CK935603

Overview
NameCK935603
Unique NameCK935603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:1..858. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.645e-20
Identity = 68/202 (33.66%), Postives = 109/202 (53.96%), Query Frame = 3
Query:  249 RAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLG----AEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXII 833
            +AG+AEFI+TF+F++    + +   K  ++   +  G+   + A    +FV V   A ISGGH+NPAVT G F+   ++L R + Y++ Q LG+I  + ++               ++V A G ++G G+G     EI+ TF LVYTV+ +A D K+     ++ I+AP+ IGF V    L     TG  +NPA S G  ++
Sbjct:   21 KAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLV----------FVTASSVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV 208          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.645e-20
Identity = 68/203 (33.50%), Postives = 98/203 (48.28%), Query Frame = 3
Query:  225 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXII 833
            EL+S SF+RA  AEF AT  +++  +   +           + +  +A A G  +  LV     ISG H+NPAVT    +  ++SL RA  Y+  Q LGA+ GA V+         G LA   N +  G + G     EI  T   V  +F+  D +R+ R   V     L +GF++ L HL  +  TG G+NPARS    I+
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRWAPG-----PLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL 194          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: AQY1_YEAST (Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.148e-20
Identity = 68/203 (33.50%), Postives = 99/203 (48.77%), Query Frame = 3
Query:  252 AGIAEFIATFLFLYISVLTV------MGVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGG----ANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXI 830
            A + EF  TF+FL+ + +        + +V +        +  IA   G  +   ++C AG+SGG +NPAV+L L LAR +S TR +   V Q         +V G    G    +  G    AN +  G ++  GL  E+ GT +L  TV      KR         +A LPIG ++F+ H+A    TGTG+NPARSLGA +
Sbjct:   51 AAVGEFCGTFMFLWCAYVICNVANHDVALVAAPDGSHPGQLIMIAIGFGFSVMFSIWCFAGVSGGALNPAVSLSLCLARAVSPTRCVVMWVSQ---------IVAGMAAGGAASAMTPGEVLFANSLGLGCSRTRGLFLEMFGTAILCLTVLMTAVEKRETN-----FMAALPIGISLFIAHVALTAYTGTGVNPARSLGAAV 239          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.806e-20
Identity = 71/208 (34.13%), Postives = 105/208 (50.48%), Query Frame = 3
Query:  219 PGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXII 833
            PGEL      +A +AEFI+T +F++    + M   K       +  G+   + A    +FV V   A ISGGH+NPAVT G F+   +SL +AL Y V Q LG++    ++K   G    G  +  A V A      + +  E++ TF LVYTV+ +A D K+      + ++AP+ IGF V    LA     G  +NPA S G  ++
Sbjct:   11 PGELSHPDTAKAAVAEFISTLIFVFAGSGSGMAFSKLTDGGAATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKIATGGAALGAFSLSAGVGAM-----NAVVLEMVMTFGLVYTVYATAVDPKK----GDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV 209          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.806e-20
Identity = 65/198 (32.83%), Postives = 101/198 (51.01%), Query Frame = 3
Query:  246 YRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIYN 839
            +R  +AE I TF  + I V +  G  + +       I  IA+  G  +  L      ISG HINPAVT+G  +  ++S+ +++ Y+ +QC+GAI GA V+K  +     G L  G +  +   T G  +  E + TF+LV  V   +D  R    + +   APL +G ++   HL  I +TG  +NPARS G  ++ N
Sbjct:   23 WRQLMAELIGTFFLVVIGVGSCTGGSEWSPS-----IPQIAFTFGLTVATLAQAIGHISGCHINPAVTVGFLIVGEMSIIKSVLYIAVQCVGAIAGAAVIKVGVSEAVSG-LDLGVSSFSSTLTVGQAVLIEALITFILVVVVKGVSDPGR----TDIKGSAPLAVGLSIAAGHLCAIKLTGASMNPARSFGPAVVQN 210          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUSU (Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.786e-20
Identity = 61/167 (36.53%), Postives = 87/167 (52.10%), Query Frame = 3
Query:  348 VGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGG------ANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXI 830
            +G  G+A A G  +  + Y   GISGGH NPAV+L L +A +L     + Y V Q LGAI  A ++   + +G+ G  AGG        +   GY+   GL  EII T   +  +  +T +   A        AP+ IGF + L+HL +IP+T T +NPARS G  +
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLSLTVAGRLPAKDLIPYWVAQVLGAIATAAILY-VIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVAL 193          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.251e-20
Identity = 67/203 (33.00%), Postives = 98/203 (48.28%), Query Frame = 3
Query:  225 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXII 833
            EL+S SF+RA  AEF AT  +++  + + +           + +  +A A G  +  LV     ISG H+NPAVT    +  ++SL RA  YM  Q LGA+ GA V+         G LA   N +    + G     EI  T   V  +F+  D +R+ +   V     L +GF++ L HL  +  TG G+NPARS    I+
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFGLGSSLRWAPG-----PLHVLQVAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSV----ALAVGFSLALGHLFGMYYTGAGMNPARSFAPAIL 194          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.164e-20
Identity = 68/203 (33.50%), Postives = 97/203 (47.78%), Query Frame = 3
Query:  225 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXII 833
            EL+S SF+RA  AEF AT  +++  +   +           + +  +A A G  +  LV     ISG H+NPAVT    +  ++SL RA  YM  Q LGA+ GA V+         G LA   N +  G +       EI  T   V  +F+  D +R+ R   V     L +GF++ L HL  +  TG G+NPARS    I+
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRWAPG-----PLHVLQVALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL 194          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: AQY2_YEAST (Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.164e-20
Identity = 67/201 (33.33%), Postives = 98/201 (48.76%), Query Frame = 3
Query:  252 AGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQG--------IAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXI 830
            A + EF  TF+FL+ +   V+  V ++    T   +G        IA   G  +   ++C AG+SGG +NPAV+L L LAR +S  R +     Q +  +   G           G++    N +  G ++  GL  E+ GT VL  TV      KR         +A LPIG ++F+ H+A    TGTG+NPARSLGA +
Sbjct:   50 AAVGEFCGTFMFLWCAY--VICNVANHDVALTTEPEGSHPGQLIMIALGFGFSVMFSIWCFAGVSGGALNPAVSLSLCLARAISPARCVVMWFPQIIAGMAAGGAASAMTP----GKVLF-TNALGLGCSRSRGLFLEMFGTAVLCLTVLMTAVEKRETN-----FMAALPIGISLFMAHMALTGYTGTGVNPARSLGAAV 238          
BLAST of CK935603 vs. ExPASy Swiss-Prot
Match: AQPZ2_RHIME (Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.066e-19
Identity = 59/180 (32.78%), Postives = 89/180 (49.44%), Query Frame = 3
Query:  348 VGIQGIAWALGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVV-----------KGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAXIIYNKDRGW 854
            +G+ G+++A G  +  + Y   GISGGH NPAV+LGL +A ++     + Y++ Q  GAI  A V+            G   A  YG  + G      GY+    L  E++ TF  +  +  +T  +  A        AP+ IG A+ L+HL +IP+T T +NPARS G  +      GW
Sbjct:   34 IGLLGVSFAFGLTVLTMAYTVGGISGGHFNPAVSLGLAVAGRVPAASLVSYVIAQVAGAIIAAAVLYVIATGKADFQLGSFAANGYGEHSPG------GYSLTAALVTEVVMTFFFLIIILGSTHRRVPAG------FAPIAIGLALTLIHLVSIPVTNTSVNPARSTGQALFVG---GW 198          
The following BLAST results are available for this feature:
BLAST of CK935603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
TIP1_MEDTR1.645e-2033.66Probable aquaporin TIP-type OS=Medicago truncatula... [more]
MIP_MOUSE1.645e-2033.50Lens fiber major intrinsic protein OS=Mus musculus... [more]
AQY1_YEAST2.148e-2033.50Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE... [more]
TIP12_MAIZE2.806e-2034.13Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
AQP_HAEIX2.806e-2032.83Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]
AQPZ_BRUSU4.786e-2036.53Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1[more]
MIP_HUMAN6.251e-2033.00Lens fiber major intrinsic protein OS=Homo sapiens... [more]
MIP_CAVPO8.164e-2033.50Lens fiber major intrinsic protein OS=Cavia porcel... [more]
AQY2_YEAST8.164e-2033.33Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE... [more]
AQPZ2_RHIME1.066e-1932.78Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004553_G12 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIF_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935603 ID=CK935603; Name=CK935603; organism=Citrus sinensis; type=EST; length=861bp
GGGGATTCTCATCACAACATCAAACGGCCACAAACAAAAAAGCAAGTGCT
TCTTATTGACTGTTTTGTGTTTTTGAGGGACTAGCAGAAATGGAAGGTAA
AGAAGAGGATGTTAGACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCGA
TTGGGACGGCGGCTCAGACCCAAGATGGGAAGGACTACGTTGAGCCCCCA
CCGGCGCCGCTCTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAG
GGCCGGTATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCG
TACTGACAGTGATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAACCGTC
GGCATTCAAGGGATTGCATGGGCCCTCGGTGGCATGATCTTCGTGCTCGT
TTACTGCACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACAC
TCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTAC
ATGGTGATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTAAAGGG
TTTCATGGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCG
TAGCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGT
ACTTTTGTTCTTGTCTACACAGTTTTCTCTGCCACTGATGCCAAACGGAG
CGCCAGGGACTCTCATGTTCCTATTTTGGCTCCTCTGCCGATTGGGTTCG
CTGTGTTTTTGGTTCACTTGGCTACCATCCCAATTACCGGAACTGGCATC
AACCCAGCGAGGAGTCTTGGAGCTGNCATCATCTACAACAAGGACCGCGG
TTGGGATNNNN
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