CK935603
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: NIP31_ORYSJ (Aquaporin NIP3-1 OS=Oryza sativa subsp. japonica GN=NIP3-1 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 6.265e-12 Identity = 56/191 (29.32%), Postives = 86/191 (45.03%), Query Frame = 3 Query: 261 AEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXI 830 AEF+ TF+ ++ + + K S G A G + ++ T ISG H+NP++T+ R + Y+ +Q LG+IC +KG + L+GG V + E I TF L++ V + ATD + V LA + +G AV L L P TG +NP R+LG + Sbjct: 87 AEFVGTFILIFFATAAPIVNQKYGGAISPFGNAACA---GLAVTTIILSTGHISGAHLNPSLTIAFAALRHFPWLQVPAYVAVQVLGSICAGFALKGVF----HPFLSGGVTVPDPTISTAQAFFTEFIITFNLLFVVTAVATDTRA------VGELAGIAVGAAVTLNILIAGPTTGGSMNPVRTLGPAV 264
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: GLPF_PSEAE (Glycerol uptake facilitator protein OS=Pseudomonas aeruginosa GN=glpF PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.069e-11 Identity = 56/214 (26.17%), Postives = 92/214 (42.99%), Query Frame = 3 Query: 240 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGF---------------MGAGQYGRLAGGANVVAH-GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXII 833 S + +AEF+ T L ++ V + + I I W +G + + +Y +AG+SG H+NPAV++ L+L + FY+ Q GA C A +V G+ LA + H + G E++ T +L+ + + TD LAPL IG + ++ A P+TG +NPAR G ++ Sbjct: 9 SLFGQCLAEFLGTALLIFFGTGCVAALKVAGASFGLWEIS-IIWGVG--VSMAIYLSAGVSGAHLNPAVSIALWLFAGFEGRKLPFYITAQVAGAFCAAALVYTLYSSLFIEFEQAQNIVRGSQDSLALASVFSTYPHPALSVGQAFLVEVVITAILMAVIMALTDDGNGLPRGP---LAPLLIGLLIAVIGSAMGPLTGFAMNPARDFGPKLM 216
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: AQPM_ARCFU (Probable aquaporin aqpM OS=Archaeoglobus fulgidus GN=aqpM PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.823e-11 Identity = 64/203 (31.53%), Postives = 92/203 (45.32%), Query Frame = 3 Query: 261 AEFIATFLFLYI----SVLTVM---GVVKSNTKCSTVGIQGIA--WALGGMIFVL-----VYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMG--AGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 821 AE + TF+ ++ +V+T+M G K N +G G W GM F L +Y ISG HINPAVT+ L+ + + Y+V Q +GA G+ + +G A G L A GY G + E IGTF+L+ + +R+ P A L IG V + ITG+ +NPAR+ G Sbjct: 11 AEVVGTFILVFFGPGAAVITLMIANGADKPNEFNIGIGALGGLGDWFAIGMAFALAIAAVIYSLGRISGAHINPAVTIALWSIGRFPGREVVPYIVAQFIGAALGSLLFLACVGPAAATVGGLGATAPFPGIGY--GQAILTEAIGTFLLMLVIMGVAVDERAP-----PGFAGLVIGLTVGGIITTIGNITGSSLNPARTFG 206
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: GLPF_STRR6 (Glycerol uptake facilitator protein OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=glpF PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.381e-11 Identity = 57/198 (28.79%), Postives = 90/198 (45.45%), Query Frame = 3 Query: 264 EFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYT------KGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIYN 839 EF+ T + + + V GVV TK ++ G I G + V V+ + +S H+NPAVT+G+ L L L Y++ Q GA+ G ++ Y N++A T L +EI+GTFVLV T+F+ A + +G + + L+ TG +NPAR LG I+++ Sbjct: 8 EFLGTLILILLGNGVVAGVVLPKTKSNSSGWIVITMGWGIAVAVAVFVSGKLSPAHLNPAVTIGVALKGGLPWASVLPYILAQFAGAMLGQ-ILVWLQFKPHYEAEENAGNILATFSTGPAIKDTVSNLISEILGTFVLVLTIFALGLYDFQAG------IGTFAVGTLIVGIGLSLGGTTGYALNPARDLGPRIMHS 198
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: YFF4_YEAST (Uncharacterized membrane protein YFL054C OS=Saccharomyces cerevisiae GN=YFL054C PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.109e-11 Identity = 69/214 (32.24%), Postives = 89/214 (41.59%), Query Frame = 3 Query: 249 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQG------IAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKG--------FMGAGQYGRLAGGANVVAHG---YTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPI---LAPLPIGFAVFLVHLATIPITGTGINPARSLGAXI 830 R AEF+ T VL + GV + T G G AW G M+ V Y GISGGHINPAVT+ + + RK + Y+V Q +GA G + G F G A GA + T + E IG +LV + + D DS+ P + L IGF V + +A T INPAR LG I Sbjct: 348 REPFAEFLGTL------VLVIFGVGGNLQATVTKGSGGSYESLSFAWGFGCMLGV--YVAGGISGGHINPAVTISMAIFRKFPWKKVPVYIVAQIIGAYFGGAMAYGYFWSSITEFEGGPHIRTTATGACLFTDPKSYVTWRNAFFDEFIGASILVGCLMALLD------DSNAPPGNGMTALIIGFLVAAIGMALGYQTSFTINPARDLGPRI 547
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: NIP51_ARATH (Probable aquaporin NIP5-1 OS=Arabidopsis thaliana GN=NIP5-1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.109e-11 Identity = 51/191 (26.70%), Postives = 87/191 (45.55%), Query Frame = 3 Query: 261 AEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXI 830 AEF+ TF+ ++ + G + + + G A G + +++ T ISG H+NP++T+ R Y+ Q +IC + +KG + ++GG + + + G E I TF+L++ V + ATD + V LA + +G V L L P TG +NP R+LG + Sbjct: 82 AEFVGTFILIFTATA---GPIVNQKYDGAETLIGNAACAGLAVMIIILSTGHISGAHLNPSLTIAFAALRHFPWAHVPAYIAAQVSASICASFALKGVF----HPFMSGGVTIPS--VSLGQAFALEFIITFILLFVVTAVATDTRA------VGELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAV 257
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: NIP31_MAIZE (Aquaporin NIP3-1 OS=Zea mays GN=NIP3-1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.109e-11 Identity = 54/191 (28.27%), Postives = 86/191 (45.03%), Query Frame = 3 Query: 261 AEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXI 830 AEF+ TF+ ++ + + K S G A G + ++ T ISG H+NP++T+ R + Y+ +Q L ++C A +KG + L+GG V + E I +F L++ V + ATD + V LA + +G AV L L P TG +NP R+LG + Sbjct: 78 AEFVGTFILIFFATAAPIVNQKYGGAISPFGNAACA---GLAVATVILSTGHISGAHLNPSLTIAFAALRHFPWLQVPAYVAVQALASVCAAFALKGVF----HPFLSGGVTVPDATVSTAQAFFTEFIISFNLLFVVTAVATDTRA------VGELAGIAVGAAVTLNILVAGPTTGGSMNPVRTLGPAV 255
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: NIP33_ORYSJ (Aquaporin NIP3-3 OS=Oryza sativa subsp. japonica GN=NIP3-3 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.047e-11 Identity = 58/191 (30.37%), Postives = 90/191 (47.12%), Query Frame = 3 Query: 261 AEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXI 830 AEF TF+ ++ + T+ + S + GIA + G + VLV ISG H+NPA+++ + + L L Y+ Q LGA+ + VKG Y + G V + T + E I TF L++ + + ATD + V L + +G V + L P TG +NPAR++GA I Sbjct: 72 AEFFGTFILIFTVLSTI---IMDEQHKSIETLLGIATSAGLAVTVLVLSLIHISGCHLNPAISIAMAVFGHLPSAHLLPYISSQILGAVAASFAVKGL-----YHPVNPGIVTVPNVGTV-EAFFVEFIITFFLLFIITALATD------PNAVKELIAVAVGATVMMNILVAGPSTGASMNPARTIGAAI 247
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: NIP12_ORYSJ (Aquaporin NIP1-2 OS=Oryza sativa subsp. japonica GN=NIP1-2 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 9.047e-11 Identity = 56/201 (27.86%), Postives = 89/201 (44.28%), Query Frame = 3 Query: 258 IAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANV---VAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIYNKDRG 851 +AE + T+ ++ V VV +T V GI G ++ VLVY + ISG H NPAVT+ + + Y+V Q LG+ + ++ G G G A G ++ + E + +F L++ V R+ + LA L +G V + L P+TG +NPARSLG ++ + G Sbjct: 67 LAEILGTYFMIFAGCGAV--VVNQSTG-GAVTFPGICAVWGLVVMVLVYTVSHISGAHFNPAVTVAFATCGRFRWKQVPSYVVAQVLGSTMASLTLRVVFGGGGGG--ARGEHLFFGTTPAGSMAQAAALEFVISFFLMFVVSGVATDNRAIGE-----LAGLAVGATVAVNVLFAGPVTGASMNPARSLGPAMVAGRYGG 257 The following BLAST results are available for this feature:
BLAST of CK935603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 189
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935603 ID=CK935603; Name=CK935603; organism=Citrus sinensis; type=EST; length=861bpback to top |