CK935603
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: NIP31_ARATH (Aquaporin NIP3-1 OS=Arabidopsis thaliana GN=NIP3-1 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 2.544e-13 Identity = 59/205 (28.78%), Postives = 94/205 (45.85%), Query Frame = 3 Query: 228 LKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVK-GFMGAGQYGRLAGGANVVAH-GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIY 836 L S SF + I EF+ TF ++ +V + T V + GIA G ++ V++Y +SG H NPAV++ ++K + Y+ Q LG+ A V++ F L G V + + E I TF L++ + + KR+ A + IG + L L + PI+G +NPARSLG +I+ Sbjct: 36 LVSVSFVQKLIGEFVGTFTMIFAGC---SAIVVNETYGKPVTLPGIALVWGLVVTVMIYSIGHVSGAHFNPAVSIAFASSKKFPFNQVPGYIAAQLLGSTLAAAVLRLVFHLDDDVCSLKGDVYVGTYPSNSNTTSFVMEFIATFNLMFVISAVATDKRATGS-----FAGIAIGATIVLDILFSGPISGASMNPARSLGPALIW 232
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 3.322e-13 Identity = 63/206 (30.58%), Postives = 97/206 (47.09%), Query Frame = 3 Query: 213 FEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAG--ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSA-TDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 821 +EPG L RA E + TFLF++I V + + K+ A A+ + V V TAG +SGGH+NPAVTL L + ++L R+ Y+ Q G+ +++ G A + +A G G+ AE + TF L+ + + D +R+A P+L L +G +A +TG +NPARS G Sbjct: 18 WEPGCL------RAVAGELLFTFLFVFIGVASTITAGKAAGGAGEAAAVTAA-AMAQALVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRCLTGGA-----ATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAAPPGTGPLLTGLLVGANT----VAGGALTGASMNPARSFG 207
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: TIP51_MAIZE (Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.667e-13 Identity = 63/206 (30.58%), Postives = 95/206 (46.12%), Query Frame = 3 Query: 249 RAGIAEFIATFLFLYISVLTVMGVVKSNTK--CSTVG---IQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA------RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXII 833 R+ +AEFI+TFLF++ +V + + T S+ G +A A G +F V A +SGGH+NPAVT + ++ + A+FY Q LGA A + AG+ +A T G E + TF+LVYTV + + + R+ L L +G LA +TG +NPARS G ++ Sbjct: 20 RSYLAEFISTFLFVFTAVGSAISARMLTTPDVTSSAGPLVATAVAQAFG--LFAAVLIAADVSGGHVNPAVTFAYAIGGRIGVPSAMFYWASQLLGATF-ACLSLNLFSAGE----EVPTTRIAVAMTGFGGAVLEGVLTFLLVYTVHVVGEREPRSRGGDGKREFAATALGALAVGLTQGAFVLAAGALTGASMNPARSFGPAVV 218
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: NIP11_MAIZE (Aquaporin NIP1-1 OS=Zea mays GN=NIP1-1 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.667e-13 Identity = 59/202 (29.21%), Postives = 92/202 (45.54%), Query Frame = 3 Query: 243 FYRAGIAEFIATFLFLYISVLTVMGVVKSN-TKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQY----GRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXII 833 F + IAE T+ ++ G V N +K + G+A G + V+VY ISG H NPAVTL + + + Y++ Q LGA +G ++ M G++ G L G+ V L EII TF L++ + R+ + LA L +G + L L P++G +NPARS+G ++ Sbjct: 42 FIQKIIAEIFGTYFLMFAGC----GAVTINASKNGQITFPGVAIVWGLAVMVMVYAVGHISGAHFNPAVTLAFATSGRFPWRQLPAYVLAQMLGATLASGTLR-LMFGGRHEHFPGTLPTGSEV--------QSLVIEIITTFYLMFVISGVATDNRAIGE-----LAGLAVGATILLNVLIAGPVSGASMNPARSVGPALV 225
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: GLPF_SHIFL (Glycerol uptake facilitator protein OS=Shigella flexneri GN=glpF PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 5.667e-13 Identity = 57/207 (27.54%), Postives = 93/207 (44.93%), Query Frame = 3 Query: 258 IAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGF---------------MGAGQYGRLAGGANVVAHGYTK-GDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXI 830 IAEF+ T L ++ V V + + I + W LG + + +Y TAG+SG H+NPAVT+ L+L + + ++V Q GA C A +V G G+ + LAG + + + E++ T +L+ + + TD LAPL IG + ++ + P+TG +NPAR G + Sbjct: 12 IAEFLGTGLLIFFGVGCVAALKVAGASFGQWEIS-VIWGLG--VAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGP---LAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKV 212
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: GLPF_ECOLI (Glycerol uptake facilitator protein OS=Escherichia coli (strain K12) GN=glpF PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.667e-13 Identity = 57/207 (27.54%), Postives = 93/207 (44.93%), Query Frame = 3 Query: 258 IAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGF---------------MGAGQYGRLAGGANVVAHGYTK-GDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXI 830 IAEF+ T L ++ V V + + I + W LG + + +Y TAG+SG H+NPAVT+ L+L + + ++V Q GA C A +V G G+ + LAG + + + E++ T +L+ + + TD LAPL IG + ++ + P+TG +NPAR G + Sbjct: 12 IAEFLGTGLLIFFGVGCVAALKVAGASFGQWEIS-VIWGLG--VAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGP---LAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKV 212
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: GLPF_ECOL6 (Glycerol uptake facilitator protein OS=Escherichia coli O6 GN=glpF PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.667e-13 Identity = 57/207 (27.54%), Postives = 93/207 (44.93%), Query Frame = 3 Query: 258 IAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGF---------------MGAGQYGRLAGGANVVAHGYTK-GDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXI 830 IAEF+ T L ++ V V + + I + W LG + + +Y TAG+SG H+NPAVT+ L+L + + ++V Q GA C A +V G G+ + LAG + + + E++ T +L+ + + TD LAPL IG + ++ + P+TG +NPAR G + Sbjct: 12 IAEFLGTGLLIFFGVGCVAALKVAGASFGQWEIS-VIWGLG--VAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGP---LAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKV 212
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: GLPF_ECO57 (Glycerol uptake facilitator protein OS=Escherichia coli O157:H7 GN=glpF PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.667e-13 Identity = 57/207 (27.54%), Postives = 93/207 (44.93%), Query Frame = 3 Query: 258 IAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGF---------------MGAGQYGRLAGGANVVAHGYTK-GDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXI 830 IAEF+ T L ++ V V + + I + W LG + + +Y TAG+SG H+NPAVT+ L+L + + ++V Q GA C A +V G G+ + LAG + + + E++ T +L+ + + TD LAPL IG + ++ + P+TG +NPAR G + Sbjct: 12 IAEFLGTGLLIFFGVGCVAALKVAGASFGQWEIS-VIWGLG--VAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGP---LAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKV 212
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.401e-13 Identity = 62/198 (31.31%), Postives = 91/198 (45.96%), Query Frame = 3 Query: 249 RAGIAEFIATFLFLYISVLTVM-----GVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAG--ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 821 RA +AE + TFLF++ V M G +T+ IA AL + V TAG +SGGH+NPAVT+G+ + ++ RAL Y+ Q L + +++ G + + + G GL E+I TF L++ ++ R S V + PL G V LA TG +NPARS G Sbjct: 26 RAVLAELVLTFLFVFTGVSASMAAGAGGKPGEAMPMATLAAVAIAHALAAGVLV----TAGFHVSGGHLNPAVTVGILVRGHITKLRALLYVAAQLLASSLACILLRYLSGG-----MVTPVHALGAGIRPMQGLVMEVILTFSLLFVTYAMILDPR----SQVRTIGPLLTGLIVGANSLAGGNFTGASMNPARSFG 210
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: TIP41_ORYSJ (Probable aquaporin TIP4-1 OS=Oryza sativa subsp. japonica GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.401e-13 Identity = 61/203 (30.05%), Postives = 93/203 (45.81%), Query Frame = 3 Query: 222 GELKSWSFYRAGIAEFIATFLFLYISVLTVM--GVVK-SNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 821 GE+ RA +AE + TF+F++ V M GV + + + G+A A VLV +SGGH+NPAVT+ L ++ R+ Y+ Q L + +++ G +A + + G GL EII TF L++ V++ RS+ VP PL G V +A +G +NPARS G Sbjct: 11 GEVVDAGCVRAVLAELVLTFVFVFTGVAATMAAGVPEVAGAAMPMAALAGVAIATALAAGVLVTAGFHVSGGHLNPAVTVALLARGHITAFRSALYVAAQLLASSLACILLRYLTGG-----MATPVHTLGSGIGPMQGLVMEIILTFSLLFVVYATILDPRSS----VPGFGPLLTGLIVGANTIAGGNFSGASMNPARSFG 204 The following BLAST results are available for this feature:
BLAST of CK935603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 189
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935603 ID=CK935603; Name=CK935603; organism=Citrus sinensis; type=EST; length=861bpback to top |