CK935626

Overview
NameCK935626
Unique NameCK935626
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK935626_ssr336 microsatellite CK935626_ssr336:336..350. BLAST: Citrus ESTs to Prunus persica proteins V1
CK935626_ssr35 microsatellite CK935626_ssr35:35..46. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig760 contig Csv1_Contig760:37..965. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935626 vs. ExPASy Swiss-Prot
Match: DNAJ_SHEB9 (Chaperone protein dnaJ OS=Shewanella baltica (strain OS195) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.367e-18
Identity = 64/227 (28.19%), Postives = 100/227 (44.05%), Query Frame = 3
Query:  129 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGE---DALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHL------GPSMIQQ------MQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKSL 752
            YYE+LGVS++ S+ ++KKAY++ A+K HPD+  GD      FKE+ +AYE+L+D +K+  YDQ+G    D  +          D  DI                        D+ + L++SLE+   G +K+L +                         +GSG K            G   +Q       +Q PC  C G G+ I  KD C +C G+  +++ K+L
Sbjct:    6 YYEVLGVSRDTSEREIKKAYKRLAMKFHPDRNPGDKTAEANFKEIKEAYEILTDADKKAAYDQFGHAGVDPNRGGGGYGGGQGDFGDIFGDVFGDIFGGGRRGGQRQAARGSDLRYNLELSLEEAVKGLTKELRI----------------PTLATCDLCEGSGAKKGTSATTCGTCHGQGQVQMRQGFFAVQQPCPTCHGRGKII--KDPCSKCHGDGRVEKSKTL 214          

HSP 2 Score: 27.335 bits (59), Expect = 8.367e-18
Identity = 16/59 (27.12%), Postives = 26/59 (44.07%), Query Frame = 1
Query:  751 LEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLXQKEHPKFKRXXXDLFVEXXLS 924
            L V +  G+  G +I   GE +        GD+   +  +EH  F R   +L+ E  +S
Sbjct:  214 LSVKIPAGVDTGDRIRLAGEGEAGEFGAPPGDLYVQVSVREHAIFVRDGNNLYCEVPIS 272          
BLAST of CK935626 vs. ExPASy Swiss-Prot
Match: DNAJ_PHOLL (Chaperone protein dnaJ OS=Photorhabdus luminescens subsp. laumondii GN=dnaJ PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.548e-18
Identity = 68/213 (31.92%), Postives = 105/213 (49.30%), Query Frame = 3
Query:  129 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSL-SRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKSL 752
            YYE+LGVSK AS+ ++KKAY++ A+K HPD+  GD E   +FKE+ +AYE+L+D +KR  YDQYG  A ++       A D  DI                        D+ + ++++LE+   G +K++ + +                        QG+G +V +R  G   +QQ   PC  C G G+ I  KD C +C G   ++  K+L
Sbjct:    6 YYEVLGVSKTASEKEIKKAYKRLAMKYHPDRNQGDKEAESQFKEVKEAYEILTDDQKRAAYDQYGHAAFEQGGMGGGGA-DFSDI--FGDVFGDIFGGGRRQQRPSRGADLRYSMELTLEEAVRGVTKEIRIPTLETCDICHGSGAKAGTSPVTCSTCQGAG-QVHMRQ-GFFTVQQ---PCPHCHGRGQII--KDSCHKCHGHGRVERYKTL 208          
BLAST of CK935626 vs. ExPASy Swiss-Prot
Match: DNAJ1_DROME (DnaJ protein homolog 1 OS=Drosophila melanogaster GN=DnaJ-1 PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 8.548e-18
Identity = 42/69 (60.87%), Postives = 55/69 (79.71%), Query Frame = 3
Query:  129 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALK 326
            +Y+ILG+ + AS D++KKAYRK A+K HPDK   P   E+FKE+A+AYEVLSD +KR+I+D YGED LK
Sbjct:    5 FYKILGLERKASDDEIKKAYRKLALKYHPDKNKSPQAEERFKEIAEAYEVLSDKKKRDIFDNYGEDGLK 73          
BLAST of CK935626 vs. ExPASy Swiss-Prot
Match: DNAJ_RALME (Chaperone protein dnaJ OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.116e-17
Identity = 42/65 (64.62%), Postives = 52/65 (80.00%), Query Frame = 3
Query:  129 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYG 311
            YYE+LGV KNAS D++KKAYRK A+K+HPD+  D     EKFKE+ +AYE+LSDPEK+  YDQYG
Sbjct:    6 YYEVLGVGKNASDDEIKKAYRKLAMKHHPDRNPDNKEAEEKFKEVKEAYEMLSDPEKKAAYDQYG 70          
BLAST of CK935626 vs. ExPASy Swiss-Prot
Match: DNAJ_PELCD (Chaperone protein dnaJ OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.116e-17
Identity = 65/220 (29.55%), Postives = 99/220 (45.00%), Query Frame = 3
Query:  129 YYEILGVSKNASQDDLKKAYRKAAIKNHPDK-GGD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALK------EXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRN-VIXXXXXXXXXXXXXXXXXXXXQGSG-MKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKSL 752
            YYE+LGV +NAS+ ++KKAYRK AIK HPDK  GD    +KFKE+++AY +LSD ++R IYDQYG   L                  PF+                        +D+ + L ++ E+   G   K+ + R+                       QG+G ++V   +        +  PC EC G G+ I+    C +C G   ++ K++L
Sbjct:    6 YYEVLGVHRNASETEIKKAYRKLAIKYHPDKNAGDKAAEDKFKEISEAYSILSDTQQRVIYDQYGHAGLNGGGGGGGSYSSGGFGGTPFEDLFGDIFGDIFGGRGSQRSRGRRGDDLRYNLSINFEEAAFGLETKIQIPRHQTCGTCDGIGAKPGTTPRVCPTCQGAGQVRVQQGYF------SLTRPCPECNGEGQIIDQP--CEECHGSGRVRGKRTL 217          
BLAST of CK935626 vs. ExPASy Swiss-Prot
Match: DNJ6A_XENLA (DnaJ homolog subfamily B member 6-A OS=Xenopus laevis GN=dnajb6-A PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.458e-17
Identity = 44/85 (51.76%), Postives = 58/85 (68.24%), Query Frame = 3
Query:  126 KYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPF 365
            +YYE+LGV +NAS DD+KKAYR+ A+K HPDK  D       +FKE+A+AYEVLSD +KR+IYD+YG++ L            PF
Sbjct:    3 EYYEVLGVQRNASADDIKKAYRRLALKWHPDKNPDNKDEAERRFKEVAEAYEVLSDSKKRDIYDKYGKEGLTNRGGGSHFDEAPF 87          
BLAST of CK935626 vs. ExPASy Swiss-Prot
Match: DNAJ_STRA1 (Chaperone protein dnaJ OS=Streptococcus agalactiae serotype Ia GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.458e-17
Identity = 63/206 (30.58%), Postives = 98/206 (47.57%), Query Frame = 3
Query:  117 DNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSR-NVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKG 722
            +NT++Y+ LGVSK+ASQD++KKAYR+ + K HPD   + G  EK+KE+ +AYE LSD +KR  YDQYG  A              F                         +D+ + + +S E+   G  K++S +R +                       GSG+ +++    P    + Q  C+ C+G+G+ I  K++CP C G
Sbjct:    2 NNTEFYDRLGVSKDASQDEIKKAYRRMSKKYHPDINKEAGAEEKYKEVQEAYETLSDTQKRAAYDQYG--AAGANGGFGGFDGGGFGGFEDIFSSFFGGGGMRNPNAPRQGDDLQYRVNLSFEEAIFGAEKEVSYNRESSCHTCSGSGAKPGTSPVTCQKCHGSGV-INVDTQTPLGTMRRQVTCDVCQGSGQEI--KEKCPTCHG 202          
BLAST of CK935626 vs. ExPASy Swiss-Prot
Match: DNAJ_PICTO (Chaperone protein dnaJ OS=Picrophilus torridus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.458e-17
Identity = 66/211 (31.28%), Postives = 86/211 (40.76%), Query Frame = 3
Query:  129 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXE---DVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQM-------------QHPCNECKGTGETINDKD 701
            YY ILGV +NASQDD+KKA+R+ A K HPD         EKFKE+A+AYEVLSDP+KR+ YD+ G                 FD                        +   D+   + +SLED Y G SK +   RN +                     GSG +   R  G   +  +             Q PC  C GTG    ++D
Sbjct:    5 YYAILGVDRNASQDDIKKAFRELAKKYHPDANPGNKEAEEKFKEIAEAYEVLSDPQKRKQYDETGTTDFNAGSGFNWQDFTHFDDINDIFNQFFGGNFGDTFFGGYTNQPDLDIYLRVNISLEDAYYGASKNVKYRRNAMCEHCSGTGAENKVLITCPTCHGSGQERITRGQGFFRMVTVTECRTCHGRGKIPQKPCTVCHGTGTVSKNED 215          
BLAST of CK935626 vs. ExPASy Swiss-Prot
Match: DNAJ_EHRRW (Chaperone protein dnaJ OS=Ehrlichia ruminantium (strain Welgevonden) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.458e-17
Identity = 72/238 (30.25%), Postives = 111/238 (46.64%), Query Frame = 3
Query:  111 KSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKE------XXXXXXXAHDPFDI--XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHL--------GPSMIQQ----MQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKSL 752
            KSD   YY++LG+SKNA+ +++KKAYRK A+K HPDK  GD    EKFKEL++AY+VL D +KR  YD+YG  A  +             + D  DI                          D+   ++++LED +NGT   ++   +V                      GSG + S++ +        G    QQ    ++  C+ C G GE I  K++C +C G   ++++ +L
Sbjct:    3 KSD---YYDLLGLSKNATPEEIKKAYRKMALKYHPDKNPGDKAAEEKFKELSEAYDVLIDKDKRAAYDRYGHSAFSDGSGRGGFDFNSGFSTDFSDIFNDLFGGGFRGGRSSSKRQDGGTVGSDLRLDIEITLEDSFNGTKVPINYVTHV----------------KCSSCSGSGSEGSVKSVQCNTCHGAGNIRTQQGFFTIERTCHVCNGEGEII--KNKCKKCSGSGRVRDEVNL 219          
BLAST of CK935626 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOPH (Chaperone protein dnaJ OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.458e-17
Identity = 67/223 (30.04%), Postives = 101/223 (45.29%), Query Frame = 3
Query:  114 SDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKE----XXXXXXXAHDPFDI-XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLS-RNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKSL 752
            +D   YYE+LG+SK+AS D++KKAYRK A + HPD   GD     KFKE ++AY VLSDPEK+  +DQ+G  A ++             D  DI                         ++   ++++ E+   G  K+L LS ++                       G G     +     M++ +Q  C +C+GTG+ I  K++CP C G   I  KK +
Sbjct:    2 ADKRDYYEVLGISKSASDDEIKKAYRKLAKQYHPDANPGDQTAEAKFKEASEAYAVLSDPEKKRQFDQFGHAAFEQGGGGAGGFDFNMGDMGDIFGDIFGDIFGGGRRSRASNGPMNGANLRTAIRITFEEAVFGCEKELELSLKDECETCHGSGAKPGSSAETCHKCNGKGQVTFTQQSLFGMVRNVQ-TCPDCRGTGKII--KEKCPDCYGSGYISRKKKI 221          
The following BLAST results are available for this feature:
BLAST of CK935626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_SHEB98.367e-1828.19Chaperone protein dnaJ OS=Shewanella baltica (stra... [more]
DNAJ_PHOLL8.548e-1831.92Chaperone protein dnaJ OS=Photorhabdus luminescens... [more]
DNAJ1_DROME8.548e-1860.87DnaJ protein homolog 1 OS=Drosophila melanogaster ... [more]
DNAJ_RALME1.116e-1764.62Chaperone protein dnaJ OS=Ralstonia metallidurans ... [more]
DNAJ_PELCD1.116e-1729.55Chaperone protein dnaJ OS=Pelobacter carbinolicus ... [more]
DNJ6A_XENLA1.458e-1751.76DnaJ homolog subfamily B member 6-A OS=Xenopus lae... [more]
DNAJ_STRA11.458e-1730.58Chaperone protein dnaJ OS=Streptococcus agalactiae... [more]
DNAJ_PICTO1.458e-1731.28Chaperone protein dnaJ OS=Picrophilus torridus GN=... [more]
DNAJ_EHRRW1.458e-1730.25Chaperone protein dnaJ OS=Ehrlichia ruminantium (s... [more]
DNAJ_CLOPH1.458e-1730.04Chaperone protein dnaJ OS=Clostridium phytoferment... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004553_E01 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIF_E01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935626 ID=CK935626; Name=CK935626; organism=Citrus sinensis; type=EST; length=928bp
GGGTCCAACGTTTCTTCTTCCTCTCTCTTTCTGTTCGCTCGCTCGCCGTC
TCGCGTCTACTCTGAAGATCTGAATTTTTTTAGTACAAGATGTTCGGAAG
AGCGCCAAAGAAAAGCGATAACACAAAGTACTATGAGATTCTCGGAGTCT
CAAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTTATAGGAAAGCCGCC
ATCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGAAGTTTAAAGAGTT
GGCACAAGCGTATGAGGTTCTGAGTGACCCAGAGAAGCGTGAAATATATG
ATCAATACGGCGAGGATGCGCTTAAGGAGGGAATGGGTGGTGGTGGTGGT
GCCCATGACCCATTCGACATATTCCAATCCTTCTTCGGTGGCAGCCCATT
TGGTGGTGGGAGCAGCAGAGGAAGAAGGCAAAGGAGGGGAGAGGATGTAA
TCCATCCCCTCAAGGTTTCTTTGGAGGATCTCTACAATGGGACATCTAAG
AAGCTCTCGCTCTCCCGCAATGTAATCTGCACCAAGTGCAAAGGGAAGGG
GTCTAAGTCAGGTGCATCAATGAAATGTTCTGGCTGCCAGGGATCTGGAA
TGAAAGTTTCAATAAGACACCTTGGCCCCTCTATGATTCAACAAATGCAG
CATCCTTGCAATGAGTGCAAGGGTACTGGAGAAACAATCAATGACAAGGA
TCGCTGCCCACAATGTAAGGGTGAGAAGGTCATTCAGGAGAAAAAAAGTC
TTGGAGGTTATTGTTGAGAAGGGGATGCAAAATGGACAGAAGATTACGTT
CCCTGGAGAAGCTGATGAAGCGCCCGACACTGTCACAGGTGACATTGTAT
TTGTTCTANCACAGAAAGAGCACCCGAAATTTAAGCGAAANNNNNNTGAC
CTATTTGTTGAGCANNNCCTGTCACTGA
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