CK935645

Overview
NameCK935645
Unique NameCK935645
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1498 contig Csv1_Contig1498:56..735. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDK_GLOVI (Nucleoside diphosphate kinase OS=Gloeobacter violaceus GN=ndk PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.029e-41
Identity = 67/110 (60.91%), Postives = 81/110 (73.64%), Query Frame = 2
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            ME+TFI IKPDGVQRGLVGEI+ RFE++GF L GLKLM V    A+KHY +   +PFFG L+ +ITS PVVA++ EG+GVV T R ++G TNP  S  GTIRGD  I  G
Sbjct:    1 MERTFIAIKPDGVQRGLVGEILQRFERRGFKLVGLKLMQVSEALAQKHYAEHKERPFFGGLVAFITSSPVVAVVLEGKGVVATARAMMGVTNPLNSPLGTIRGDYGIDIG 110          

HSP 2 Score: 54.299 bits (129), Expect = 1.029e-41
Identity = 24/38 (63.16%), Postives = 31/38 (81.58%), Query Frame = 1
Query:  406 NIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 516
            NIIHGSDS+ESA++EIALWF P   + WQ++L  W+YE
Sbjct:  112 NIIHGSDSLESAEREIALWFAPAELLEWQATLGSWVYE 149          
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDKB_PIG (Nucleoside diphosphate kinase B OS=Sus scrofa GN=NME2 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.339e-41
Identity = 67/109 (61.47%), Postives = 80/109 (73.39%), Query Frame = 2
Query:   80 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            E+TFI +KPDGVQRGLVGEII RFE+KGF L  LK +       ++HY DL  +PFF  L++Y+ SGPVVAM+WEG  VVKTGR ++G TNPA S PGTIRGD  I  G
Sbjct:    5 ERTFIAVKPDGVQRGLVGEIIKRFEQKGFRLVALKFLQASEELLKQHYIDLKDRPFFPGLVKYMGSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVG 113          

HSP 2 Score: 50.0618 bits (118), Expect = 1.339e-41
Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 1
Query:  406 NIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 516
            NIIHGSDSV+SA+KEI+LWF P+  + ++S    WIYE
Sbjct:  115 NIIHGSDSVKSAEKEISLWFKPEELVEYKSCAFDWIYE 152          
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDK_SYNP2 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ndk PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.340e-41
Identity = 68/110 (61.82%), Postives = 85/110 (77.27%), Query Frame = 2
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            ME+TF+M+KPDGVQRGLVG++I RFE KGF L GLKL++V R  AE+HY     +PFFGSL+E+I S PVVAM+WEG+G +   R IIGATNP ++ PGTIRGD  +  G
Sbjct:    1 MERTFVMVKPDGVQRGLVGDVIRRFEAKGFKLVGLKLVSVSRELAEQHYGVHRERPFFGSLVEFIISVPVVAMVWEGKGAIAAARKIIGATNPLEAEPGTIRGDFGVDIG 110          

HSP 2 Score: 45.0542 bits (105), Expect = 1.340e-41
Identity = 18/38 (47.37%), Postives = 26/38 (68.42%), Query Frame = 1
Query:  406 NIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 516
            N+IHGSD  ++A  EIALWF +  + NW+ +   W+YE
Sbjct:  112 NLIHGSDGPDTAASEIALWFSESELANWEPATKAWLYE 149          
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDKA2_XENLA (Nucleoside diphosphate kinase A2 OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.745e-41
Identity = 65/109 (59.63%), Postives = 81/109 (74.31%), Query Frame = 2
Query:   80 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            E+TFI IKPDGVQRGL+G+II RFE+KGF L  +K +   +    +HY DL  +PF+  L+EY+ SGPV+AM+WEG  VVKTGR ++G TNPA S PGTIRGDL I  G
Sbjct:    6 ERTFIAIKPDGVQRGLMGDIIKRFEQKGFRLVAMKFLQASQDLLRQHYIDLKDRPFYPGLVEYMNSGPVLAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDLCIQVG 114          

HSP 2 Score: 50.8322 bits (120), Expect = 1.745e-41
Identity = 23/38 (60.53%), Postives = 29/38 (76.32%), Query Frame = 1
Query:  406 NIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 516
            NIIHGSDSV+SA KEIALWF D   + ++S  + W+YE
Sbjct:  116 NIIHGSDSVDSANKEIALWFKDEELVEYKSCAYEWVYE 153          
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDK_CARHZ (Nucleoside diphosphate kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=ndk PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 2.965e-41
Identity = 70/110 (63.64%), Postives = 84/110 (76.36%), Query Frame = 2
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            ME+TFIM+KPDGVQRGLVGEII RFEK+GF L GLKLM + R  AE HY +   KPFF  L+ +ITSGPVVAM+WEG+ V+ T R ++GATNP ++ PGTIRG   I  G
Sbjct:    1 MERTFIMVKPDGVQRGLVGEIISRFEKRGFKLVGLKLMQISRELAETHYGEHKGKPFFEGLLNFITSGPVVAMVWEGKEVIATAREMMGATNPLKAQPGTIRGTYGIDVG 110          

HSP 2 Score: 43.1282 bits (100), Expect = 2.965e-41
Identity = 20/38 (52.63%), Postives = 29/38 (76.32%), Query Frame = 1
Query:  406 NIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 516
            N+IHGSDS ESA +EIAL+F +   ++++ +L  WIYE
Sbjct:  112 NVIHGSDSPESAAREIALFFKEEELLSYEKTLDTWIYE 149          
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDK_GINCI (Nucleoside diphosphate kinase (Fragment) OS=Ginglymostoma cirratum PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 3.864e-41
Identity = 66/109 (60.55%), Postives = 82/109 (75.23%), Query Frame = 2
Query:   80 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            E+TFI +KPDGVQR +VGE+I RFE+KGF L  +K +   +   EKHY +LS KPF+  LI+Y++SGPVVAM+WEG  VVKTGR ++G TNPA S PGTIRGD  I  G
Sbjct:    4 ERTFIAVKPDGVQRCIVGEVIKRFEQKGFKLVAMKFLQAPKDLLEKHYCELSDKPFYPKLIKYMSSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVG 112          

HSP 2 Score: 48.9062 bits (115), Expect = 3.864e-41
Identity = 23/38 (60.53%), Postives = 29/38 (76.32%), Query Frame = 1
Query:  406 NIIHGSDSVESAQKEIALWFP-DGPINWQSSLHPWIYE 516
            NIIHGSDSVESA+KEI+LWF  +  + +Q+    WIYE
Sbjct:  114 NIIHGSDSVESAKKEISLWFKREELVEYQNCAQDWIYE 151          
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDK_SYNP6 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ndk PE=3 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 5.035e-41
Identity = 67/110 (60.91%), Postives = 80/110 (72.73%), Query Frame = 2
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            ME+TFI IKPDGVQRGLVG II RFE+KGF L GLK +   R  AE+HY     +PFF  L+E+ITSGP+VA++ EGEGVV   R +IGATNP  + PGTIRGD  +  G
Sbjct:    1 MERTFIAIKPDGVQRGLVGTIIGRFEQKGFKLVGLKQLKPSRELAEQHYAVHRERPFFNGLVEFITSGPIVAIVLEGEGVVAAARKLIGATNPLTAEPGTIRGDFGVNIG 110          

HSP 2 Score: 53.1434 bits (126), Expect = 5.035e-41
Identity = 24/45 (53.33%), Postives = 33/45 (73.33%), Query Frame = 1
Query:  388 FGYRDG-NIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 516
            FG   G NIIHGSD++E+AQ+EIALWF    + +W  ++ PW+YE
Sbjct:  105 FGVNIGRNIIHGSDAIETAQQEIALWFSPAELSDWTPTIQPWLYE 149          
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDK_SYNE7 (Nucleoside diphosphate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=ndk PE=3 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 5.035e-41
Identity = 67/110 (60.91%), Postives = 80/110 (72.73%), Query Frame = 2
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            ME+TFI IKPDGVQRGLVG II RFE+KGF L GLK +   R  AE+HY     +PFF  L+E+ITSGP+VA++ EGEGVV   R +IGATNP  + PGTIRGD  +  G
Sbjct:    1 MERTFIAIKPDGVQRGLVGTIIGRFEQKGFKLVGLKQLKPSRELAEQHYAVHRERPFFNGLVEFITSGPIVAIVLEGEGVVAAARKLIGATNPLTAEPGTIRGDFGVNIG 110          

HSP 2 Score: 53.1434 bits (126), Expect = 5.035e-41
Identity = 24/45 (53.33%), Postives = 33/45 (73.33%), Query Frame = 1
Query:  388 FGYRDG-NIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 516
            FG   G NIIHGSD++E+AQ+EIALWF    + +W  ++ PW+YE
Sbjct:  105 FGVNIGRNIIHGSDAIETAQQEIALWFSPAELSDWTPTIQPWLYE 149          
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDK_BACSK (Nucleoside diphosphate kinase OS=Bacillus clausii (strain KSM-K16) GN=ndk PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.039e-41
Identity = 65/111 (58.56%), Postives = 89/111 (80.18%), Query Frame = 2
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGI 409
            ME+T++M+KPDGVQR L+G I+ RFE+KG++L   KL+T+ +  AE HY +   +PFFG L+ +ITSGPV AM+WEGEGV+K  R +IGATNP+++APGTIRGDLA+  G+
Sbjct:    1 MERTYVMVKPDGVQRNLIGNIVSRFEQKGYTLAAAKLVTLSKETAETHYSEHRERPFFGELVSFITSGPVFAMVWEGEGVIKAARQLIGATNPSEAAPGTIRGDLAVNVGM 111          

HSP 2 Score: 39.2762 bits (90), Expect = 5.039e-41
Identity = 16/36 (44.44%), Postives = 27/36 (75.00%), Query Frame = 1
Query:  406 NIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWI 510
            N++HGSDS ESA++EIA++F +  +N +Q   + W+
Sbjct:  112 NVVHGSDSPESAEREIAIFFKEEELNDYQKDSNKWV 147          
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDKB_BOVIN (Nucleoside diphosphate kinase B OS=Bos taurus GN=NME2 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 6.555e-41
Identity = 67/109 (61.47%), Postives = 80/109 (73.39%), Query Frame = 2
Query:   80 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            E+TFI IKPDGVQRGLVGEII RFE+KGF L  +K +       ++HY DL  +PFF  L++Y+ SGPVVAM+WEG  VVKTGR ++G TNPA S PGTIRGD  I  G
Sbjct:    5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLQASEELLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVG 113          

HSP 2 Score: 47.3654 bits (111), Expect = 6.555e-41
Identity = 23/38 (60.53%), Postives = 28/38 (73.68%), Query Frame = 1
Query:  406 NIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 516
            NIIHGSDSV+SA+KEI LWF P+  I ++     WIYE
Sbjct:  115 NIIHGSDSVKSAEKEINLWFKPEELIEYKPCAFDWIYE 152          
The following BLAST results are available for this feature:
BLAST of CK935645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_GLOVI1.029e-4160.91Nucleoside diphosphate kinase OS=Gloeobacter viola... [more]
NDKB_PIG1.339e-4161.47Nucleoside diphosphate kinase B OS=Sus scrofa GN=N... [more]
NDK_SYNP21.340e-4161.82Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDKA2_XENLA1.745e-4159.63Nucleoside diphosphate kinase A2 OS=Xenopus laevis... [more]
NDK_CARHZ2.965e-4163.64Nucleoside diphosphate kinase OS=Carboxydothermus ... [more]
NDK_GINCI3.864e-4160.55Nucleoside diphosphate kinase (Fragment) OS=Gingly... [more]
NDK_SYNP65.035e-4160.91Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_SYNE75.035e-4160.91Nucleoside diphosphate kinase OS=Synechococcus elo... [more]
NDK_BACSK5.039e-4158.56Nucleoside diphosphate kinase OS=Bacillus clausii ... [more]
NDKB_BOVIN6.555e-4161.47Nucleoside diphosphate kinase B OS=Bos taurus GN=N... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004553_C05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIF_C05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935645 ID=CK935645; Name=CK935645; organism=Citrus sinensis; type=EST; length=677bp
GGGGATTCTCTCGCATGTGTGCTGTGCTATTTCACTCAATTCTCAAAACA
AGTTGGTTTCTCTGAATCTCAAAGAAATGGAACAAACTTTCATCATGATC
AAGCCCGATGGGGTCCAAAGAGGCCTTGTTGGTGAAATCATCATCAGATT
TGAGAAGAAGGGTTTCTCTTTGAAGGGTTTGAAGCTTATGACTGTGGACC
GCCCTTTTGCTGAGAAGCACTATGAGGATTTGTCATCGAAGCCTTTCTTT
GGTTCTCTGATTGAGTACATTACCTCTGGTCCTGTTGTTGCTATGATTTG
GGAGGGTGAAGGCGTTGTTAAGACTGGCCGCACTATTATTGGAGCCACCA
ACCCTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCTATCGTG
ACGGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGCCCAGAAAGAA
ATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGAGCAGCCTTCA
CCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGCCTAATTGTTC
CTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTTATTTATGGTT
ACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAATTGAGACCGAA
AAAAAAAAAAAAAAAAAAAAAAAAAAA
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