CK935603

Overview
NameCK935603
Unique NameCK935603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEAE (Aquaporin Z OS=Pseudomonas aeruginosa GN=aqpZ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.193e-16
Identity = 55/169 (32.54%), Postives = 87/169 (51.48%), Query Frame = 3
Query:  348 VGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVV-------------KGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARS 815
            +G  G+A A G  +  + Y    ISG H+NPAV++GL++  +   ++ L Y+V Q LG +   GV+              GF   G YG  + G      GY+    L +E++ T + +  +  AT +KR+ +       AP+ IG  + L+HL +IP+T T +NPARS
Sbjct:   33 IGYLGVALAFGLSVLTMAYAIGPISGAHLNPAVSVGLWVGGRFPASQLLPYVVAQVLGGLAAGGVLYLIASGKAGFDLAAGFASNG-YGEHSPG------GYSLQAALVSEVVLTGMFLLIILGAT-SKRAPQG-----FAPIAIGLTLTLIHLISIPVTNTSVNPARS 188          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: AQPZ_SHEON (Aquaporin Z OS=Shewanella oneidensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.152e-16
Identity = 51/160 (31.87%), Postives = 84/160 (52.50%), Query Frame = 3
Query:  348 VGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFV--LVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 821
            +G+ G++ A G  +  + +    ISG H+NPAV+ GL+   +   +  L Y++ Q  G I GAGV+   + +GQ G  +  A   ++G+ +    G  +I   +  +V T+F       S  +      AP+ IG  + L+HL +IPI+ T +NPARS G
Sbjct:   34 IGLLGVSLAFGLTVLTMAFAIGHISGCHLNPAVSFGLWAGGRFPTSELLPYIIAQVAGGIAGAGVLY-LIASGQEG-FSLAAGFASNGFGEHSPGGYSMISVMICEIVMTLFFLLVILGSTDERAPKGFAPIAIGLCLTLIHLISIPISNTSVNPARSTG 191          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.220e-15
Identity = 66/210 (31.43%), Postives = 105/210 (50.00%), Query Frame = 3
Query:  234 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQG--------IAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPI-LAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIY 836
            S +  R  ++EFI+TF F    VL  +G V S+ K     + G        IA AL   +   VY +  +SGGH+NPAVT  + +A ++S+  A+FY   Q + ++    V+K  +             +   G +  +G+ A     FVLVYTVF+A+D +R      +P+ + P+ IGF      LA  P +G  +NPA + G+ ++Y
Sbjct:   18 SMNALRCYVSEFISTFFF----VLAAVGSVMSSRKLMAGDVSGPFGVLIPAIANALA--LSSSVYISWNVSGGHVNPAVTFAMAVAGRISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPIYKIAGEMTGFGASVLEGVLA-----FVLVYTVFTASDPRRG-----LPLAVGPIFIGFVAGANVLAAGPFSGGSMNPACAFGSAMVY 211          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: NIP11_ARATH (Aquaporin NIP1-1 OS=Arabidopsis thaliana GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.593e-15
Identity = 66/222 (29.73%), Postives = 104/222 (46.85%), Query Frame = 3
Query:  201 PAPLFEPGELKSWS--FYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGA---EIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIYNKDRG 851
            P PL +   L S S  F +  IAEF+ T+  ++    +V+  ++++   + V + GIA   G  I VL+Y    ISG HINPAVT+      +  L +   Y++ Q +G+   A  ++   G   +   +G  +V       G  L A   E I TF L++ +       R+  +     LA L IG  V L  L   P++   +NP RSLG  ++Y   +G
Sbjct:   37 PRPLKKQDSLLSVSVPFLQKLIAEFLGTYFLVFTGCASVVVNMQND---NVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGL-DHDVCSGKHDVFIGSSPVGSDLQAFTMEFIVTFYLMFIISGVATDNRAIGE-----LAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPALVYGCYKG 249          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: AQP6_MOUSE (Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.593e-15
Identity = 64/199 (32.16%), Postives = 95/199 (47.74%), Query Frame = 3
Query:  249 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLP-IGFAVFLVHLATIPITGTGINPARSLGAXIIYNK 842
            +A  AEF+AT L+++  V +V+         +   +  IA          V  +   SG H NPAVTL   +   +SL RA+ Y+  Q  GA  GA ++ G    G    L  G NVV +  + G  +  E++ T  LV  VF++ D +++       + +P   IG +V L HL  I  TG  +NPARS G  +I  K
Sbjct:   22 KALFAEFLATGLYVFFGVGSVLP-----WPVALPSVLQIAITFNLATATAVQISWKTSGAHANPAVTLAYLVGSHISLPRAMAYIAAQLAGATAGAALLYGVTPGGIRETL--GVNVVHNSTSTGQAVAVELVLTLQLVLCVFASMDGRQT-------LASPAAMIGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGK 206          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: NO26_SOYBN (Nodulin-26 OS=Glycine max PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.549e-15
Identity = 62/211 (29.38%), Postives = 99/211 (46.92%), Query Frame = 3
Query:  228 LKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVK-GFMGAGQY--GRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIYNKDRG 851
            L S  F +  +AE + T+  ++    ++   V +    + +   GIA   G ++ VLVY    ISGGH NPAVT+     R+  L +   Y+V Q LG+I  +G ++  FMG      G +  G N+ A  +        E I TF L++ +       R+  +      A + IG  + L  +   P+TG  +NPARSLG   ++ +  G
Sbjct:   31 LVSVPFLQKLVAEAVGTYFLIFAGCASL---VVNENYYNMITFPGIAIVWGLVLTVLVYTVGHISGGHFNPAVTIAFASTRRFPLIQVPAYVVAQLLGSILASGTLRLLFMGNHDQFSGTVPNGTNLQAFVF--------EFIMTFFLMFVICGVATDNRAVGE-----FAGIAIGSTLLLNVIIGGPVTGASMNPARSLGPAFVHGEYEG 225          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: AQP6_RAT (Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.549e-15
Identity = 62/198 (31.31%), Postives = 93/198 (46.97%), Query Frame = 3
Query:  249 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIYNK 842
            +A  AEF+AT L+++  V +V+         +   +  +A          V  +   SG H NPAVTL   +   +SL RA+ Y+  Q  GA  GA ++ G    G    L  G NVV +  + G  +  E++ T  LV  VF++ D++++             IG +V L HL  I  TG  +NPARS G  +I  K
Sbjct:   22 KALFAEFLATGLYVFFGVGSVLP-----WPVALPSVLQVAITFNLATATAVQISWKTSGAHANPAVTLAYLVGSHISLPRAVAYIAAQLAGATVGAALLYGVTPGGVRETL--GVNVVHNSTSTGQAVAVELVLTLQLVLCVFASMDSRQTLGS------PAAMIGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGK 206          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.636e-15
Identity = 69/210 (32.86%), Postives = 98/210 (46.67%), Query Frame = 3
Query:  213 FEPGELKSWSFYRAGIAEFIATFLFLYISVLTVM-----GVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAG--ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 821
            FE  E+      RA +AE + TFLF++  V   M     G        +T+    IA AL   + V    TAG  +SGGH+NPAVT+GL +   ++  RA+ Y+  Q L A   A V+  F+  G    +    + +  G +   GL  E+I TF L++  ++     R    S V  + PL  G  V    LA    TG  +NPARS G
Sbjct:   12 FEHDEIPDVGCVRAVLAELVLTFLFVFTGVSAAMAAGSDGKPGDAMPMATLAAVAIAHALAAGVLV----TAGFHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLL-ASSAACVLLRFLSGG----MVTPVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDPR----SQVRAIGPLLTGLIVGANSLAGGNFTGASMNPARSFG 208          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 7.907e-15
Identity = 66/206 (32.04%), Postives = 100/206 (48.54%), Query Frame = 3
Query:  249 RAGIAEFIATFLFLYISVLTVMGV----VKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIG---TFVLVYTVFSATDAKRSA----RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXII 833
            RA  AEF +TFLF++I+V + +          +  S++    +A A G  +F  V+  A +SGGH+NPAVT    +   +++  A+FY   Q LG+   A +V  ++ AGQ    A     +A   T   G GA I+    TF++VYTV  A D +       +      L  L +G       LA   +TG  +NPARS G  ++
Sbjct:   18 RAYFAEFFSTFLFVFIAVGSTISARMLTPDETSDASSLMATAVAQAFG--LFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTF-ACLVLHYISAGQ----AVPTTRIAVEMT---GFGAGILEGVLTFMVVYTVHVAGDPRGGGFGGRKGPAATALGALVVGAVTGACVLAAGSLTGASMNPARSFGPAVV 213          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: AQP8_HUMAN (Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.349e-14
Identity = 69/207 (33.33%), Postives = 100/207 (48.31%), Query Frame = 3
Query:  234 SW--SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGA--NVVAHGYTKGDGLGAEIIGTFVLVYTV-FSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIYN 839
            SW   F +  + E + + LF++I  L+V   +++ T     G+   A A G  + +++     ISGGH NPAV+L   L   L+L   L Y V Q LG + GA + K      ++   +G A   V   G   G  L AEII T +L   V   A + K          LAP  IGFAV +  LA  P++G  +NPAR+ G  ++ N
Sbjct:   29 SWYERFVQPCLVELLGSALFIFIGCLSV---IENGTD---TGLLQPALAHGLALGLVIATLGNISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLLGGMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAG-ALVAEIILTTLLALAVCMGAINEKTKGP------LAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVAN 222          
The following BLAST results are available for this feature:
BLAST of CK935603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
AQPZ_PSEAE4.193e-1632.54Aquaporin Z OS=Pseudomonas aeruginosa GN=aqpZ PE=3... [more]
AQPZ_SHEON7.152e-1631.88Aquaporin Z OS=Shewanella oneidensis GN=aqpZ PE=3 ... [more]
TIP51_ARATH1.220e-1531.43Probable aquaporin TIP5-1 OS=Arabidopsis thaliana ... [more]
NIP11_ARATH1.593e-1529.73Aquaporin NIP1-1 OS=Arabidopsis thaliana GN=NIP1-1... [more]
AQP6_MOUSE1.593e-1532.16Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1[more]
NO26_SOYBN3.549e-1529.38Nodulin-26 OS=Glycine max PE=1 SV=2[more]
AQP6_RAT3.549e-1531.31Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1[more]
TIP41_MAIZE4.636e-1532.86Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1[more]
TIP51_ORYSJ7.907e-1532.04Probable aquaporin TIP5-1 OS=Oryza sativa subsp. j... [more]
AQP8_HUMAN1.349e-1433.33Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCGF1004553_G12 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIF_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935603 ID=CK935603; Name=CK935603; organism=Citrus sinensis; type=EST; length=861bp
GGGGATTCTCATCACAACATCAAACGGCCACAAACAAAAAAGCAAGTGCT
TCTTATTGACTGTTTTGTGTTTTTGAGGGACTAGCAGAAATGGAAGGTAA
AGAAGAGGATGTTAGACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCGA
TTGGGACGGCGGCTCAGACCCAAGATGGGAAGGACTACGTTGAGCCCCCA
CCGGCGCCGCTCTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAG
GGCCGGTATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCG
TACTGACAGTGATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAACCGTC
GGCATTCAAGGGATTGCATGGGCCCTCGGTGGCATGATCTTCGTGCTCGT
TTACTGCACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACAC
TCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTAC
ATGGTGATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTAAAGGG
TTTCATGGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCG
TAGCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGT
ACTTTTGTTCTTGTCTACACAGTTTTCTCTGCCACTGATGCCAAACGGAG
CGCCAGGGACTCTCATGTTCCTATTTTGGCTCCTCTGCCGATTGGGTTCG
CTGTGTTTTTGGTTCACTTGGCTACCATCCCAATTACCGGAACTGGCATC
AACCCAGCGAGGAGTCTTGGAGCTGNCATCATCTACAACAAGGACCGCGG
TTGGGATNNNN
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