sinensis; type=EST; length=823bpback to top |