CK935645

Overview
NameCK935645
Unique NameCK935645
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1498 contig Csv1_Contig1498:56..735. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDK_SYNS3 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9311) GN=ndk PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 4.524e-39
Identity = 69/109 (63.30%), Postives = 86/109 (78.90%), Query Frame = 2
Query:   80 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            E++FI IKPDGVQRGLVGEI+ RFE+KGF L GLK +T  R  AE+HY     +PFFG L+++ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDLAI  G
Sbjct:    4 ERSFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLTPSRELAEQHYGVHKERPFFGGLVDFITSGPVVAMVWEGDGVITSARKMIGATKPLEAEPGTIRGDLAINIG 112          

HSP 2 Score: 36.965 bits (84), Expect = 4.524e-39
Identity = 18/38 (47.37%), Postives = 23/38 (60.53%), Query Frame = 1
Query:  406 NIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 516
            N+IHGSD+ E+A+ EI LWF P    +W  S   W  E
Sbjct:  114 NVIHGSDAPETAEFEIGLWFNPSELSDWTPSDQTWRVE 151          
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDK_SYNPX (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain WH8102) GN=ndk PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.527e-39
Identity = 68/109 (62.39%), Postives = 85/109 (77.98%), Query Frame = 2
Query:   80 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            E+TFI IKPDGVQRGLVGEI+ RFE+KGF L GLK +T  R  AE+HY     +PFF  L+++ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDLA+  G
Sbjct:    3 ERTFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIG 111          

HSP 2 Score: 38.1206 bits (87), Expect = 4.527e-39
Identity = 18/38 (47.37%), Postives = 23/38 (60.53%), Query Frame = 1
Query:  406 NIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 516
            N+IHGSD+ E+A+ EI LWF    +N W  S   W  E
Sbjct:  113 NVIHGSDAPETAEFEIGLWFDAAELNDWTPSDQTWRVE 150          
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDK_SYNS9 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9902) GN=ndk PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.527e-39
Identity = 68/109 (62.39%), Postives = 84/109 (77.06%), Query Frame = 2
Query:   80 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            E+TF+ IKPDGVQRGLVGEI+ RFE+KGF L GLK +T  R  AE+HY     +PFF  L+ +ITSGPVVAM+WEG+GV+ + R +IGAT P +S PGTIRGDLA+  G
Sbjct:    3 ERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEEHYGVHKERPFFAGLVGFITSGPVVAMVWEGDGVIASARKLIGATKPLESEPGTIRGDLAVNIG 111          

HSP 2 Score: 38.891 bits (89), Expect = 4.527e-39
Identity = 18/38 (47.37%), Postives = 23/38 (60.53%), Query Frame = 1
Query:  406 NIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 516
            N+IHGSD+ E+A+ EI LWF    +N W  S   W  E
Sbjct:  113 NVIHGSDAPETAEFEIGLWFQPSELNDWSPSDQAWRVE 150          
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDK_OCEIH (Nucleoside diphosphate kinase OS=Oceanobacillus iheyensis GN=ndk PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.692e-39
Identity = 63/110 (57.27%), Postives = 80/110 (72.73%), Query Frame = 2
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            ME+TF+M+KPDGVQR L+GEI+ RFE KG+ L G KLM V    AE HY +   +PFFG L+++ITSGPV AM+WEGE V+ T R ++G TNP ++ P TIRGD  I  G
Sbjct:    1 MEKTFLMVKPDGVQRELIGEIVKRFETKGYKLAGAKLMQVSNQLAETHYSEHKERPFFGELVDFITSGPVFAMVWEGENVIATARKMMGKTNPLEADPSTIRGDFGISVG 110          

HSP 2 Score: 41.9726 bits (97), Expect = 7.692e-39
Identity = 22/44 (50.00%), Postives = 30/44 (68.18%), Query Frame = 1
Query:  388 FGYRDG-NIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIY 513
            FG   G NIIHGSDS ESA++EI L+F +  I +++   + WIY
Sbjct:  105 FGISVGKNIIHGSDSAESAEREITLFFTENEIVSYEKQANNWIY 148          
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDK_SYNPW (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain WH7803) GN=ndk PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.000e-38
Identity = 68/109 (62.39%), Postives = 85/109 (77.98%), Query Frame = 2
Query:   80 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            E+TFI IKPDGVQRGL+GEI+ RFE+KGF L GLK +T  R  AE+HY     +PFF  L+++ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDLAI  G
Sbjct:    4 ERTFIAIKPDGVQRGLIGEILGRFERKGFKLVGLKQLTPSRELAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAINIG 112          

HSP 2 Score: 36.5798 bits (83), Expect = 1.000e-38
Identity = 17/35 (48.57%), Postives = 22/35 (62.86%), Query Frame = 1
Query:  406 NIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 507
            N+IHGSD+ E+AQ EI LWF    + +W  S   W
Sbjct:  114 NVIHGSDAPETAQFEIGLWFQASELSDWTPSDQGW 148          
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDK_YEAST (Nucleoside diphosphate kinase OS=Saccharomyces cerevisiae GN=YNK1 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.698e-38
Identity = 61/111 (54.95%), Postives = 81/111 (72.97%), Query Frame = 2
Query:   74 EMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            + E+TFI +KPDGVQRGLV +I+ RFEKKG+ L  +KL+  D    E+HY +   KPFF  ++ ++ SGP++A +WEG+ VV+ GRTI+GATNP  SAPGTIRGD  I  G
Sbjct:    4 QTERTFIAVKPDGVQRGLVSQILSRFEKKGYKLVAIKLVKADDKLLEQHYAEHVGKPFFPKMVSFMKSGPILATVWEGKDVVRQGRTILGATNPLGSAPGTIRGDFGIDLG 114          

HSP 2 Score: 46.9802 bits (110), Expect = 1.698e-38
Identity = 20/38 (52.63%), Postives = 29/38 (76.32%), Query Frame = 1
Query:  406 NIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 516
            N+ HGSDSV+SA++EI LWF  +  ++W+S+   WIYE
Sbjct:  116 NVCHGSDSVDSAEREINLWFKKEELVDWESNQAKWIYE 153          
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDK_STAHJ (Nucleoside diphosphate kinase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=ndk PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.214e-38
Identity = 64/110 (58.18%), Postives = 80/110 (72.73%), Query Frame = 2
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            ME+TF+MIKPD +QR LVGEII R E+KG  L G KLMTV +  AE+HY + + KPF+G LI +ITS PV AM+ EGE  V   R IIG TNP+++ PG+IRGDL +  G
Sbjct:    1 MERTFLMIKPDAIQRNLVGEIISRIERKGLKLVGAKLMTVPQALAEEHYSEHTDKPFYGKLISFITSAPVFAMVVEGEDAVDVSRHIIGKTNPSEATPGSIRGDLGLTVG 110          

HSP 2 Score: 45.8246 bits (107), Expect = 2.214e-38
Identity = 20/38 (52.63%), Postives = 29/38 (76.32%), Query Frame = 1
Query:  406 NIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 516
            N+IHGSDSVESAQ+EI LWF +  + ++++    W+YE
Sbjct:  112 NVIHGSDSVESAQREINLWFKEEELSSYEAPRDTWLYE 149          
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDK_DESRM (Nucleoside diphosphate kinase OS=Desulfotomaculum reducens (strain MI-1) GN=ndk PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 2.885e-38
Identity = 61/110 (55.45%), Postives = 86/110 (78.18%), Query Frame = 2
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            ME+T++M+KPDGVQRGL+G+II +FE+KG+ + GLK+M + R  AE+HY + + KPFF  L+++ITSGPVVAM+ EG+ VV T R ++GATNP ++APGTIR    +  G
Sbjct:    1 MERTYLMVKPDGVQRGLIGQIISKFEQKGYKIVGLKMMQISREVAERHYGEHAGKPFFNGLVDFITSGPVVAMVIEGKDVVTTAREMMGATNPLKAAPGTIRATFGVDVG 110          

HSP 2 Score: 42.743 bits (99), Expect = 2.885e-38
Identity = 20/38 (52.63%), Postives = 29/38 (76.32%), Query Frame = 1
Query:  406 NIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 516
            NIIHGSDS+ESAQ+EI ++F  +  I++  ++  WIYE
Sbjct:  112 NIIHGSDSLESAQREIGIFFKSEELIDYDRAIDTWIYE 149          
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDK_ASHGO (Nucleoside diphosphate kinase OS=Ashbya gossypii GN=NDK1 PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.885e-38
Identity = 61/109 (55.96%), Postives = 81/109 (74.31%), Query Frame = 2
Query:   80 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            E+TFI IKPDGVQRGL+ +I+ RFE +G+ L G+KL+T      ++HY +   KPFF  ++ Y+TSGP++A +WEG+ VVK GR I+GATNP  SAPGTIRGD A+  G
Sbjct:    4 ERTFIAIKPDGVQRGLISKILSRFESRGYKLVGIKLVTPTENLLKQHYAEHVEKPFFPKMLAYMTSGPILATVWEGKDVVKQGRVILGATNPLNSAPGTIRGDFALDMG 112          

HSP 2 Score: 46.2098 bits (108), Expect = 2.885e-38
Identity = 21/38 (55.26%), Postives = 28/38 (73.68%), Query Frame = 1
Query:  406 NIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 516
            N+ HGSDSVESAQ+EI LWF  +  ++W+ +   WIYE
Sbjct:  114 NVCHGSDSVESAQREIDLWFKKEELVDWKLNQLSWIYE 151          
BLAST of CK935645 vs. ExPASy Swiss-Prot
Match: NDKM_DICDI (Nucleoside diphosphate kinase, mitochondrial OS=Dictyostelium discoideum GN=ndkM PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 8.225e-38
Identity = 72/132 (54.55%), Postives = 90/132 (68.18%), Query Frame = 2
Query:   11 SHVCCAISLNSQNKLVSLNLKEMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 406
            S V C    N    LV L     E++FI IK    QR L+GEII RFEKKGF L G+K++      A KHYEDL+ KPFF  L+++ +SG VVAM++EG+ VV+TGR +IGAT+P+QSAPGTIR DL I TG
Sbjct:   53 SFVACE---NKSVPLVGLPGTNQERSFIAIKVSSTQRRLIGEIIARFEKKGFKLVGIKILVPTPEHAAKHYEDLNKKPFFNGLVKFFSSGAVVAMVFEGKDVVRTGRVLIGATDPSQSAPGTIRFDLCIETG 181          

HSP 2 Score: 41.2022 bits (95), Expect = 8.225e-38
Identity = 21/31 (67.74%), Postives = 23/31 (74.19%), Query Frame = 1
Query:  406 NIIHGSDSVESAQKEIALWFPDGPI-NWQSS 495
            NIIHGSDS ESA  EIALWF +  I NW S+
Sbjct:  183 NIIHGSDSNESAAHEIALWFKEDEIANWVST 213          
The following BLAST results are available for this feature:
BLAST of CK935645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_SYNS34.524e-3963.30Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_SYNPX4.527e-3962.39Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_SYNS94.527e-3962.39Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_OCEIH7.692e-3957.27Nucleoside diphosphate kinase OS=Oceanobacillus ih... [more]
NDK_SYNPW1.000e-3862.39Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_YEAST1.698e-3854.95Nucleoside diphosphate kinase OS=Saccharomyces cer... [more]
NDK_STAHJ2.214e-3858.18Nucleoside diphosphate kinase OS=Staphylococcus ha... [more]
NDK_DESRM2.885e-3855.45Nucleoside diphosphate kinase OS=Desulfotomaculum ... [more]
NDK_ASHGO2.885e-3855.96Nucleoside diphosphate kinase OS=Ashbya gossypii G... [more]
NDKM_DICDI8.225e-3854.55Nucleoside diphosphate kinase, mitochondrial OS=Di... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004553_C05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIF_C05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935645 ID=CK935645; Name=CK935645; organism=Citrus sinensis; type=EST; length=677bp
GGGGATTCTCTCGCATGTGTGCTGTGCTATTTCACTCAATTCTCAAAACA
AGTTGGTTTCTCTGAATCTCAAAGAAATGGAACAAACTTTCATCATGATC
AAGCCCGATGGGGTCCAAAGAGGCCTTGTTGGTGAAATCATCATCAGATT
TGAGAAGAAGGGTTTCTCTTTGAAGGGTTTGAAGCTTATGACTGTGGACC
GCCCTTTTGCTGAGAAGCACTATGAGGATTTGTCATCGAAGCCTTTCTTT
GGTTCTCTGATTGAGTACATTACCTCTGGTCCTGTTGTTGCTATGATTTG
GGAGGGTGAAGGCGTTGTTAAGACTGGCCGCACTATTATTGGAGCCACCA
ACCCTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCTATCGTG
ACGGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGCCCAGAAAGAA
ATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGAGCAGCCTTCA
CCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGCCTAATTGTTC
CTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTTATTTATGGTT
ACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAATTGAGACCGAA
AAAAAAAAAAAAAAAAAAAAAAAAAAA
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