CK935626

Overview
NameCK935626
Unique NameCK935626
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935626 vs. ExPASy Swiss-Prot
Match: DNAJ_BACAN (Chaperone protein dnaJ OS=Bacillus anthracis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.734e-14
Identity = 38/64 (59.38%), Postives = 49/64 (76.56%), Query Frame = 3
Query:  129 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYG 311
            YYE+LG+SK AS+D++KKAYR+ A K HPD   +    EKFKE+ +AYEVLSD +KR  YDQ+G
Sbjct:    6 YYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQFG 69          
BLAST of CK935626 vs. ExPASy Swiss-Prot
Match: DNAJ_BACAC (Chaperone protein dnaJ OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.734e-14
Identity = 38/64 (59.38%), Postives = 49/64 (76.56%), Query Frame = 3
Query:  129 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYG 311
            YYE+LG+SK AS+D++KKAYR+ A K HPD   +    EKFKE+ +AYEVLSD +KR  YDQ+G
Sbjct:    6 YYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQFG 69          
BLAST of CK935626 vs. ExPASy Swiss-Prot
Match: DNAJ_BACAA (Chaperone protein dnaJ OS=Bacillus anthracis (strain A0248) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.734e-14
Identity = 38/64 (59.38%), Postives = 49/64 (76.56%), Query Frame = 3
Query:  129 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYG 311
            YYE+LG+SK AS+D++KKAYR+ A K HPD   +    EKFKE+ +AYEVLSD +KR  YDQ+G
Sbjct:    6 YYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQFG 69          
BLAST of CK935626 vs. ExPASy Swiss-Prot
Match: DNAJ2_THET8 (Chaperone protein dnaJ 2 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=dnaJ2 PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 5.734e-14
Identity = 37/64 (57.81%), Postives = 48/64 (75.00%), Query Frame = 3
Query:  129 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPE---KFKELAQAYEVLSDPEKREIYDQYG 311
            YY ILGV +NA+Q+++K+AY++ A + HPD    PE   KFKE+ +AY VLSDPEKR IYD YG
Sbjct:    7 YYAILGVPRNATQEEIKRAYKRLARQYHPDVNKSPEAEEKFKEINEAYAVLSDPEKRRIYDTYG 70          
BLAST of CK935626 vs. ExPASy Swiss-Prot
Match: DNAJ_PSYWF (Chaperone protein dnaJ OS=Psychrobacter sp. (strain PRwf-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.489e-14
Identity = 61/212 (28.77%), Postives = 95/212 (44.81%), Query Frame = 3
Query:  129 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYG----EDALKEXXXXXXXAHDPFDI--XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKV-------SIRHLGPS---MIQQMQHPCNECKGTGETINDKDR 704
            +YE+LGV ++A + ++KKAYRK A+K HPD+  D     EKFKE + AYEVLSD EKR  YD+ G    E+ +         A +  DI                          D+ + +++SLE+   G  K++S +                         G   +V       +++   P+     Q++++PCN+C GTG  + DK R
Sbjct:    6 FYEVLGVDRSADEREIKKAYRKLAMKYHPDRNSDDPDAEEKFKEASMAYEVLSDKEKRSAYDRMGHAAFENGMGGGGFGGAGAGNFQDIFGDIFGNFGDIFGQSRGGGGRQRRGSDLRYVIELSLEEAVRGCKKEISFTAPAPCETCDGKGAKNASDIQTCSTCGGHGQVRMQQGFFAVQQTCPNCGGSGQEIKNPCNDCHGTG--VKDKSR 215          
BLAST of CK935626 vs. ExPASy Swiss-Prot
Match: DNAJ_PROMM (Chaperone protein dnaJ OS=Prochlorococcus marinus (strain MIT 9313) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.489e-14
Identity = 38/68 (55.88%), Postives = 50/68 (73.53%), Query Frame = 3
Query:  129 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDAL 323
            YY++LGVSK+A  D LK+AYR+ A + HPD   DP   ++FKE+ +AYEVLSDP+ R  YDQ+GE  L
Sbjct:    4 YYDLLGVSKDADGDTLKRAYRRLARQYHPDINKDPGAEDRFKEIGRAYEVLSDPQTRGRYDQFGEAGL 71          
BLAST of CK935626 vs. ExPASy Swiss-Prot
Match: DNAJ_LACRJ (Chaperone protein dnaJ OS=Lactobacillus reuteri (strain JCM 1112) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.489e-14
Identity = 37/64 (57.81%), Postives = 49/64 (76.56%), Query Frame = 3
Query:  129 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYG 311
            YY+ILGVSK+AS+ D+K+AYR+ A K HPD   +P   EKFK++ +AYE LSD +KR  YDQ+G
Sbjct:    6 YYDILGVSKDASEKDIKRAYRRLAAKYHPDVNHEPGAEEKFKKINEAYETLSDSQKRAQYDQFG 69          
BLAST of CK935626 vs. ExPASy Swiss-Prot
Match: DNAJ_LACRD (Chaperone protein dnaJ OS=Lactobacillus reuteri (strain DSM 20016) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.489e-14
Identity = 37/64 (57.81%), Postives = 49/64 (76.56%), Query Frame = 3
Query:  129 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYG 311
            YY+ILGVSK+AS+ D+K+AYR+ A K HPD   +P   EKFK++ +AYE LSD +KR  YDQ+G
Sbjct:    6 YYDILGVSKDASEKDIKRAYRRLAAKYHPDVNHEPGAEEKFKKINEAYETLSDSQKRAQYDQFG 69          
BLAST of CK935626 vs. ExPASy Swiss-Prot
Match: DNAJ_DESHY (Chaperone protein dnaJ OS=Desulfitobacterium hafniense (strain Y51) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.489e-14
Identity = 64/217 (29.49%), Postives = 91/217 (41.94%), Query Frame = 3
Query:  129 YYEILGVSKNASQDDLKKAYRKAAIKNHPD-KGGD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPF----DIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSR-NVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKSL 752
            YYE+LGVSK+A + ++KKAYRK A + HPD   GD    EKFKE  +AY+VLSD EKR  YDQ G  A              F    DI                        D+ + L ++ E+   GT K++ + R                         G+G +V      P    Q    C  C G+G+ I+    C +C G+   ++ K++
Sbjct:    5 YYEVLGVSKSADEQEIKKAYRKLARQYHPDVNPGDKDAEEKFKEATEAYDVLSDTEKRARYDQMGHSAFDPNQQGFGGFGGDFGGFGDI--FDMFFGGGGGGGQRRQGPTRGNDLRYDLTITFEEAAFGTEKEIQVPRQETCTECHGSGSAPGTHPTTCSQCHGTG-QVKATQRTPFGAIQTARTCPACNGSGQFISSP--CKECSGKGTTRKVKTI 216          
BLAST of CK935626 vs. ExPASy Swiss-Prot
Match: DNAJ_DESHD (Chaperone protein dnaJ OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.489e-14
Identity = 64/217 (29.49%), Postives = 91/217 (41.94%), Query Frame = 3
Query:  129 YYEILGVSKNASQDDLKKAYRKAAIKNHPD-KGGD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPF----DIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSR-NVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKSL 752
            YYE+LGVSK+A + ++KKAYRK A + HPD   GD    EKFKE  +AY+VLSD EKR  YDQ G  A              F    DI                        D+ + L ++ E+   GT K++ + R                         G+G +V      P    Q    C  C G+G+ I+    C +C G+   ++ K++
Sbjct:    5 YYEVLGVSKSADEQEIKKAYRKLARQYHPDVNPGDKDAEEKFKEATEAYDVLSDTEKRARYDQMGHSAFDPNQQGFGGFGGDFGGFGDI--FDMFFGGGGGGGQRRQGPTRGNDLRYDLTITFEEAAFGTEKEIQVPRQETCTECHGSGSAPGTHPTTCSQCHGTG-QVKATQRTPFGAIQTARTCPACNGSGQFISSP--CKECSGKGTTRKVKTI 216          
The following BLAST results are available for this feature:
BLAST of CK935626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_BACAN5.734e-1459.38Chaperone protein dnaJ OS=Bacillus anthracis GN=dn... [more]
DNAJ_BACAC5.734e-1459.38Chaperone protein dnaJ OS=Bacillus anthracis (stra... [more]
DNAJ_BACAA5.734e-1459.38Chaperone protein dnaJ OS=Bacillus anthracis (stra... [more]
DNAJ2_THET85.734e-1457.81Chaperone protein dnaJ 2 OS=Thermus thermophilus (... [more]
DNAJ_PSYWF7.489e-1428.77Chaperone protein dnaJ OS=Psychrobacter sp. (strai... [more]
DNAJ_PROMM7.489e-1455.88Chaperone protein dnaJ OS=Prochlorococcus marinus ... [more]
DNAJ_LACRJ7.489e-1457.81Chaperone protein dnaJ OS=Lactobacillus reuteri (s... [more]
DNAJ_LACRD7.489e-1457.81Chaperone protein dnaJ OS=Lactobacillus reuteri (s... [more]
DNAJ_DESHY7.489e-1429.49Chaperone protein dnaJ OS=Desulfitobacterium hafni... [more]
DNAJ_DESHD7.489e-1429.49Chaperone protein dnaJ OS=Desulfitobacterium hafni... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004553_E01 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIF_E01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935626 ID=CK935626; Name=CK935626; organism=Citrus sinensis; type=EST; length=928bp
GGGTCCAACGTTTCTTCTTCCTCTCTCTTTCTGTTCGCTCGCTCGCCGTC
TCGCGTCTACTCTGAAGATCTGAATTTTTTTAGTACAAGATGTTCGGAAG
AGCGCCAAAGAAAAGCGATAACACAAAGTACTATGAGATTCTCGGAGTCT
CAAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTTATAGGAAAGCCGCC
ATCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGAAGTTTAAAGAGTT
GGCACAAGCGTATGAGGTTCTGAGTGACCCAGAGAAGCGTGAAATATATG
ATCAATACGGCGAGGATGCGCTTAAGGAGGGAATGGGTGGTGGTGGTGGT
GCCCATGACCCATTCGACATATTCCAATCCTTCTTCGGTGGCAGCCCATT
TGGTGGTGGGAGCAGCAGAGGAAGAAGGCAAAGGAGGGGAGAGGATGTAA
TCCATCCCCTCAAGGTTTCTTTGGAGGATCTCTACAATGGGACATCTAAG
AAGCTCTCGCTCTCCCGCAATGTAATCTGCACCAAGTGCAAAGGGAAGGG
GTCTAAGTCAGGTGCATCAATGAAATGTTCTGGCTGCCAGGGATCTGGAA
TGAAAGTTTCAATAAGACACCTTGGCCCCTCTATGATTCAACAAATGCAG
CATCCTTGCAATGAGTGCAAGGGTACTGGAGAAACAATCAATGACAAGGA
TCGCTGCCCACAATGTAAGGGTGAGAAGGTCATTCAGGAGAAAAAAAGTC
TTGGAGGTTATTGTTGAGAAGGGGATGCAAAATGGACAGAAGATTACGTT
CCCTGGAGAAGCTGATGAAGCGCCCGACACTGTCACAGGTGACATTGTAT
TTGTTCTANCACAGAAAGAGCACCCGAAATTTAAGCGAAANNNNNNTGAC
CTATTTGTTGAGCANNNCCTGTCACTGA
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