CK935603

Overview
NameCK935603
Unique NameCK935603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.392e-19
Identity = 73/210 (34.76%), Postives = 105/210 (50.00%), Query Frame = 3
Query:  249 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVG-IQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLG------AEIIGTFVLVYTVFSAT-DAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIYNKDRGW 854
            RA I+EFIAT +F++ +  +V+ + K     ST G +  +A A    + V V     ISGGH+NPAVT G  +  ++SL RA+ Y V Q LGA+    ++          RLA G  +   G+    G+G       E + TF L+Y  ++   D KR     HV  +APL +GF +    LA  P  G G+NPAR  G  ++     GW
Sbjct:   26 RAAISEFIATAIFVFAAEGSVLSLGKMYHDMSTAGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLL----------RLATG-GMRPPGFALASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKR----GHVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALV-----GW 215          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.392e-19
Identity = 71/208 (34.13%), Postives = 104/208 (50.00%), Query Frame = 3
Query:  219 PGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTV--GIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXII 833
            PGEL      +A +AEFI+  +F++    + M   K      T   G+   + A    +FV V   A ISGGH+NPAVT G F+   +SL +A+ Y V Q LG++    ++K   G    G  +  A V A      + +  EI+ TF LVYTV+ +A D K+      + ++AP+ IGF V    LA     G  +NPA S G  ++
Sbjct:   11 PGELSHPDTAKAAVAEFISMLIFVFAGSGSGMAFSKLTDGGGTTPSGLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKIATGGAAVGAFSLSAGVGA-----WNAVVFEIVMTFGLVYTVYATAVDPKK----GDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV 209          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: AQPZ1_AGRT5 (Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.392e-19
Identity = 70/208 (33.65%), Postives = 102/208 (49.04%), Query Frame = 3
Query:  249 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAG----VVKGFMGAGQYGRLAGG-ANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPI-LAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIYNKDRGW 854
            R  I+EF+ TF  ++    +   V  +      +G  G+A+A G  +  + Y   GISGGH NPAV++GL +A K      + Y+V Q LGA+  A     ++ G  GA   G  A G       GY+    L  EII T   +  +  +T  +       VP+  AP+ IG A+ L+HL +IP+T T +NPARS G  +      GW
Sbjct:    3 RKFISEFLGTFWLVFGGCGSA--VFAAAFPELGIGFLGVAFAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGKFPAANLVPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYGEHSPGGYSLLSALLIEIILTAFFLVVILGSTHGR-------VPVGFAPVAIGLALTLIHLISIPVTNTSVNPARSTGQALFVG---GW 198          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.819e-19
Identity = 73/216 (33.80%), Postives = 112/216 (51.85%), Query Frame = 3
Query:  249 RAGIAEFIATFLFLYISVLTVMGVVK------SNTKCSTVG---IQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVK----GFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIYNKDRGW 854
            RA +AEF++TF+F++    +++ + K      ++T  +T G   +  +A AL   +F  V     +SGGH+NPAVT    +  ++S+ RA++Y V Q +GAI    +++    G    G +         VA G ++  GL  EII TF LVY V+S A D KR +    + I+APL IG  V    L   P  G  +NPAR+ G  ++     GW
Sbjct:   24 RATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALA--LFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLATNGLRPVGFH---------VASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS----IGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALV-----GW 219          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.375e-19
Identity = 70/209 (33.49%), Postives = 104/209 (49.76%), Query Frame = 3
Query:  249 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQG------IAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIYNKDRGW 854
            RA I+EFIAT +F++ +  +V+ + K     ST+   G      +A ALG  + V V     +SGGH+NPAVT G  +  ++SL RA+ Y   Q LGA+    +++   G  +    A     +A G   G  +  E + TF  VY  + +  D KR     H+  +APL +GF +    LA  P  G G+NPAR  G  ++     GW
Sbjct:   28 RAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALG--LAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLATGGARPPGFA-----LASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKR----GHLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALV-----GW 220          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.052e-19
Identity = 69/204 (33.82%), Postives = 103/204 (50.49%), Query Frame = 3
Query:  249 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVG-IQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSAT-DAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIYNKDRGW 854
            RA I+EF+AT +F++ +  +++ + K     ST G +  ++ A    + V V     ISGGH+NPA+T G  L  +LSL RALFY + Q LGA+    +++   G  +    A     +A G      +  E   TF L+Y  ++   D KR     HV  +APL +GF +    LA  P  G G+NPAR  G  ++     GW
Sbjct:   27 RAAISEFLATAIFVFAAEGSILSLGKLYQDMSTPGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTTGGMRPPGFA-----LASGVGDWHAVLLEATMTFGLMYAYYATVIDPKR----GHVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALV-----GW 216          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: AQPZ_PHOLL (Aquaporin Z OS=Photorhabdus luminescens subsp. laumondii GN=aqpZ PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.052e-19
Identity = 57/172 (33.14%), Postives = 88/172 (51.16%), Query Frame = 3
Query:  348 VGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLG--------AEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIYN 839
            +G  G++ A G  +  ++Y    ISGGH NPAVT+GL+   +      + Y++ Q +G I  A V+   + +GQ G  A  +   ++G+ +    G        AEI+ T + +  +  ATD +        P  APL IG A+ L++L +IPIT T +NPARS    I  N
Sbjct:   34 IGFVGVSLAFGLTVLTMIYAVGHISGGHFNPAVTIGLWAGGRFRAVEVIPYIISQVIGGILAAAVLY-VIASGQVGFDATTSGFASNGFGEHSPGGFSLQSAIVAEIVLTAIFLIVIIGATDRRAP------PGFAPLAIGLALVLINLISIPITNTSVNPARSTAVAIFQN 198          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.291e-19
Identity = 69/197 (35.03%), Postives = 104/197 (52.79%), Query Frame = 3
Query:  249 RAGIAEFIATFLFLYISVLTVMGV--VKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXI 830
            +A +AEFIAT LF++  V + +    +         G+  IA A    +FV V   A ISGGH+NPAVT GL +   +++   + Y V Q LGA     +++ ++  GQ     G       G ++ +G+  EI+ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPARS G  +
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQ-YVTHGQAIPTHG-----VSGISEIEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAV 205          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: AQP_DROME (Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.291e-19
Identity = 61/196 (31.12%), Postives = 98/196 (50.00%), Query Frame = 3
Query:  246 YRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXII 833
            +R  + E + TF  +++ V        S T  S   +  IA+  G  +  +      +SG HINPAVTLG  +  ++S+ +A FY+++QC+GAI GA V+K  +     G L  G +           +  E + TF+LV+ V + +D  R      +   APL +G A+   HL  I ++G  +NPARS G  ++
Sbjct:   23 WRMLLGELVGTFFLIFVGV-------GSTTSGS---VPQIAFTFGLTVATIAQGLGHLSGCHINPAVTLGFLIVGEISILKAAFYIIVQCVGAIAGAAVIKVALDGVAGGDL--GVSSFDPSLNCAQAVLIEALITFILVFVVKAVSDPGR----QDIKGSAPLAVGLAIAAGHLCAIKLSGASMNPARSFGPAVV 202          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.911e-19
Identity = 66/208 (31.73%), Postives = 103/208 (49.52%), Query Frame = 3
Query:  219 PGELKSWSFYRAGIAEFIATFLFLYISVLTVM--GVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXII 833
            PGE       RA  AEF +  +F++    + M  G +  +   +  G+   + +    +FV V   A +SGGH+NPAVT G F+   ++L RA+ Y + Q LGA+    ++K   G      +   A  +++G T  + +  EI+ TF LVYTV+ +A D K+      + I+APL IG  V    L      G  +NPA S G  ++
Sbjct:   11 PGEASRPDAIRAAFAEFFSMVIFVFAGQGSGMAYGKLTGDGPATPAGLVAASLSHAFALFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKVSTGG-----METAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKK----GDIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVV 209          
The following BLAST results are available for this feature:
BLAST of CK935603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
TIP31_MAIZE1.392e-1934.76Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1[more]
TIP12_ORYSJ1.392e-1934.13Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
AQPZ1_AGRT51.392e-1933.65Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain... [more]
TIP32_ARATH1.819e-1933.80Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
TIP32_MAIZE2.375e-1933.49Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
TIP31_ORYSJ4.052e-1933.82Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
AQPZ_PHOLL4.052e-1933.14Aquaporin Z OS=Photorhabdus luminescens subsp. lau... [more]
TIP23_MAIZE5.291e-1935.03Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
AQP_DROME5.291e-1931.12Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 ... [more]
TIP13_ARATH6.911e-1931.73Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004553_G12 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIF_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935603 ID=CK935603; Name=CK935603; organism=Citrus sinensis; type=EST; length=861bp
GGGGATTCTCATCACAACATCAAACGGCCACAAACAAAAAAGCAAGTGCT
TCTTATTGACTGTTTTGTGTTTTTGAGGGACTAGCAGAAATGGAAGGTAA
AGAAGAGGATGTTAGACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCGA
TTGGGACGGCGGCTCAGACCCAAGATGGGAAGGACTACGTTGAGCCCCCA
CCGGCGCCGCTCTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAG
GGCCGGTATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCG
TACTGACAGTGATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAACCGTC
GGCATTCAAGGGATTGCATGGGCCCTCGGTGGCATGATCTTCGTGCTCGT
TTACTGCACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACAC
TCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTAC
ATGGTGATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTAAAGGG
TTTCATGGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCG
TAGCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGT
ACTTTTGTTCTTGTCTACACAGTTTTCTCTGCCACTGATGCCAAACGGAG
CGCCAGGGACTCTCATGTTCCTATTTTGGCTCCTCTGCCGATTGGGTTCG
CTGTGTTTTTGGTTCACTTGGCTACCATCCCAATTACCGGAACTGGCATC
AACCCAGCGAGGAGTCTTGGAGCTGNCATCATCTACAACAAGGACCGCGG
TTGGGATNNNN
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