CK935643
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935643 vs. ExPASy Swiss-Prot
Match: LOXX_SOYBN (Seed lipoxygenase OS=Glycine max GN=LOX1.4 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.187e-15 Identity = 47/121 (38.84%), Postives = 68/121 (56.20%), Query Frame = 2 Query: 2 SPGYEKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 364 +P Y++ + NPQ +L ++ + + ++V + LS H+ DE YLG+ +W D + L F +F + L IE IN RN D L+ R G PY LL SS G+T +GIPNSISI Sbjct: 746 TPEYDEMVKNPQKAYLRTITPKFETLIDLSVIEILSRHASDEIYLGERET--PNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRSSEEGLTFKGIPNSISI 864
BLAST of CK935643 vs. ExPASy Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.363e-15 Identity = 48/120 (40.00%), Postives = 64/120 (53.33%), Query Frame = 2 Query: 20 FLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGR-----GIPNSISI 364 F P+ +L +LP+QLQ VMA D LS+H+ DEEY+G W D EV F F + +I + + NKD + R GAG+ PY LL P +G + + GIPNSISI Sbjct: 815 FKAAPEKVWLDTLPSQLQTVMVMATLDLLSSHASDEEYMG--THQEPAWQRDGEVDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRPLNGNPMDAKTVMEMGIPNSISI 932
BLAST of CK935643 vs. ExPASy Swiss-Prot
Match: LOX2_ORYSJ (Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.085e-14 Identity = 47/124 (37.90%), Postives = 68/124 (54.84%), Query Frame = 2 Query: 11 YEKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSS------GPGVTGRGIPNSISI 364 Y++ +P+ F+ ++ Q+QA +++ + LS HS DE YLGQ + W +D + L F +F A L EIE + NKD K R G PY LL P++ G++ RGIPNSISI Sbjct: 749 YDELARDPEKVFVRTITKQMQAIVGISLLEILSKHSSDEVYLGQRDT--PEWTSDAKALEAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIPNSISI 870
BLAST of CK935643 vs. ExPASy Swiss-Prot
Match: LOX1_HORVU (Lipoxygenase 1 OS=Hordeum vulgare GN=LOX1.1 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.085e-14 Identity = 49/129 (37.98%), Postives = 72/129 (55.81%), Query Frame = 2 Query: 5 PGYEKFL---LNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPS------SGPGVTGRGIPNSISI 364 PG E++ +P+ F+ ++ +Q+Q +++ + LS HS DE YLGQ + W +DP+ L +F +FS L EIE + N D LK R G PY LL P+ + G+T +GIPNSISI Sbjct: 736 PGTEEYAELERDPERAFIHTITSQIQTIIGVSLLEVLSKHSSDELYLGQRDT--PEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 862
BLAST of CK935643 vs. ExPASy Swiss-Prot
Match: LOXA_PHAVU (Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOXA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.418e-14 Identity = 48/119 (40.34%), Postives = 71/119 (59.66%), Query Frame = 2 Query: 11 YEKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPS-SGPGVTGRGIPNSISI 364 Y + N Q +L ++ +++A ++V + LS H+ DE YLGQ + + +W N+ + L F +F L+EIE+ I RNKD L+ R G PY +LLP+ G+T RGIPNSISI Sbjct: 746 YGELTSNYQKAYLRTITGKVEAIVDLSVIEILSRHASDEVYLGQRD--NPNWTNNIKALQAFKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPTCEDEGLTFRGIPNSISI 862
BLAST of CK935643 vs. ExPASy Swiss-Prot
Match: LOX5_ARATH (Lipoxygenase 5, chloroplastic OS=Arabidopsis thaliana GN=LOX5 PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.158e-14 Identity = 48/112 (42.86%), Postives = 62/112 (55.36%), Query Frame = 2 Query: 44 FLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGP-----GVTGRGIPNSISI 364 FL ++ QLQ +++ + LS HS DE YLGQ + +W D E L F +F LE IE I RN D R K R G PY LL P++ G+TG+GIPNS+SI Sbjct: 777 FLKTITPQLQTLLGISIIEILSMHSTDEIYLGQRDS--PNWTADDEPLEAFKRFGKELELIENNIIRRNNDKRFKNRTGPVNIPYTLLYPNTTDYTREGGITGKGIPNSVSI 886
BLAST of CK935643 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.035e-14 Identity = 47/125 (37.60%), Postives = 65/125 (52.00%), Query Frame = 2 Query: 20 FLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTG----------RGIPNSISI 364 F+ P+ L + P+Q Q+ V+A+ D LSTHS DEEY+G + W D + F++F + +I + ++ N D K R GAG+ PY LL PS G G GIPNSISI Sbjct: 814 FVEAPEKVLLDTFPSQYQSAIVLAILDLLSTHSSDEEYMGTHEE--PAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEMGIPNSISI 936
BLAST of CK935643 vs. ExPASy Swiss-Prot
Match: LOX1_LENCU (Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.200e-13 Identity = 44/121 (36.36%), Postives = 63/121 (52.07%), Query Frame = 2 Query: 2 SPGYEKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 364 +P Y+ N + +L ++ + + + + LS H+ DE+YLG+ + W D F +F L EIE+ + RN D L+ R G PY LL PSS G+T RGIPNSISI Sbjct: 747 TPEYDDLAKNYEKAYLRTITPKNDTLTDLTIIEVLSRHASDEQYLGERIE-GDDWTTDSVPKEAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPSSEEGLTCRGIPNSISI 866
BLAST of CK935643 vs. ExPASy Swiss-Prot
Match: LOX3_ORYSJ (Putative lipoxygenase 3 OS=Oryza sativa subsp. japonica GN=Os03g0700400 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.778e-13 Identity = 46/118 (38.98%), Postives = 64/118 (54.24%), Query Frame = 2 Query: 29 NPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPS------SGPGVTGRGIPNSISI 364 +P+ F+ ++ +QLQ +++ + LS HS DE YLGQ + W +D L F +FS L EIE + N D LK R G PY LL P+ + G+T +GIPNSISI Sbjct: 751 DPERAFIRTITSQLQTIIGISLIEVLSKHSSDEVYLGQRDT--PAWTSDARALEAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIPNSISI 866
BLAST of CK935643 vs. ExPASy Swiss-Prot
Match: LOXB_PHAVU (Lipoxygenase (Fragment) OS=Phaseolus vulgaris PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.263e-12 Identity = 43/115 (37.39%), Postives = 59/115 (51.30%), Query Frame = 2 Query: 2 SPGYEKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGI 346 S Y NP+ FL ++ + + + V + LS H+ DE YLG+ + HW +D L F +F L EIEK + +N D L+ R G PY LL PSS G+T RGI Sbjct: 628 SAEYAALAKNPEKEFLKTITGKKETLIDLTVIEILSRHASDEIYLGERDG-GDHWTSDAGPLEAFKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLLYPSSEEGLTFRGI 741 The following BLAST results are available for this feature:
BLAST of CK935643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935643 ID=CK935643; Name=CK935643; organism=Citrus sinensis; type=EST; length=647bpback to top |