CK935640

Overview
NameCK935640
Unique NameCK935640
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935640 vs. ExPASy Swiss-Prot
Match: APTH1_GIBZE (Acyl-protein thioesterase 1 OS=Gibberella zeae GN=FG06404 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.020e-23
Identity = 64/211 (30.33%), Postives = 108/211 (51.18%), Query Frame = 2
Query:  170 ILWLHGLGDSGPA-NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASS---PKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQF--TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEGLRNLESWIKTRM 784
            ++++HGLGD+G      ++      +    K+  P AP  P++ N G  MP WFDI ++     S    +D   +  + +  H +I +E+ +GI P  + + GFSQGGA++L + L    KLGG    S W+  + +  D    T   ++TP++  HG  D  V  E G+     L+  G    +K YPG+GHS   E L  +E++++ ++
Sbjct:   21 VIFVHGLGDTGHGWASAVENWRRRQKMDEVKFILPHAPQIPISVNMGMRMPGWFDIKQLGGDVDSLIRNEDTEGIKLSQKYFHNLIQQEIDSGIVPERIVLGGFSQGGAMSLLAGLTCTSKLGGILGLSSWLLLSKTFADMVKPTDANRQTPVMMFHGEEDPIVPCERGKLSAELLKGLGYDVAWKTYPGMGHSAVPEELDEVEAFLRKQL 231          
BLAST of CK935640 vs. ExPASy Swiss-Prot
Match: APTH1_USTMA (Acyl-protein thioesterase 1 OS=Ustilago maydis GN=UM00130 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.874e-23
Identity = 72/215 (33.49%), Postives = 107/215 (49.77%), Query Frame = 2
Query:  170 ILWLHGLGDSGPA-NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKE---VAAGIDPNNV-----FVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA----GISCEFKAYPGLGHSISNEGLRNLESWIK 775
            + +LHGLGDS    ++  + L   P     ++  P+AP  PVT N G  MPSWFDI  +    S  +DE+ LLK+   +  +I  E    A  +D + +      V GFSQGGA++L + L  P  + G A  S W+P  A +    T  +K   +  +HG AD  V +E GQ    FL+          EF  YP + HS   E +R+L ++++
Sbjct:   21 LFFLHGLGDSSAGWSDVAQMLSQRPSLSHVRFVLPNAPIQPVTLNMGMPMPSWFDILALD-DLSGAEDEAGLLKSTDEIKKLIKAENDGTAKDLDGHKIPSERIVVGGFSQGGAISLLTGLTNPTPVAGVAALSTWLPLRAKIATLRTPTSKTLKVFQAHGDADPVVKYEYGQRTVDFLKNELALNDKDVEFHTYPRMPHSACPEEIRDLAAFLE 234          
BLAST of CK935640 vs. ExPASy Swiss-Prot
Match: LYPA1_HUMAN (Acyl-protein thioesterase 1 OS=Homo sapiens GN=LYPLA1 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.127e-22
Identity = 72/204 (35.29%), Postives = 101/204 (49.51%), Query Frame = 2
Query:  170 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKK-TPILWSHGMADRTVLFEAGQAGPPFLEQA--GISCEFKAYPGLGHSISNEGLRNLESWI 772
            +++LHGLGD+G         F        K+  P AP  PVT N    MPSWFDI  I ++  S +DES + +A  N+ A+ID+EV  GI  N + + GFSQGGAL+L + L   +KL G    S W+P  AS        A +   IL  HG  D  V    G      L+      +  FK Y G+ HS   + + +++ +I
Sbjct:   24 VIFLHGLGDTGHG---WAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDI--IGLSPDSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFPQGPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFI 222          
BLAST of CK935640 vs. ExPASy Swiss-Prot
Match: APTH1_DEBHA (Acyl-protein thioesterase 1 OS=Debaryomyces hansenii GN=DEHA2D06534g PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 1.127e-22
Identity = 69/211 (32.70%), Postives = 106/211 (50.24%), Query Frame = 2
Query:  158 ARNFILWLHGLGDSGPANEPIKTLFTSPEF----KLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAA-GIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGI-SCEFKAYPGLGHSISNEGLRNLESWI 772
            A++ I+++HGLGDSG        L              + FP+AP  P+T N G VMP WFDI+E      + +D     K+   + ++I +++    I  + + + GFSQG A++LA+V L   K+GG    SG+ P   SL         +TPI   HG AD  V F+ G+      ++ G  + +F  YPG+ HS S E L +  ++I
Sbjct:   17 AKSAIIFVHGLGDSGSGWSWFPQLAKQSNIIKNCDSINYVFPNAPLMPITANGGYVMPGWFDIYEFG-NPEAKQDIDGFHKSCETLKSLIKEQIDNHDIPADKIIIGGFSQGAAVSLATVALLDFKVGGVVALSGFSPIKESLPQIMNKANLETPIFQGHGTADPIVNFDFGKQTSELYQKLGFKNVKFHTYPGVAHSASEEELADAMNFI 226          
BLAST of CK935640 vs. ExPASy Swiss-Prot
Match: LYPA1_PONAB (Acyl-protein thioesterase 1 OS=Pongo abelii GN=LYPLA1 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.472e-22
Identity = 72/204 (35.29%), Postives = 101/204 (49.51%), Query Frame = 2
Query:  170 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKK-TPILWSHGMADRTVLFEAGQAGPPFLEQA--GISCEFKAYPGLGHSISNEGLRNLESWI 772
            +++LHGLGD+G         F        K+  P AP  PVT N    MPSWFDI  I ++  S +DES + +A  N+ A+ID+EV  GI  N + + GFSQGGAL+L + L   +KL G    S W+P  AS        A +   IL  HG  D  V    G      L+      +  FK Y G+ HS   + + +++ +I
Sbjct:   24 VIFLHGLGDTGHG---WAEAFAGIRSSHIKYICPHAPVRPVTLNMNMAMPSWFDI--IGLSPDSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFPQGPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFI 222          
BLAST of CK935640 vs. ExPASy Swiss-Prot
Match: LYPA1_RABIT (Acyl-protein thioesterase 1 OS=Oryctolagus cuniculus GN=LYPLA1 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.280e-22
Identity = 71/204 (34.80%), Postives = 101/204 (49.51%), Query Frame = 2
Query:  170 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLID-QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA--GISCEFKAYPGLGHSISNEGLRNLESWI 772
            +++LHGLGD+G           SP  K   +  P AP  PVT N    MPSWFDI  + ++  S +DES + +A   V A+ID+EV  GI  N + + GFSQGGAL+L + L   +KL G    S W+P  AS       S  +   +L  HG  D  V    G      L+      +  FK Y G+ HS   + + +++ +I
Sbjct:   24 VIFLHGLGDTGHGWAEAFAGIKSPHIK---YICPHAPVMPVTLNMNMAMPSWFDI--VGLSPDSQEDESGIKQAAETVKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFSQGPINSANRDISVLQCHGDCDPLVPLMFGSLTVERLKALINPANVTFKIYEGMMHSSCQQEMMDVKHFI 222          
BLAST of CK935640 vs. ExPASy Swiss-Prot
Match: LYPA1_MOUSE (Acyl-protein thioesterase 1 OS=Mus musculus GN=Lypla1 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.280e-22
Identity = 71/204 (34.80%), Postives = 101/204 (49.51%), Query Frame = 2
Query:  170 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLID-QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA--GISCEFKAYPGLGHSISNEGLRNLESWI 772
            +++LHGLGD+G           SP  K   +  P AP  PVT N    MPSWFDI  + ++  S +DES + +A   V A+ID+EV  GI  N + + GFSQGGAL+L + L   +KL G    S W+P  AS       S  +   +L  HG  D  V    G      L+      +  FK Y G+ HS   + + +++ +I
Sbjct:   24 VIFLHGLGDTGHGWAEAFAGIKSPHIK---YICPHAPVMPVTLNMNMAMPSWFDI--VGLSPDSQEDESGIKQAAETVKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFSQGPINSANRDISVLQCHGDCDPLVPLMFGSLTVERLKALINPANVTFKIYEGMMHSSCQQEMMDVKHFI 222          
BLAST of CK935640 vs. ExPASy Swiss-Prot
Match: LYPA1_RAT (Acyl-protein thioesterase 1 OS=Rattus norvegicus GN=Lypla1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.307e-22
Identity = 71/204 (34.80%), Postives = 102/204 (50.00%), Query Frame = 2
Query:  170 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLID-QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA--GISCEFKAYPGLGHSISNEGLRNLESWI 772
            +++LHGLGD+G         F   +    K+  P AP  PVT N   +MPSWFDI  I ++  S +DES + +A   V A+ID+EV  GI  N + + GFSQGGAL+L + L   +KL G    S W+P  AS       S  +   +L  HG  D  V    G      L+      +  FK Y G+ HS   + + +++ +I
Sbjct:   24 VIFLHGLGDTGHG---WAEAFAGIKSSHIKYICPHAPVMPVTLNMSMMMPSWFDI--IGLSPDSQEDESGIKQAAETVKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFSQGPINSANRDISVLQCHGDCDPLVPLMFGSLTVERLKGLVNPANVTFKVYEGMMHSSCQQEMMDVKYFI 222          
BLAST of CK935640 vs. ExPASy Swiss-Prot
Match: APTH1_CANAL (Acyl-protein thioesterase 1 OS=Candida albicans GN=CaO19.4248 PE=3 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.628e-21
Identity = 65/213 (30.52%), Postives = 107/213 (50.23%), Query Frame = 2
Query:  158 ARNFILWLHGLGDSGPANEPIKTLFTSPEF--KLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMI-DKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAK---KTPILWSHGMADRTVLFEAGQAGPPFLEQAGI-SCEFKAYPGLGHSISNEGLRNLESWIK 775
            A+  +++LHGLGDSG     +  L +  +       + FP+AP  PVT N G  MP+WFDI+E+     + +D +   K+   +   I ++     I    + + GFSQG A++LA++ L   K+GG    SG+ P    + D++  +      TPI   HG  D  + ++ G+      +Q G  + +F  Y G+ HS S E L ++  +IK
Sbjct:   15 AKAAVIFLHGLGDSGDGWSWLPQLVSQSKLINDPINYVFPNAPKIPVTINNGFAMPAWFDIYELG-NPHAKQDVTGFFKSCEVLKEFILEQHNKFNIPLEKIIIGGFSQGAAISLATLALLDTKIGGCVALSGFCPVRNEITDRYNKNPGVNFDTPIFQGHGTVDPVINYDYGKQTSELYKQLGFKNLKFNTYEGVAHSASEEELADVIKFIK 226          
BLAST of CK935640 vs. ExPASy Swiss-Prot
Match: LYPA1_BOVIN (Acyl-protein thioesterase 1 OS=Bos taurus GN=LYPLA1 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.736e-21
Identity = 70/204 (34.31%), Postives = 100/204 (49.02%), Query Frame = 2
Query:  170 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKK-TPILWSHGMADRTVLFEAGQAGPPFLEQA--GISCEFKAYPGLGHSISNEGLRNLESWI 772
            +++LHGLGD+G         F        K+  P AP  PVT N    MPSWFDI  I ++  S +DE+ + +A  NV A+ID+EV  GI  N + + GFSQGGAL+L + L   +KL G    S W+P  AS          +   IL  HG  D  V    G      L+      +  F+ Y G+ HS   + + +++ +I
Sbjct:   24 VIFLHGLGDTGHG---WAEAFAGIRSAHIKYICPHAPVMPVTLNMNMAMPSWFDI--IGLSPDSLEDETGIKQAAENVKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFPQGPIGGVNRDISILQCHGDLDPLVPLMFGSLTAEKLKTLVNPANVTFRTYAGMMHSSCQQEMMDIKQFI 222          
The following BLAST results are available for this feature:
BLAST of CK935640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
APTH1_GIBZE1.020e-2330.33Acyl-protein thioesterase 1 OS=Gibberella zeae GN=... [more]
APTH1_USTMA3.874e-2333.49Acyl-protein thioesterase 1 OS=Ustilago maydis GN=... [more]
LYPA1_HUMAN1.127e-2235.29Acyl-protein thioesterase 1 OS=Homo sapiens GN=LYP... [more]
APTH1_DEBHA1.127e-2232.70Acyl-protein thioesterase 1 OS=Debaryomyces hansen... [more]
LYPA1_PONAB1.472e-2235.29Acyl-protein thioesterase 1 OS=Pongo abelii GN=LYP... [more]
LYPA1_RABIT3.280e-2234.80Acyl-protein thioesterase 1 OS=Oryctolagus cunicul... [more]
LYPA1_MOUSE3.280e-2234.80Acyl-protein thioesterase 1 OS=Mus musculus GN=Lyp... [more]
LYPA1_RAT7.307e-2234.80Acyl-protein thioesterase 1 OS=Rattus norvegicus G... [more]
APTH1_CANAL1.628e-2130.52Acyl-protein thioesterase 1 OS=Candida albicans GN... [more]
LYPA1_BOVIN4.736e-2134.31Acyl-protein thioesterase 1 OS=Bos taurus GN=LYPLA... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004553_D09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIF_D09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935640 ID=CK935640; Name=CK935640; organism=Citrus sinensis; type=EST; length=908bp
GCGGGAAGAATAAAAGAAACAAGACCAGANNNGCAGGGATGAATCGATGT
TATTGACGAAACCGATCGTTCTATTTACGGTGATTTTGAGCGGCACCATT
ATATTCATTCTATTTTTCTGGCCGAGTTCATCGTATTCACACGAACAAAA
TCCCATGGCTCGAAACTTTATATTGTGGCTCCATGGCTTGGGTGACTCCG
GTCCAGCCAATGAACCCATCAAAACTCTCTTCACTTCTCCTGAGTTTAAA
CTCACCAAATGGTCCTTCCCTTCTGCTCCTAACAACCCTGTTACTTGTAA
CTATGGTGCTGTGATGCCTTCATGGTTTGACATTCATGAGATTCCTGTGA
CTGCTAGTTCTCCGAAAGATGAATCTAGTTTGCTGAAAGCAGTTCGAAAT
GTGCATGCAATGATAGACAAGGAAGTAGCTGCTGGGATAGATCCTAATAA
TGTTTTCGTCTGTGGATTTAGTCAAGGAGGTGCCTTAACTTTGGCCAGTG
TTCTGTTATACCCAAGAAAACTTGGAGGAGGCGCAATTTTTAGTGGATGG
GTTCCTTTTAATGCTTCTCTGATTGATCAATTTACATCAGATGCAAAAAA
GACACCGATTTTGTGGTCTCATGGAATGGCTGACAGAACAGTATTGTTTG
AAGCTGGACAAGCAGGTCCACCTTTCCTTGAGCAAGCTGGCATAAGCTGT
GAGTTTAAGGCTTATCCTGGTCTTGGCCACTCTATAAGTAATGAGGGGCT
CCGGAACCTTGAATCATGGATCAAGACTCGTATGAGCTGTAGTTCTTCCT
AGCTGTTTTGAGTATTGTTGAAATTATGCCTGATCATTCTTTCAGCTACT
TGGAGGTGATCAGTTGATCATTGATTGGTGATACTGAATGGGATAAGCAA
AACGTGCT
back to top