CK935651

Overview
NameCK935651
Unique NameCK935651
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length750
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935651 vs. ExPASy Swiss-Prot
Match: ASK15_ARATH (SKP1-like protein 15 OS=Arabidopsis thaliana GN=ASK15 PE=2 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 3.016e-41
Identity = 91/166 (54.82%), Postives = 112/166 (67.47%), Query Frame = 3
Query:   45 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRA----ASGVDDDLK----AWDTDFVK-VDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFT-PXXXXXXXXXNQWAFE 512
            +S KI L SSDGE+F+V+E VA + Q +KH++EDDC  N IPL NVT  ILS V+EYCKKHV+    DD +        DD+ K    AWD +F+K +D  T+F LILAANYLN++ LL LTCQTVAD IK KTPEE+R+ FNI+NDFT           N WAFE
Sbjct:    2 SSNKIVLTSSDGESFQVEEVVARKLQIVKHLLEDDCVINEIPLQNVTGNILSIVLEYCKKHVDDVVDDDASEEPKKKKPDDEAKQNLDAWDAEFMKNIDMETIFKLILAANYLNVEGLLGLTCQTVADYIKDKTPEEVRELFNIENDFTHEEEEEAIRKENAWAFE 167          
BLAST of CK935651 vs. ExPASy Swiss-Prot
Match: SKP1_XENLA (S-phase kinase-associated protein 1 OS=Xenopus laevis GN=skp1 PE=1 SV=3)

HSP 1 Score: 167.548 bits (423), Expect = 6.719e-41
Identity = 89/159 (55.97%), Postives = 108/159 (67.92%), Query Frame = 3
Query:   57 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCKKHVE--ASKSDDRAASGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 512
            I L+SSDGE FEVD  +A +S TIK M+ED     +  D+ +PLPNV + IL KVI++C  H +      DD       DD+  WD +F+KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT          NQW  E
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162          
BLAST of CK935651 vs. ExPASy Swiss-Prot
Match: SKP1_RAT (S-phase kinase-associated protein 1 OS=Rattus norvegicus GN=Skp1 PE=2 SV=3)

HSP 1 Score: 167.548 bits (423), Expect = 6.719e-41
Identity = 89/159 (55.97%), Postives = 108/159 (67.92%), Query Frame = 3
Query:   57 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCKKHVE--ASKSDDRAASGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 512
            I L+SSDGE FEVD  +A +S TIK M+ED     +  D+ +PLPNV + IL KVI++C  H +      DD       DD+  WD +F+KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT          NQW  E
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162          
BLAST of CK935651 vs. ExPASy Swiss-Prot
Match: SKP1_PONAB (S-phase kinase-associated protein 1 OS=Pongo abelii GN=SKP1 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.719e-41
Identity = 89/159 (55.97%), Postives = 108/159 (67.92%), Query Frame = 3
Query:   57 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCKKHVE--ASKSDDRAASGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 512
            I L+SSDGE FEVD  +A +S TIK M+ED     +  D+ +PLPNV + IL KVI++C  H +      DD       DD+  WD +F+KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT          NQW  E
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162          
BLAST of CK935651 vs. ExPASy Swiss-Prot
Match: SKP1_MOUSE (S-phase kinase-associated protein 1 OS=Mus musculus GN=Skp1 PE=1 SV=3)

HSP 1 Score: 167.548 bits (423), Expect = 6.719e-41
Identity = 89/159 (55.97%), Postives = 108/159 (67.92%), Query Frame = 3
Query:   57 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCKKHVE--ASKSDDRAASGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 512
            I L+SSDGE FEVD  +A +S TIK M+ED     +  D+ +PLPNV + IL KVI++C  H +      DD       DD+  WD +F+KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT          NQW  E
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162          
BLAST of CK935651 vs. ExPASy Swiss-Prot
Match: SKP1_MACFA (S-phase kinase-associated protein 1 OS=Macaca fascicularis GN=SKP1 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.719e-41
Identity = 89/159 (55.97%), Postives = 108/159 (67.92%), Query Frame = 3
Query:   57 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCKKHVE--ASKSDDRAASGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 512
            I L+SSDGE FEVD  +A +S TIK M+ED     +  D+ +PLPNV + IL KVI++C  H +      DD       DD+  WD +F+KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT          NQW  E
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162          
BLAST of CK935651 vs. ExPASy Swiss-Prot
Match: SKP1_HUMAN (S-phase kinase-associated protein 1 OS=Homo sapiens GN=SKP1 PE=1 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 6.719e-41
Identity = 89/159 (55.97%), Postives = 108/159 (67.92%), Query Frame = 3
Query:   57 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCKKHVE--ASKSDDRAASGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 512
            I L+SSDGE FEVD  +A +S TIK M+ED     +  D+ +PLPNV + IL KVI++C  H +      DD       DD+  WD +F+KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT          NQW  E
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162          
BLAST of CK935651 vs. ExPASy Swiss-Prot
Match: SKP1_CHICK (S-phase kinase-associated protein 1 OS=Gallus gallus GN=SKP1 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.719e-41
Identity = 89/159 (55.97%), Postives = 108/159 (67.92%), Query Frame = 3
Query:   57 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCKKHVE--ASKSDDRAASGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 512
            I L+SSDGE FEVD  +A +S TIK M+ED     +  D+ +PLPNV + IL KVI++C  H +      DD       DD+  WD +F+KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT          NQW  E
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162          
BLAST of CK935651 vs. ExPASy Swiss-Prot
Match: SKP1_CAVPO (S-phase kinase-associated protein 1 OS=Cavia porcellus GN=SKP1 PE=2 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 6.719e-41
Identity = 89/159 (55.97%), Postives = 108/159 (67.92%), Query Frame = 3
Query:   57 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCKKHVE--ASKSDDRAASGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 512
            I L+SSDGE FEVD  +A +S TIK M+ED     +  D+ +PLPNV + IL KVI++C  H +      DD       DD+  WD +F+KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT          NQW  E
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162          
BLAST of CK935651 vs. ExPASy Swiss-Prot
Match: SKP1_BOVIN (S-phase kinase-associated protein 1 OS=Bos taurus GN=SKP1 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.719e-41
Identity = 89/159 (55.97%), Postives = 108/159 (67.92%), Query Frame = 3
Query:   57 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCKKHVE--ASKSDDRAASGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 512
            I L+SSDGE FEVD  +A +S TIK M+ED     +  D+ +PLPNV + IL KVI++C  H +      DD       DD+  WD +F+KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT          NQW  E
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162          
The following BLAST results are available for this feature:
BLAST of CK935651 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
ASK15_ARATH3.016e-4154.82SKP1-like protein 15 OS=Arabidopsis thaliana GN=AS... [more]
SKP1_XENLA6.719e-4155.97S-phase kinase-associated protein 1 OS=Xenopus lae... [more]
SKP1_RAT6.719e-4155.97S-phase kinase-associated protein 1 OS=Rattus norv... [more]
SKP1_PONAB6.719e-4155.97S-phase kinase-associated protein 1 OS=Pongo abeli... [more]
SKP1_MOUSE6.719e-4155.97S-phase kinase-associated protein 1 OS=Mus musculu... [more]
SKP1_MACFA6.719e-4155.97S-phase kinase-associated protein 1 OS=Macaca fasc... [more]
SKP1_HUMAN6.719e-4155.97S-phase kinase-associated protein 1 OS=Homo sapien... [more]
SKP1_CHICK6.719e-4155.97S-phase kinase-associated protein 1 OS=Gallus gall... [more]
SKP1_CAVPO6.719e-4155.97S-phase kinase-associated protein 1 OS=Cavia porce... [more]
SKP1_BOVIN6.719e-4155.97S-phase kinase-associated protein 1 OS=Bos taurus ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004553_C11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIF_C11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935651 ID=CK935651; Name=CK935651; organism=Citrus sinensis; type=EST; length=750bp
GGGAGGGTTTCAAGAGTGTGTTGGATCGATCGATCAGAATGTCAACGAGT
AAGAAAATCACGCTGAAGAGCTCGGATGGAGAGGCGTTCGAGGTCGATGA
AGCAGTGGCGTTGGAATCGCAGACGATCAAGCATATGATTGAGGACGATT
GCGCCGACAACGGAATCCCTTTGCCTAACGTTACCAGTAAGATCCTCTCT
AAGGTCATCGAGTACTGCAAGAAGCACGTCGAGGCATCTAAGTCCGACGA
TCGGGCCGCTAGCGGCGTCGATGATGATCTCAAGGCTTGGGATACCGATT
TCGTCAAAGTCGATCAGGCCACTCTCTTTGATCTTATTCTTGCGGCAAAC
TACCTGAACATCAAGAGCTTGCTGGACTTAACTTGCCAGACTGTTGCAGA
CATGATTAAGGGAAAGACTCCAGAGGAGATCCGCAAGACATTCAATATCA
AGAACGACTTTACCCCAGAAGAGGAGGAAGAGGTTCGTCGGGAGAATCAG
TGGGCTTTTGAGTGAAAGGATCTCAAATGACCAATTTGTAATTGTGTCTT
TTCTTTTTTGTTTTGCCTTCTTTTTGTTGTTGCTGCTGACTCAAATGTCT
TTAGCTGGTAAAAGCATCAAACCATTATTGTTTTAATGTCATATCATCCC
AACCTTCTCTGTATCATTAATTGTGAAGTCCTTTTGGATCTTGTTAGTGA
TGTTAATATGGTATATGTTCTTCCGTACCCATTAGTTTGTTTTCTCATGC
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