CK935627

Overview
NameCK935627
Unique NameCK935627
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length625
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935627 vs. ExPASy Swiss-Prot
Match: 6PGL1_ARATH (Probable 6-phosphogluconolactonase 1 OS=Arabidopsis thaliana GN=At1g13700 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 6.973e-32
Identity = 69/146 (47.26%), Postives = 96/146 (65.75%), Query Frame = 1
Query:    4 DALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGN---NQNSDLLPVQMA-SAEEEFTWFLDKDATSKL 429
            D +SAE AA +YE  ++ + +S  +A S  +  P+FDL+LLGMG DGH+ASLFP HP L+  + WVTF+ DS KPPPERITFT PVINS+A + +V  G  K++A+  A+ +     +S  LP ++   +     WF+DK A SKL
Sbjct:  116 DTVSAEEAATEYEFAIRQMVRSRTVAASDNSDSPRFDLILLGMGSDGHVASLFPNHPALEVKDDWVTFLTDSHKPPPERITFTLPVINSAANVVVVATGESKANAIHLAIDDLPLPDSSLSLPARLVHPSNGNLIWFMDKQAGSKL 261          
BLAST of CK935627 vs. ExPASy Swiss-Prot
Match: 6PGL1_ORYSJ (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. japonica GN=Os03g0416500 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.527e-30
Identity = 67/146 (45.89%), Postives = 92/146 (63.01%), Query Frame = 1
Query:    4 DALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGN---NQNSDLLPVQMAS-AEEEFTWFLDKDATSKL 429
            D ++ E AA DYE  ++ L K   +  S +   PKFDL+LL +G DGH+ASLFP HP L+  + WVT+I DSP PPPERITFT PVINS++ IA+V  G  K+ AV  A+ +     ++  +P +M    + +  WFLDK + S L
Sbjct:  137 DNVTVEDAATDYEFVIRQLVKIRTVGVSESNDCPKFDLILLSIGSDGHVASLFPNHPALELKDDWVTYITDSPVPPPERITFTLPVINSASNIAVVATGEDKAKAVYFAISDGTEGPDAPSIPARMVQPTDGKLVWFLDKASASFL 282          
BLAST of CK935627 vs. ExPASy Swiss-Prot
Match: 6PGL1_ORYSI (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. indica GN=OsI_011697 PE=3 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 6.527e-30
Identity = 67/146 (45.89%), Postives = 92/146 (63.01%), Query Frame = 1
Query:    4 DALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGN---NQNSDLLPVQMAS-AEEEFTWFLDKDATSKL 429
            D ++ E AA DYE  ++ L K   +  S +   PKFDL+LL +G DGH+ASLFP HP L+  + WVT+I DSP PPPERITFT PVINS++ IA+V  G  K+ AV  A+ +     ++  +P +M    + +  WFLDK + S L
Sbjct:  137 DNVTVEDAATDYEFVIRQLVKIRTVGVSESNDCPKFDLILLSIGSDGHVASLFPNHPALELKDDWVTYITDSPVPPPERITFTLPVINSASNIAVVATGEDKAKAVYFAISDGAEGPDAPSIPARMVQPTDGKLVWFLDKASASFL 282          
BLAST of CK935627 vs. ExPASy Swiss-Prot
Match: 6PGL_RAT (6-phosphogluconolactonase OS=Rattus norvegicus GN=Pgls PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.402e-24
Identity = 61/141 (43.26%), Postives = 82/141 (58.16%), Query Frame = 1
Query:    7 ALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 429
            AL  E AAEDY   L+   + + +        P FDL++LG+GPDGH  SLFPGHPLL+E EK V  I DSPKPPP+R+T T PV+N++  +  V  G GK++ ++  L  +Q S L    +        WFLD+ A   L
Sbjct:  116 ALPVEDAAEDYARKLRQAFQGDTV--------PVFDLLILGVGPDGHTCSLFPGHPLLQEREKIVAPIGDSPKPPPQRVTLTLPVLNAAQSVIFVATGEGKAAVLKRIL-EDQESALPAAMVQPRTGALCWFLDEAAARLL 247          
BLAST of CK935627 vs. ExPASy Swiss-Prot
Match: 6PGL_BOVIN (6-phosphogluconolactonase OS=Bos taurus GN=PGLS PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.137e-24
Identity = 58/141 (41.13%), Postives = 83/141 (58.87%), Query Frame = 1
Query:    7 ALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 429
            AL  E AAEDY   L+   + + +        P FDL++LG+GPDGH  SLFP HPLL+E EK V  I DSPKPPP+R+T T PV+N++  +  V  G GK++ ++  L + + + L    +  +  +  WFLD+ A   L
Sbjct:  116 ALPVEEAAEDYAKKLRQAFQGDSI--------PVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAARTVIYVATGEGKAAILKRILEDKEENPLPAALVQPSAGKLCWFLDEAAARLL 248          
BLAST of CK935627 vs. ExPASy Swiss-Prot
Match: 6PGL_HUMAN (6-phosphogluconolactonase OS=Homo sapiens GN=PGLS PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.192e-23
Identity = 57/140 (40.71%), Postives = 81/140 (57.86%), Query Frame = 1
Query:   10 LSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 429
            L  E AAEDY   L+   + + +        P FDL++LG+GPDGH  SLFP HPLL+E EK V  I DSPKPPP+R+T T PV+N++  +  V  G GK++ ++  L + + + L    +     +  WFLD+ A   L
Sbjct:  117 LPVEEAAEDYAKKLRQAFQGDSI--------PVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAARTVIFVATGEGKAAVLKRILEDQEENPLPAALVQPHTGKLCWFLDEAAARLL 248          
BLAST of CK935627 vs. ExPASy Swiss-Prot
Match: 6PGL_MOUSE (6-phosphogluconolactonase OS=Mus musculus GN=Pgls PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.557e-23
Identity = 60/142 (42.25%), Postives = 82/142 (57.75%), Query Frame = 1
Query:    7 ALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEE-EFTWFLDKDATSKL 429
            AL  E AAEDY   L+   + + +        P FDL++LG+GPDGH  SLFP HPLL+E EK V  I DSPKPPP+R+T T PV+N++  I  V  G GK++ ++  L + + +  LP  +         WFLD+ A   L
Sbjct:  116 ALPVEDAAEDYARKLRQALQGDAV--------PVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAAQSIIFVATGEGKAAVLKRILEDKEGT--LPAALVQPRTGALCWFLDEAAARLL 247          
BLAST of CK935627 vs. ExPASy Swiss-Prot
Match: 6PGL_MYCTU (6-phosphogluconolactonase OS=Mycobacterium tuberculosis GN=pgl PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.936e-22
Identity = 57/126 (45.24%), Postives = 74/126 (58.73%), Query Frame = 1
Query:   58 LTKSNILATSAATG--FPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 429
            L    +LA SAA G   P FD+ LLGMGP+GHI SLFP  P + E+ + V  + DSPKPPP RIT T P I  S  + ++V G GK+ AV  A+G   +   +P   A   +   W LD+DA +KL
Sbjct:  121 LAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIG-GADPVSVPAAGAVGRQNTLWLLDRDAAAKL 245          
BLAST of CK935627 vs. ExPASy Swiss-Prot
Match: 6PGL_MYCBO (6-phosphogluconolactonase OS=Mycobacterium bovis GN=pgl PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.936e-22
Identity = 57/126 (45.24%), Postives = 74/126 (58.73%), Query Frame = 1
Query:   58 LTKSNILATSAATG--FPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 429
            L    +LA SAA G   P FD+ LLGMGP+GHI SLFP  P + E+ + V  + DSPKPPP RIT T P I  S  + ++V G GK+ AV  A+G   +   +P   A   +   W LD+DA +KL
Sbjct:  121 LAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIG-GADPVSVPAAGAVGRQNTLWLLDRDAAAKL 245          
BLAST of CK935627 vs. ExPASy Swiss-Prot
Match: 6PGL_SCHPO (Probable 6-phosphogluconolactonase OS=Schizosaccharomyces pombe GN=SPCC16C4.10 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.240e-21
Identity = 54/142 (38.03%), Postives = 78/142 (54.93%), Query Frame = 1
Query:   10 LSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEE--EFTWFLDKDATSKL 429
            +  +  A++YE  L H     + A S+    P FDL+LLG GPDGH  SLFP H +L+E+  WV  + DSPKPP +RIT T PV+  +  IA V  GAGK   +   +     +  LP  + +       +WF+D +A++ L
Sbjct:  113 IDPQNVADEYEKQLVH-----VFANSSTVKVPVFDLLLLGCGPDGHTCSLFPDHEVLQEDVAWVAPVTDSPKPPKDRITLTLPVVTHAQAIAFVTTGAGKKDILPIVI--EDFTSKLPSALITRNNLTRTSWFVDDEASANL 247          
The following BLAST results are available for this feature:
BLAST of CK935627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
6PGL1_ARATH6.973e-3247.26Probable 6-phosphogluconolactonase 1 OS=Arabidopsi... [more]
6PGL1_ORYSJ6.527e-3045.89Probable 6-phosphogluconolactonase 1 OS=Oryza sati... [more]
6PGL1_ORYSI6.527e-3045.89Probable 6-phosphogluconolactonase 1 OS=Oryza sati... [more]
6PGL_RAT2.402e-2443.266-phosphogluconolactonase OS=Rattus norvegicus GN=... [more]
6PGL_BOVIN3.137e-2441.136-phosphogluconolactonase OS=Bos taurus GN=PGLS PE... [more]
6PGL_HUMAN1.192e-2340.716-phosphogluconolactonase OS=Homo sapiens GN=PGLS ... [more]
6PGL_MOUSE1.557e-2342.256-phosphogluconolactonase OS=Mus musculus GN=Pgls ... [more]
6PGL_MYCTU2.936e-2245.246-phosphogluconolactonase OS=Mycobacterium tubercu... [more]
6PGL_MYCBO2.936e-2245.246-phosphogluconolactonase OS=Mycobacterium bovis G... [more]
6PGL_SCHPO4.240e-2138.03Probable 6-phosphogluconolactonase OS=Schizosaccha... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004553_E02 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIF_E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935627 ID=CK935627; Name=CK935627; organism=Citrus sinensis; type=EST; length=625bp
GGGGATGCATTATCTGCTGAAGGTGCAGCTGAAGATTATGAGACTTGTCT
CAAGCATTTGACAAAGAGCAATATATTAGCTACATCTGCTGCTACTGGTT
TTCCAAAGTTTGATCTCATGCTTCTGGGTATGGGTCCAGATGGACATATA
GCTTCTCTGTTTCCAGGGCATCCTCTTCTCAAGGAGAATGAAAAATGGGT
TACTTTCATTAAAGACTCGCCAAAGCCACCTCCAGAGAGAATCACTTTCA
CCTTCCCTGTAATCAACTCATCTGCATATATTGCAATGGTGGTGTGTGGT
GCTGGAAAATCAAGTGCAGTTCAAACTGCATTGGGTAATAATCAAAACTC
TGATTTGCTGCCAGTTCAAATGGCATCGGCTGAAGAAGAATTTACTTGGT
TTCTTGACAAAGACGCGACTTCAAAGCTGTAAGAGTCGGAACAATTAGCT
GTATGCGTGAATCCCTGTTATCTGCTATGATAATTGGTTTGATCTGTGTG
GTTTGACTACTAGTACTGCTGGATTTTGTTAATGAGAAAAGAGTGAACTT
GTTAATGCAAGTGAAAAAGATTTGAATAAATATAGTTTGATATTTTAAAA
AAAAAAAAAAAAAAAAAAAAAAAAA
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