CK935651
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935651 vs. ExPASy Swiss-Prot
Match: SKP1_YEAST (Suppressor of kinetochore protein 1 OS=Saccharomyces cerevisiae GN=SKP1 PE=1 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 1.898e-27 Identity = 73/193 (37.82%), Postives = 105/193 (54.40%), Query Frame = 3 Query: 48 SKKITLKSSDGEAFEVDEAVALESQTIKHMI---------------------------------EDDCADNGI--PLPNVTSKILSKVIEYCKKHVEAS-----KSDDRAASGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWA 506 + + L S +GE F VD+ +A S +K+ + +DD D+ I P+PNV S +L KVIE+ + H +++ D R ++ VD +WD +F+KVDQ L+++ILAANYLNIK LLD C+ VA+MI+G++PEEIR+TFNI NDFTP N+WA Sbjct: 3 TSNVVLVSGEGERFTVDKKIAERSLLLKNYLNDMHDSNLQNNSDSESDSDSETNHKSKDNNNGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVD----SWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRENEWA 191
BLAST of CK935651 vs. ExPASy Swiss-Prot
Match: ASK6_ARATH (SKP1-like protein 6 OS=Arabidopsis thaliana GN=ASK6 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.273e-23 Identity = 57/87 (65.52%), Postives = 68/87 (78.16%), Query Frame = 3 Query: 126 IKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRAASGVDDDLKAWDTDFV-KVDQATLFDLILAANYLNIKSLLDLT 383 IK M EDDCADNGIPLPNVTSKIL VIEYCKKHV SK ++DLK WD +F+ K++Q+ LFD+++AANYLNI+SLLDLT Sbjct: 3 IKGMAEDDCADNGIPLPNVTSKILLLVIEYCKKHVVESK---------EEDLKKWDAEFMKKMEQSILFDVMMAANYLNIQSLLDLT 80
BLAST of CK935651 vs. ExPASy Swiss-Prot
Match: ASK21_ARATH (SKP1-like protein 21 OS=Arabidopsis thaliana GN=ASK21 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.017e-12 Identity = 46/141 (32.62%), Postives = 80/141 (56.74%), Query Frame = 3 Query: 57 ITLKSSDGEAFEVDEAVALESQTI-KHMIEDDCADN---GIPLPN-VTSKILSKVIEYCKKHVEASKSDDRAASGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFT 464 I L+++DG +V++ VA+ I + +I+ + I LP V +LS + +YC+ H +S+ + K +D F+++D L +L AA+ L +K L+DLT + +A +I+GKTPEEIR+ F++ +D T Sbjct: 18 IWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISLPQRVNPAMLSLIFDYCRFHQVPGRSNK--------ERKVYDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLT 150
BLAST of CK935651 vs. ExPASy Swiss-Prot
Match: ASK20_ARATH (SKP1-like protein 20 OS=Arabidopsis thaliana GN=ASK20 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.247e-11 Identity = 44/141 (31.21%), Postives = 80/141 (56.74%), Query Frame = 3 Query: 57 ITLKSSDGEAFEVDEAVALESQTI-KHMIEDDCA---DNGIPLPN-VTSKILSKVIEYCKKHVEASKSDDRAASGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFT 464 I L+++DG +V++ VA+ I + +I+ ++ I LP V + S +++YC+ H +S+ + K +D F+++D L +L AA+ L +K L+DLT + +A +I+GK PEEIR+ F++ +D T Sbjct: 18 IWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISLPQRVNPAMFSLILDYCRFHQLPGRSNK--------ERKTYDERFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKNPEEIREIFHLPDDLT 150 The following BLAST results are available for this feature:
BLAST of CK935651 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935651 ID=CK935651; Name=CK935651; organism=Citrus sinensis; type=EST; length=750bpback to top |