CK935608

Overview
NameCK935608
Unique NameCK935608
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1834 contig Csv1_Contig1834:1..810. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935608 vs. ExPASy Swiss-Prot
Match: GDL42_ARATH (GDSL esterase/lipase At2g30310 OS=Arabidopsis thaliana GN=At2g30310 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 9.074e-42
Identity = 83/206 (40.29%), Postives = 123/206 (59.71%), Query Frame = 1
Query:  148 PLVPAIITFGDSAVDVGNNNYLA-TLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVY-TPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAART 759
            PL PAI+ FGDS VD GNNNY + T+FKA + PYG D   H+  GR+ NGK+ +D  A  L  K   P +L P  + ++++ G +FASAG+GYDDR+S  + AI ++QQ   ++ Y ++L  + G K++  II +A+ ++ +G  DF+ N+Y  P     Y T   Y   ++     F++ +Y LG R   V  LPP+GCLP   T
Sbjct:   30 PLFPAILIFGDSTVDTGNNNYHSQTIFKAKHLPYGVDLPGHEANGRYSNGKVISDVIASKLNIKELVPPFLQPNISHQDIVTGVSFASAGAGYDDRSSLSSKAIPVSQQPSMFKNYIARLKGIVGDKKAMEIINNALVVISAGPNDFILNFYDIPTRRLEYPTIHGYQEFILKRLDGFVRELYSLGCRNIVVGGLPPMGCLPIQMT 235          
BLAST of CK935608 vs. ExPASy Swiss-Prot
Match: EXL3_ARATH (GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana GN=EXL3 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 9.074e-42
Identity = 85/220 (38.64%), Postives = 125/220 (56.82%), Query Frame = 1
Query:  151 LVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDA 810
            ++PA+I FGDS VD G NN + T+ K ++ PYG +F +   TGRFC+G++  D  A+ LG K+  PAYL P    K+LL G +FAS GSGYD  T  L   ISL  QL Y+ EY  K+  + G  +   I+ ++++++ +GS D    YY        Y  + Y++++ +  S F+  +YG G R+  V   PP+GC+P+ RTL G     C    N  A
Sbjct:   40 IIPAVIAFGDSIVDTGMNNNVKTVVKCDFLPYGINFQSGVATGRFCDGRVPADLLAEELGIKSIVPAYLDPNLKSKDLLTGVSFASGGSGYDPITPKLVAVISLEDQLSYFEEYIEKVKNIVGEARKDFIVANSLFLLVAGSDDIANTYY-TLRARPEYDVDSYTTLMSDSASEFVTKLYGYGVRRVAVFGAPPIGCVPSQRTLGGGILRDCADNYNEAA 258          
BLAST of CK935608 vs. ExPASy Swiss-Prot
Match: EXL1_ARATH (GDSL esterase/lipase EXL1 OS=Arabidopsis thaliana GN=EXL1 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.185e-41
Identity = 89/220 (40.45%), Postives = 129/220 (58.64%), Query Frame = 1
Query:  154 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLN-HAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDA 810
            VPA+I FGDS VD GNN+ + T  + +Y PYG DF     TGRF NGK+  D  A+ LG K   PAY +P    + LL G  FAS G+GY   T+ +    I L QQL Y+ EY  KL ++ G K++  IIK+++++V  GS D   +++  P +   YT   +++++ +   SF + +YG GAR+  V   PP+GC+P+ RT+ G     CV+R N  A
Sbjct:   50 VPAVIVFGDSIVDAGNNDDMITEARCDYAPYGIDFDGGVATGRFSNGKVPGDIVAEELGIKPNIPAYRNPNLKPEELLTGVTFASGGAGYVPLTTKIAVGGIPLPQQLIYFEEYIEKLKQMVGEKRTKFIIKNSLFVVICGSNDIANDFFTLPPVRLHYTVASFTALMADNARSFAQTLYGYGARRILVFGAPPIGCVPSQRTVAGGPTRDCVARFNDAA 269          
BLAST of CK935608 vs. ExPASy Swiss-Prot
Match: GDL43_ARATH (GDSL esterase/lipase At2g31540 OS=Arabidopsis thaliana GN=At2g31540 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.003e-40
Identity = 85/206 (41.26%), Postives = 120/206 (58.25%), Query Frame = 1
Query:  148 PLVPAIITFGDSAVDVGNNNY-LATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYT-PEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAART 759
            PL PAI+ FGDS VD GNNNY L T+F+A + PYG D  + +  GRF NGKL +D  A  L  K + P +L P  + +++L G  FASAG+GYDD TS    AI +++Q   ++ Y ++L  + G K++  II +A  +V +G  DF+ NYY  P     Y     Y   ++    +F++ +Y LG R   V  LPP+GCLP   T
Sbjct:   31 PLFPAILIFGDSTVDTGNNNYPLPTIFRAEHFPYGMDLPDGKANGRFSNGKLISDIIATKLNIKEFIPPFLQPNLSDQDILTGVCFASAGAGYDDLTSLSTQAIRVSEQPNMFKSYIARLKGIVGDKKAMEIINNAFVVVSAGPNDFILNYYEIPSRRLEYPFISGYQDFILKRLENFVRELYSLGVRNVLVGGLPPMGCLPIHMT 236          
BLAST of CK935608 vs. ExPASy Swiss-Prot
Match: GDL55_ARATH (GDSL esterase/lipase At3g43550 OS=Arabidopsis thaliana GN=At3g43550 PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.310e-40
Identity = 86/220 (39.09%), Postives = 128/220 (58.18%), Query Frame = 1
Query:  154 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLF-GYHESGCVSRINTDA 810
            +PA+I FGDS +D GNNN L TL K N+PPYG+D+     TGRF +G++ +D  A+ LG     PAY++P     +LL G  FAS G+GYD  T+ +   IS+  QL Y++EY SK+ +  G +++  I++ + ++V S S D    Y         Y    Y++ L +    F++ ++ LGARK GV S  P+GC+P  RT+F G+   GC   +N  A
Sbjct:   28 IPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKLGLVKTLPAYMNPYLKPHDLLKGVTFASGGTGYDPLTAKIMSVISVWDQLIYFKEYISKIKRHFGEEKAKDILEHSFFLVVSSSNDLAHTYLAQA---HRYDRTSYANFLADSAVHFVRELHKLGARKIGVFSAVPVGCVPLQRTVFGGFFTRGCNQPLNNMA 244          
BLAST of CK935608 vs. ExPASy Swiss-Prot
Match: GDL44_ARATH (GDSL esterase/lipase At2g31550 OS=Arabidopsis thaliana GN=At2g31550 PE=2 SV=3)

HSP 1 Score: 166.777 bits (421), Expect = 1.310e-40
Identity = 85/206 (41.26%), Postives = 120/206 (58.25%), Query Frame = 1
Query:  148 PLVPAIITFGDSAVDVGNNNY-LATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYT-PEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAART 759
            PL PAI+ FGDS VD GNNNY L T+F+A + PYG D  + +  GRF NGKL +D  A  L  K + P +L P  + +++L G  FASAG+GYDD TS    AI +++Q   ++ Y ++L  + G K++  II +A  +V +G  DF+ NYY  P     Y     Y   ++    +F++ +Y LG R   V  LPP+GCLP   T
Sbjct:   31 PLFPAILIFGDSTVDTGNNNYPLPTIFRAEHFPYGMDLPDGKANGRFSNGKLISDIIATKLNIKEFIPPFLQPNLSDQDILTGVCFASAGAGYDDLTSLSTQAIRVSEQPNMFKSYIARLKGIVGDKKAMEIINNAFVVVSAGPNDFILNYYDIPSRRLEYPFISGYQDFILKRLENFVRELYSLGVRNVLVGGLPPMGCLPIHMT 236          
BLAST of CK935608 vs. ExPASy Swiss-Prot
Match: GDL24_ARATH (GDSL esterase/lipase At1g58480 OS=Arabidopsis thaliana GN=At1g58480 PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.919e-40
Identity = 85/220 (38.64%), Postives = 128/220 (58.18%), Query Frame = 1
Query:  154 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLF-GYHESGCVSRINTDA 810
            +PA+I FGDS +D GNNN L TL K N+PPYG+D+     TGRF +G++ +D  A+ LG     PAY++     ++LL G  FAS G+GYD  T+ +   IS+  QL Y++EY SK+ +  G +++  I++ + ++V S S D    Y         Y    Y++ L +    F++ ++ LGARK GV S  P+GC+P  RT+F G+   GC   +N  A
Sbjct:   28 IPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGDATGRFSDGRVPSDLIAEKLGLAKTLPAYMNSYLKPEDLLKGVTFASRGTGYDPLTAKIMSVISVWDQLIYFKEYISKIKRHFGEEKAKDILEHSFFLVVSSSNDLAHTYLAQA---HRYDRTSYANFLADSAVHFVRELHKLGARKIGVFSAVPVGCVPLQRTVFGGFFTRGCNEPLNNMA 244          
BLAST of CK935608 vs. ExPASy Swiss-Prot
Match: GDL26_ARATH (GDSL esterase/lipase At1g59030/At1g59406 OS=Arabidopsis thaliana GN=At1g59030 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.979e-40
Identity = 85/220 (38.64%), Postives = 128/220 (58.18%), Query Frame = 1
Query:  154 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLF-GYHESGCVSRINTDA 810
            +PA+I FGDS +D GNNN L TL K N+PPYG+D+     TGRF +G++ +D  A+ LG     PAY++P    ++LL G  FAS G+GYD  T+ +   IS+  QL  ++EY SK+ +  G +++  I++ + ++V S S D    Y         Y    Y++ L +    F++ ++ LGARK GV S  P+GC+P  RT+F G+   GC   +N  A
Sbjct:   28 IPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKLGLAKTLPAYMNPYLKPEDLLKGVTFASGGTGYDPLTAKIMSVISVWDQLINFKEYISKIKRHFGEEKAKDILEHSFFLVVSSSNDLAHTYLAQ---THRYDRTSYANFLADSAVHFVRELHKLGARKIGVFSAVPVGCVPLQRTVFGGFFTRGCNQPLNNMA 244          
BLAST of CK935608 vs. ExPASy Swiss-Prot
Match: GDL25_ARATH (GDSL esterase/lipase At1g58725 OS=Arabidopsis thaliana GN=At1g58725 PE=2 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 4.979e-40
Identity = 85/220 (38.64%), Postives = 128/220 (58.18%), Query Frame = 1
Query:  154 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLF-GYHESGCVSRINTDA 810
            +PA+I FGDS +D GNNN L TL K N+PPYG+D+     TGRF +G++ +D  A+ LG     PAY++P    ++LL G  FAS G+GYD  T+ +   IS+  QL  ++EY SK+ +  G +++  I++ + ++V S S D    Y         Y    Y++ L +    F++ ++ LGARK GV S  P+GC+P  RT+F G+   GC   +N  A
Sbjct:   28 IPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKLGLAKTLPAYMNPYLKPEDLLKGVTFASGGTGYDPLTAKIMSVISVWDQLINFKEYISKIKRHFGEEKAKDILEHSFFLVVSSSNDLAHTYLAQ---THRYDRTSYANFLADSAVHFVRELHKLGARKIGVFSAVPVGCVPLQRTVFGGFFTRGCNQPLNNMA 244          
BLAST of CK935608 vs. ExPASy Swiss-Prot
Match: GDL56_ARATH (GDSL esterase/lipase At3g43570 OS=Arabidopsis thaliana GN=At3g43570 PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 8.493e-40
Identity = 84/217 (38.71%), Postives = 128/217 (58.99%), Query Frame = 1
Query:  154 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHE-SGCVSRIN 801
            +PA+I FGDS +D GNNN L TL K N+PPYG+D+     TGRF +G++ +D  A+ +G     PAY++P    ++LL G  FAS G+GYD  T+ +   IS+  QL Y++EY SK+ +  G +++  I++ + ++V S S D    Y         Y    Y++ L +    F++ ++ LGA+K GV S  P+GC+P  RT+FG  E  G +  IN
Sbjct:   28 IPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKIGLAKTLPAYMNPYLKPEDLLKGVTFASGGTGYDPLTAKIMSVISVWDQLIYFKEYISKIKRHFGEEKAKDILEHSFFLVVSSSNDLAHTYLAQA---HRYDRTSYANFLADSAVHFVRELHKLGAQKIGVFSAVPVGCVPLQRTVFGDKELDGVILYIN 241          
The following BLAST results are available for this feature:
BLAST of CK935608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
GDL42_ARATH9.074e-4240.29GDSL esterase/lipase At2g30310 OS=Arabidopsis thal... [more]
EXL3_ARATH9.074e-4238.64GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana ... [more]
EXL1_ARATH1.185e-4140.45GDSL esterase/lipase EXL1 OS=Arabidopsis thaliana ... [more]
GDL43_ARATH1.003e-4041.26GDSL esterase/lipase At2g31540 OS=Arabidopsis thal... [more]
GDL55_ARATH1.310e-4039.09GDSL esterase/lipase At3g43550 OS=Arabidopsis thal... [more]
GDL44_ARATH1.310e-4041.26GDSL esterase/lipase At2g31550 OS=Arabidopsis thal... [more]
GDL24_ARATH2.919e-4038.64GDSL esterase/lipase At1g58480 OS=Arabidopsis thal... [more]
GDL26_ARATH4.979e-4038.64GDSL esterase/lipase At1g59030/At1g59406 OS=Arabid... [more]
GDL25_ARATH4.979e-4038.64GDSL esterase/lipase At1g58725 OS=Arabidopsis thal... [more]
GDL56_ARATH8.493e-4038.71GDSL esterase/lipase At3g43570 OS=Arabidopsis thal... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004553_F12 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIF_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935608 ID=CK935608; Name=CK935608; organism=Citrus sinensis; type=EST; length=810bp
GCGGGGAAGATCCAATTCACAGCTAAAAGACNNNACAGCAAAACCAGCTT
AATGAAAGTGGATATGTGTTGCGGGAAAACAGTTCTGTTTGTGGTGCTTG
CATTTGCACTTGCACTTGCAAGCAAAGGGTATGCACAAGATGCAGCACCA
CTTGTTCCTGCAATCATAACATTTGGTGATTCTGCTGTAGATGTTGGAAA
CAACAACTATCTTGCCACCCTTTTCAAGGCTAATTACCCTCCTTATGGAA
GGGACTTTATCAATCATCAACCTACTGGAAGATTTTGCAATGGGAAATTA
GCCACTGACTTCACTGCTGATACCCTAGGCTTTAAGACTTATGCGCCAGC
ATATCTCAGCCCACAGGCTACAGGGAAAAACCTCCTTATTGGAGCCAACT
TTGCTTCAGCGGGATCTGGTTATGATGACAGGACATCCTACTTAAATCAT
GCAATTTCATTGACTCAGCAGTTGCAGTACTATAGAGAGTACCAGAGTAA
GCTAGCAAAGGTAGCCGGTAGCAAACAATCAGCTTCCATAATCAAGGATG
CGATATACATAGTGGGTTCTGGGAGTGGTGACTTTCTTCAGAATTACTAT
GTCAATCCTTTACTTAACAAAGTCTACACTCCTGAGCAGTATAGCTCAAT
GCTTGTCAATATTTTCTCAAGTTTTATTAAGAACATGTATGGATTGGGGG
CAAGAAAATTTGGAGTGACTTCACTGCCACCATTGGGTTGCCTTCCAGCA
GCAAGAACTTTATTTGGATATCACGAGAGCGGCTGTGTCTCTAGAATCAA
TACTGATGCT
back to top