CK935603

Overview
NameCK935603
Unique NameCK935603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:1..858. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 340.117 bits (871), Expect = 9.444e-93
Identity = 172/243 (70.78%), Postives = 189/243 (77.78%), Query Frame = 3
Query:  153 GTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKS--------NTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIYNKDRGWD 857
            G  A     KDY +PPPAPL +  EL  WS YRA IAEFIAT LFLYI+V TV+G            +  C  VGI GIAWA GGMIF+LVYCTAGISGGHINPAVT GLFLARK+SL RAL Y++ QCLGAICG G+VKGF  A  Y R  GGAN ++ GY+KG GL AEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGA +IYNKD+ WD
Sbjct:    9 GPEAGEFSAKDYTDPPPAPLIDAEELTQWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSA-YYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWD 250          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 340.117 bits (871), Expect = 9.444e-93
Identity = 168/234 (71.79%), Postives = 190/234 (81.20%), Query Frame = 3
Query:  180 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMG--------VVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIYNKDRGWD 857
            KDY +PPPAPL +  EL  WS YRA IAEFIAT LFLYI+V TV+G        V  ++  CS VGI GIAWA GGMIF+LVYCTAGISGGHINPAVT GLFLARK+SL RA+ Y++ QCLGAICG G+VKGF  +  Y R  GGAN ++ GY+KG GLGAEIIGTFVLVYTVFSATD KR+ARDSH+P+LAPLPIGFAVF+VHLATIPITGTGINPARSLG  +IYNKD+ WD
Sbjct:   18 KDYTDPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSS-YYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGTAVIYNKDKAWD 250          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.611e-92
Identity = 165/233 (70.82%), Postives = 185/233 (79.40%), Query Frame = 3
Query:  180 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGV-------VKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIYNKDRGWD 857
            KDY +PPPAPL +P EL  WS YRA IAEFIAT LFLYI+VLT++G        +  NT+C  VGI GIAWA GGMIF+LVYCTAGISGGHINPAVT GLFL RK+SL RAL YM+ QC GAICGAG+ KGF  +  Y R  GG N V+ GY KG  LGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARS G  +I+N D+ WD
Sbjct:   17 KDYHDPPPAPLIDPDELTKWSLYRAAIAEFIATLLFLYITVLTIIGYKRQSDTKIPGNTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYMIAQCAGAICGAGLAKGFQKSF-YNRYGGGVNTVSDGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGPAVIFNNDKAWD 248          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 2.104e-92
Identity = 169/241 (70.12%), Postives = 190/241 (78.84%), Query Frame = 3
Query:  159 AAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKS--------NTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIYNKDRGWD 857
            AA   +GKDY +PPPAPL +  EL  WS YRA IAEF+AT LFLYI+V TV+G            +  C  VG+ GIAWA GGMIF+LVYCTAG+SGGHINPAVT GLFLARK+SL RAL Y+V QCLGAICG G+VKGF  A  Y R  GGAN ++ GY+KG GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGA +IYN D+ WD
Sbjct:    7 AAAAHEGKDYSDPPPAPLVDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQSAF-YVRYGGGANELSAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNNDKAWD 246          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 338.961 bits (868), Expect = 2.104e-92
Identity = 169/234 (72.22%), Postives = 189/234 (80.77%), Query Frame = 3
Query:  180 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--------SNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIYNKDRGWD 857
            KDY +PPPAPL +  EL SWS YRA IAEFIAT LFLYI+V TV+G           ++  C  VG+ GIAWA GGMIFVLVYCTAGISGGHINPAVT GLFLARK+SL RAL Y+V QCLGAICG G+VK F  A  + R  GGAN +A GY++G GLGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGA +IYNKD+ WD
Sbjct:   19 KDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKAFQSA-YFDRYGGGANSLASGYSRGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNKDKPWD 251          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 337.806 bits (865), Expect = 4.687e-92
Identity = 166/236 (70.34%), Postives = 189/236 (80.08%), Query Frame = 3
Query:  180 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGV----------VKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIYNKDRGWD 857
            KDY +PPPAPL +  EL SWS YRA IAEFIAT LFLY++V TV+G             ++  C  VG+ GIAWA GGMIFVLVYCTAGISGGHINPAVT GLFLARK+SL RAL YMV QCLGA+CG G+VK F  A  + R  GGAN +A GY++G GLGAEI+GTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGA ++YNKD+ WD
Sbjct:   19 KDYTDPPPAPLVDAAELGSWSLYRAVIAEFIATLLFLYVTVATVIGYKHQTDASASGAGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMVAQCLGAVCGVGLVKAFQSA-YFDRYGGGANSLASGYSRGAGLGAEIVGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNKDKPWD 253          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 3.038e-91
Identity = 168/232 (72.41%), Postives = 188/232 (81.03%), Query Frame = 3
Query:  180 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGV-VKSNTK-----CSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIYNKDRGWD 857
            +DY +PPPAP  +  ELK WSFYRA IAEF+AT LFLYI+VLTV+G  ++S+T      C  VGI GIAWA GGMIF+LVYCTAGISGGHINPAVT GLFLARK+SL RAL Y++ QCLGAICG G VK F  +  Y R  GGAN +A GY+ G GL AEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GA +IYNK + WD
Sbjct:   16 RDYQDPPPAPFIDGAELKKWSFYRAVIAEFVATLLFLYITVLTVIGYKIQSDTDAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLPRALLYIIAQCLGAICGVGFVKAFQSS-YYTRYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWD 246          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 333.183 bits (853), Expect = 1.154e-90
Identity = 166/228 (72.81%), Postives = 187/228 (82.02%), Query Frame = 3
Query:  180 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMG--VVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIYNKDRGWD 857
            KDY +PPPAPLF+ GEL+ WSFYRA IAEFIAT LFLYI+V TV+G  V  S  +C  VG  GIAWA GGMIF+LVYCTAGISGGHINPAVT GL LARK+S+ RA+ Y+V QCLG I G G+VKG M   QY    GGAN+VA GY+ G  LGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS+GA +IYN+ + WD
Sbjct:   15 KDYTDPPPAPLFDVGELRLWSFYRALIAEFIATLLFLYITVATVIGYKVQSSADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIM-KHQYNANGGGANMVASGYSTGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIYNQKKAWD 241          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 1.154e-90
Identity = 167/234 (71.37%), Postives = 190/234 (81.20%), Query Frame = 3
Query:  177 GKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNT-------KCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIYNKDRGWD 857
            GKDY +PPP PLF+  EL  WSFYRA IAEFIAT LFLY++++TV+G  KS T       +C+ VG+ GIAWA GGMIF+LVYCTAGISGGHINPAVT GL LARK++L RA+ YMV QCLGAICG  +VK F  A  + R  GGAN ++ GY+ G G+ AEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGA IIYNKD+ WD
Sbjct:   14 GKDYQDPPPEPLFDATELGKWSFYRALIAEFIATLLFLYVTIMTVIGY-KSQTDPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQSA-YFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYNKDKAWD 245          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 333.183 bits (853), Expect = 1.154e-90
Identity = 167/232 (71.98%), Postives = 186/232 (80.17%), Query Frame = 3
Query:  180 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGV-VKSNTK-----CSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIYNKDRGWD 857
            +DY +PPP P F+  EL  WS YRA IAEF+AT LFLYI+VLTV+G  ++S+TK     C  VGI GIAWA GGMIF+LVYCTAGISGGHINPAVT GLFLARK+SL RA+ YMV QCLGAICG G VK F  +  Y R  GGAN +A GY  G GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GA +IYNK + WD
Sbjct:   14 RDYEDPPPTPFFDADELTKWSLYRAVIAEFVATLLFLYITVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSS-YYDRYGGGANSLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWD 244          
The following BLAST results are available for this feature:
BLAST of CK935603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
PIP24_MAIZE9.444e-9370.78Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP22_ORYSJ9.444e-9371.79Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP27_MAIZE1.611e-9270.82Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP25_MAIZE2.104e-9270.12Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP21_MAIZE2.104e-9272.22Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP22_MAIZE4.687e-9270.34Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP21_ARATH3.038e-9172.41Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP26_ORYSJ1.154e-9072.81Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP25_ARATH1.154e-9071.37Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP22_ARATH1.154e-9071.98Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004553_G12 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIF_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935603 ID=CK935603; Name=CK935603; organism=Citrus sinensis; type=EST; length=861bp
GGGGATTCTCATCACAACATCAAACGGCCACAAACAAAAAAGCAAGTGCT
TCTTATTGACTGTTTTGTGTTTTTGAGGGACTAGCAGAAATGGAAGGTAA
AGAAGAGGATGTTAGACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCGA
TTGGGACGGCGGCTCAGACCCAAGATGGGAAGGACTACGTTGAGCCCCCA
CCGGCGCCGCTCTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAG
GGCCGGTATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCG
TACTGACAGTGATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAACCGTC
GGCATTCAAGGGATTGCATGGGCCCTCGGTGGCATGATCTTCGTGCTCGT
TTACTGCACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACAC
TCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTAC
ATGGTGATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTAAAGGG
TTTCATGGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCG
TAGCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGT
ACTTTTGTTCTTGTCTACACAGTTTTCTCTGCCACTGATGCCAAACGGAG
CGCCAGGGACTCTCATGTTCCTATTTTGGCTCCTCTGCCGATTGGGTTCG
CTGTGTTTTTGGTTCACTTGGCTACCATCCCAATTACCGGAACTGGCATC
AACCCAGCGAGGAGTCTTGGAGCTGNCATCATCTACAACAAGGACCGCGG
TTGGGATNNNN
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