CK935649

Overview
NameCK935649
Unique NameCK935649
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9923 contig Csv1_Contig9923:54..837. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935649 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.406e-28
Identity = 78/222 (35.14%), Postives = 117/222 (52.70%), Query Frame = 3
Query:   90 MELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAENLQRILRLLTSYGVF----SEHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIP 743
            ++L +   +PM L  AI L + + + + G    L  S I + +          L RILRLL SY +      +  +   ER Y L  + K L  + +G+S +P  L +    LM +W  + +A+L+  I PF K +G  A+ Y+G  P  N +  K MS  S   M  +L+ Y GF+G+  LVDVGG  G  +  I+ K+P I +GINFDLP V+A+AP+ P
Sbjct:   23 LQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPNAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGI-PFNKAYGMTAFEYHGTDPRFNKVFNKGMSVHSKMAMKKILETYKGFEGLASLVDVGGGTGAVVSTIVSKYPSI-KGINFDLPHVIADAPAFP 242          
BLAST of CK935649 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.406e-28
Identity = 80/222 (36.04%), Postives = 120/222 (54.05%), Query Frame = 3
Query:   81 LAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAE-NLQRILRLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEA 731
            L  M+LA+   +PM L  AI L + + I + G +  +S+S+++ ++      +A   + RI  LL SY V +    E  +   ER Y L  + K L+ +  G+S AP +L +    LM +W  + + VLD  I PF K +G  A+ Y+GK    N +    M   S   M  +++ Y+GF G+K LVDVGG  G  L MI  KH  + +GINFDLP V+A+A
Sbjct:   11 LFAMQLASASVLPMVLKTAIELDLLETIAKAGPHGSVSSSELVAQLPKVNNPEAPVMIDRICSLLASYSVLTCTLKETADGCAERFYGLAPVCKFLIKNDAGVSLAPLLLMNQDKVLMESWYYLKDPVLDGGI-PFNKAYGMSAFEYHGKDQRFNKVFNSGMFNHSTMTMKKIVELYNGFSGLKTLVDVGGGTGASLNMITSKHKSL-KGINFDLPHVIADA 230          
BLAST of CK935649 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.132e-28
Identity = 86/223 (38.57%), Postives = 120/223 (53.81%), Query Frame = 3
Query:   81 LAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAENL-QRILRLLTSYGVFS-EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIP 743
            L  M+LA    +PM L +AI L + + I   G +T +S ++I +  LP+   DA  +  RILRLL+ Y V +   R    +R Y L  + K L  + +G+S A   L +    LM +W  + +AVLD  I PF K +G  ++ Y+G  P  N +  + MS  S   M  V   Y GF+G+  LVDVGG  G  L MIL K+P I   INFDLP V+ +AP  P
Sbjct:    2 LFAMQLACASVLPMVLKSAIELDLLEII--RGQDTCMSPTEIASH-LPTTNPDAPAMVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGI-PFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQTYQGFQGLTSLVDVGGGTGATLTMILSKYPTI-RCINFDLPHVIEDAPEYP 219          
BLAST of CK935649 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.030e-27
Identity = 89/243 (36.63%), Postives = 126/243 (51.85%), Query Frame = 3
Query:   42 EDNECRDGGKKVRLAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTP----LSASQILTRILPSGG-GDAEN-LQRILRLLTSYGVFSEH----REFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSI 740
            ED+ C        L+ M L   +  P  L AAI L++ + I +    TP    +S S+I +++  S    D  N L R+LRLL SY V +       + G ER Y L+ +GK LV D      A +       AL+  W    EAV+D  I+ F  VHG   Y + GK  +MN +  K+M  V    M  +L+ Y GF+G+  LVDVGG +G  L +I+ K+P I +GINFDLP+V+  AP +
Sbjct:   21 EDSAC--------LSAMVLTTNLVYPAVLNAAIDLNLFEIIAKA---TPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLI-KGINFDLPQVIENAPPL 251          
BLAST of CK935649 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 4.432e-27
Identity = 74/219 (33.79%), Postives = 116/219 (52.97%), Query Frame = 3
Query:   96 LANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAENLQRILRLLTSYGVFS---EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIP 743
            LAN  + PM L +A  L + D   + G    +S S+I ++I          L R+LRLL S+ V +   +  E G +R Y    +   L ++    S  P ++ HH   +M +W  +++ +L+  + PF + HG   + Y G     N +  + M+  ++  M  +LD Y+GF  VK LVDVGG+ G  + MI+ KH  I +GIN+DLP V+A+APS P
Sbjct:   28 LANAAAFPMILKSAFELKILDIFSKAGEGVFVSTSEIASQIGAKNPNAPVLLDRMLRLLASHSVLTCKLQKGEGGSQRVYGPAPLCNYLASNDGQGSLGPLLVLHHDKVMMESWFHLNDYILEGGV-PFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLLDNYNGFNDVKVLVDVGGNIGVNVSMIVAKHTHI-KGINYDLPHVIADAPSYP 244          

HSP 2 Score: 21.9422 bits (45), Expect = 4.432e-27
Identity = 6/11 (54.55%), Postives = 8/11 (72.73%), Query Frame = 1
Query:  745 WVLTTWTDDEC 777
            WVL  W+D+ C
Sbjct:  267 WVLHDWSDEHC 277          
BLAST of CK935649 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.806e-26
Identity = 78/229 (34.06%), Postives = 115/229 (50.22%), Query Frame = 3
Query:   90 MELANMISVPMSLTAAIRLHVPD-----AIWQGGANTPLSASQILTRILPSGGGDA--ENLQRILRLLTSYGVFSEHREFGGE----RKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIP 743
            ++LA+   +PM+L  AI L + +     A+  GG    L     +   LPS    A  + + R+LRLL SY V     E G +    R+Y+   + K L  + +G+S A   L +    LM +W  + +AVLD  I PF K +G  A+ Y+G     N +  + M   SV     +LD Y GF     +VDVGG  G  +  ++ +HP I  GIN+DLP V++EAP  P
Sbjct:   21 LQLASSSILPMTLKNAIELGLLETLQSAAVAGGGGKAALLTPAEVADKLPSKANPAAADMVDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGI-PFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLYTGFDAASTVVDVGGGVGATVAAVVSRHPHI-RGINYDLPHVISEAPPFP 247          

HSP 2 Score: 21.557 bits (44), Expect = 2.806e-26
Identity = 5/11 (45.45%), Postives = 8/11 (72.73%), Query Frame = 1
Query:  745 WVLTTWTDDEC 777
            W+L  W+D+ C
Sbjct:  271 WILHDWSDEHC 281          
BLAST of CK935649 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 6.530e-26
Identity = 79/228 (34.65%), Postives = 121/228 (53.07%), Query Frame = 3
Query:   69 KKVRLAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAE-NLQRILRLLTSYGVFSEH-REFGG---ERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPS 737
            ++  L  M+LA+   +PM+L AAI L V + + +    +   +   +   LP+   +A   L R+LRLL SY V +   RE      ER Y L  + K L  + +G+S AP++L      L+  W  + +A+L+  I PF K +G   + Y+G     N +  K MS  S   M  +L+ Y+GF+G+  +VDVGG  G    MI+ K+P I   INFDLP V+ +AP+
Sbjct:   19 EEANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLTATDKVLLEPWFYLKDAILEGGI-PFNKAYGMNEFDYHGTDHRFNKVFNKGMSSNSTITMKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSI-NAINFDLPHVIQDAPA 244          
BLAST of CK935649 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.734e-14
Identity = 60/207 (28.99%), Postives = 99/207 (47.83%), Query Frame = 3
Query:  126 LTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAENLQRILRLLTSYGVFSEHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDG-YDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIP 743
            L  A+ L + D I     N P++ + + ++ LP    + +NL RILR L    +    +   G++KY+L  I   L  +A+  S  P +L   Q   M+ W  + + + D     F K  G   + Y    P+ + L  + M+G +    +S++ G  D F+G+  LVDVGG  G  ++ I    P I +   FDLP V+A +  +P
Sbjct:   31 LRCAVELGIVDII--DNNNQPMALADLASK-LPVSDVNCDNLYRILRYLVKMEILRVEKSDDGQKKYALEPIATLLSRNAK-RSMVPMILGMTQKDFMTPWHSMKDGLSD-NGTAFEKAMGMTIWEYLEGHPDQSQLFNEGMAGETRLLTSSLISGSRDMFQGIDSLVDVGGGNGTTVKAISDAFPHI-KCTLFDLPHVIANSYDLP 231          
BLAST of CK935649 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.663e-11
Identity = 57/204 (27.94%), Postives = 94/204 (46.08%), Query Frame = 3
Query:  126 LTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAENLQRILRLLTSYGVFSEHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDG-FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAP 734
            L  A++L + + I   G +  LS    L+  LPS   + + L R++R L    +F++     GE +Y L    K LV   +       +    +D  M+ W  + + +   +   F K  G   + Y  + PE N L  +AM+  S   M++++      F G+  LVDVGG  G  +R I    P I +   +DLP V+A++P
Sbjct:   27 LKCAVQLDLANIIHNSGTSMTLSE---LSSRLPSQPVNEDALYRVMRYLVHMKLFTK-ASIDGELRYGLAPPAKYLVKGWDKCMVGSILAITDKD-FMAPWHYLKDGLSGESGTAFEKALGTNIWGYMAEHPEKNQLFNEAMANDSRLIMSALVKECGNIFNGITTLVDVGGGTGTAVRNIANAFPHI-KCTVYDLPHVIADSP 224          
The following BLAST results are available for this feature:
BLAST of CK935649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
COMT2_POPTM1.406e-2835.14Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_ZINEL1.406e-2836.04Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
OMT2_CHRAE3.132e-2838.57Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
CHOMT_MEDSA2.030e-2736.63Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
IMT1_MESCR4.432e-2733.79Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
OMT1_ORYSJ2.806e-2634.06Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
IEMT_CLABR6.530e-2634.65(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
4OMT_COPJA5.734e-1428.993'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]
6OMT_COPJA2.663e-1127.94(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004553_C09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935649 ID=CK935649; Name=CK935649; organism=Citrus sinensis; type=EST; length=783bp
GGGGATGGTGCTGCGAAATCAAAGGTCAGTAAGCAGTAATGGAAGATAAC
GAGTGCAGAGATGGCGGGAAGAAGGTAAGACTGGCCATAATGGAGCTGGC
CAACATGATAAGTGTTCCCATGTCTCTAACCGCTGCCATCCGTCTCCACG
TACCGGATGCCATCTGGCAAGGTGGGGCCAATACCCCTCTCTCCGCCTCC
CAGATCTTGACACGTATCCTCCCATCCGGCGGTGGGGACGCCGAGAACTT
GCAACGTATCCTCCGCTTGCTCACCAGCTACGGCGTGTTCTCGGAGCATC
GCGAGTTTGGAGGCGAAAGGAAGTACAGCCTCACCGAGATCGGGAAATCC
CTCGTTACTGATGCCGAGGGTCTATCGTACGCGCCCTACGTGCTCCAGCA
TCACCAGGACGCGCTTATGAGCGCGTGGCCTTTGGTGCACGAGGCCGTTC
TGGACCCAACTATTGAGCCATTTGTGAAAGTCCATGGCGAGCCGGCATAT
AGTTATTATGGGAAGAAGCCTGAAATGAACGGCTTGATGCGAAAAGCCAT
GTCGGGAGTGTCCGTGCCGTTCATGACGTCCGTTTTGGACGGTTACGATG
GGTTCAAAGGTGTGAAGCGATTGGTTGATGTGGGTGGGAGTGCAGGTGAT
TGCCTGAGGATGATATTACAGAAACATCCTTTTATATGTGAAGGGATCAA
TTTTGATTTGCCTGAGGTTGTTGCCGAAGCTCCAAGTATCCCTGTGGGTT
TTAACTACATGGACTGACGATGAATGCAAGCTG
back to top