CK935654

Overview
NameCK935654
Unique NameCK935654
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935654 vs. ExPASy Swiss-Prot
Match: SAHH_METTH (Adenosylhomocysteinase OS=Methanobacterium thermoautotrophicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.061e-25
Identity = 75/246 (30.49%), Postives = 109/246 (44.31%), Query Frame = 1
Query:  169 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINXXDSVTKSKFDNLYGCRHSLPDGLMRATDVM 906
            +KVKD+S A  G  +I   +  MP L   +++F   +PFKG  I   LH+  +T  L  TL A GAEV    CN  STQD               W+GET +EY+    + LD      P++++DDG D   L+H                                         ++  ++ + ++G  EETTTG+ RL  M  +G L FP +   D+ TK  FDN YG   S  D +M  T+++
Sbjct:    3 YKVKDISLAPQGEKKIRWVQEHMPVLERIKSDFSEEKPFKGVTIGSCLHLEPKTINLGLTLQAGGAEVAMTGCNPLSTQDDATAAGAKMGLNMYGWRGETNEEYYENIHRVLD----HEPEILIDDGADMIFLVH-----------------------------------------RERPELLDGIIGACEETTTGINRLRAMAADGALKFPVMAVNDAYTKYLFDNRYGTGQSTFDSIMGTTNML 203          
BLAST of CK935654 vs. ExPASy Swiss-Prot
Match: SAHH_THEEB (Adenosylhomocysteinase OS=Thermosynechococcus elongatus (strain BP-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.923e-22
Identity = 84/260 (32.31%), Postives = 116/260 (44.62%), Query Frame = 1
Query:  130 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXX-WKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINXXDSVTKSKFDNLYGCRHSLPDGLMRATDVM 906
            M  S  KS +     VKDLS A  G+  IE A  EMP L   R  F   +PF G ++    H+T +TA L   L A GA+    + N  STQD                 KGE    Y      ALD  P    ++I+DDG D                                 +V T++++       + H++ + ++G +EETTTG+ RL  M  +G L FPAIN  D+ TK  FDN YG   S  DG++RAT+++
Sbjct:    1 MVSSPIKSEAPVRHDVKDLSLAPLGQQRIEWASREMPVLRQIRDRFEKEKPFAGIRLAACCHVTTETANLAIALKAGGADAVLIASNPLSTQDDVAASLVVNYGIPVFAQKGEDTATYMRHVNIALDHRP----NIIIDDGCD---------------------------------VVATLVKE-------RQHQISD-IIGTTEETTTGIVRLKAMFRDGVLTFPAINVNDADTKHFFDNRYGTGQSTLDGIIRATNIL 215          
BLAST of CK935654 vs. ExPASy Swiss-Prot
Match: SAHH_CYAP7 (Adenosylhomocysteinase OS=Cyanothece sp. (strain PCC 7424) GN=ahcY PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.923e-22
Identity = 80/248 (32.26%), Postives = 114/248 (45.97%), Query Frame = 1
Query:  166 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXW-KGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINXXDSVTKSKFDNLYGCRHSLPDGLMRATDVM 906
            ++++KD+S A  GR  IE A  EMP +   +  F   +PF+G ++    H+T +TA L   L A GA+    + N  STQD                 KGE    Y    + ALD  P    +LI+DDGGD T  +        I E+  ++ D                                 ++G +EETTTG+ RL  M ++G L FPA+N  D+ TK  FDN YG   S  DG++RAT+V+
Sbjct:   13 KYEIKDISLAPSGRQRIEWAGREMPVVKQIKDRFEKEKPFEGIRLIACCHVTTETANLAIALKAGGADAVLIASNPLSTQDDVAACLVADYGIPVFAIKGEDNATYHRHVQIALDHKP----NLIIDDGGDVTATL--------IQERKDQIAD---------------------------------IIGTTEETTTGIVRLAAMLKDGVLSFPAMNVNDADTKHFFDNRYGTGQSTLDGIIRATNVL 215          
BLAST of CK935654 vs. ExPASy Swiss-Prot
Match: SAHH_METAC (Adenosylhomocysteinase OS=Methanosarcina acetivorans GN=ahcY PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.511e-22
Identity = 75/236 (31.78%), Postives = 107/236 (45.34%), Query Frame = 1
Query:  202 GRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWK-GETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINXXDSVTKSKFDNLYGCRHSLPDGLMRATDVM 906
            G +++E A   MP +   R +F   +P KG K+  +LH+  +TAVL+ETL A GA+V    CN  STQD                + G    EY+   +K LD      PD+ +DDG D    +H+        E+T  LP                                 +++G  EETTTGV RL+ M++ G L  P I   D++TK  FDN YG   S  DG+ R T+++
Sbjct:   10 GNMKMEWARNHMPVIAIIREKFEKEKPLKGLKVGMALHVEAKTAVLVETLAAGGAQVAISGCNPLSTQDDVARALDTRKNISCFARYGCCTSEYYEAIDKVLDI----EPDITIDDGADLIFKLHK--------ERTDLLP---------------------------------KILGGCEETTTGVHRLHAMEKEGALKMPVIAVNDAMTKYLFDNRYGTGQSAWDGINRTTNLL 200          
BLAST of CK935654 vs. ExPASy Swiss-Prot
Match: SAHH_THEAC (Adenosylhomocysteinase OS=Thermoplasma acidophilum GN=ahcY PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.280e-22
Identity = 73/236 (30.93%), Postives = 104/236 (44.07%), Query Frame = 1
Query:  202 GRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH-XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINXXDSVTKSKFDNLYGCRHSLPDGLMRATDVM 906
            G L +  A   MP +   R  F   +PFKG K+  +LH+  +T +    L   GAEV+  SCN  S+ D                 KGET +EY+    + LD      PD+I+DDGGD T ++H   K                                          + + ++G +EETTTGV+RL  M+ +G LLFP  +  D+  K  FDN YG   S  DG+M AT+++
Sbjct:    6 GFLRLAWARDHMPVIAEIRKRFQAEKPFKGIKVAMALHVEAKTGIFALLLKEGGAEVKMASCNPLSSDDSVVQSLKEDYGMPVFARKGETSEEYYEYLHRTLD----VQPDIIIDDGGDLTKIVHTERK-----------------------------------------DLAKNILGGNEETTTGVQRLRAMERSGVLLFPMFDVNDANMKHLFDNRYGTGQSTLDGIMNATNLL 196          
BLAST of CK935654 vs. ExPASy Swiss-Prot
Match: SAHH_METMA (Adenosylhomocysteinase OS=Methanosarcina mazei GN=ahcY PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.284e-22
Identity = 74/236 (31.36%), Postives = 106/236 (44.92%), Query Frame = 1
Query:  202 GRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWK-GETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINXXDSVTKSKFDNLYGCRHSLPDGLMRATDVM 906
            G +++E A   MP L   R +F   +P KG K+  +LH+  +TAVL+ETL A GA+V    CN  STQD                K G    EY+   ++ LD      PD+ +DDG D    +H                                         K+  +M  +++G  EETTTGV RL+ M+++G L  P I   D++TK  FDN YG   S  DG+ R T+++
Sbjct:   10 GNMKMEWARNHMPVLAIIREKFEKEKPLKGLKVGMALHVEAKTAVLVETLAAGGAQVAISGCNPLSTQDDVAAALDTRENINCFAKYGCCTGEYYEAIDRVLDI----EPDITIDDGADLIFKLH-----------------------------------------KERQEMLAKILGGCEETTTGVHRLHAMEKDGALKMPVIAVNDAMTKYLFDNRYGTGQSAWDGINRTTNLL 200          
BLAST of CK935654 vs. ExPASy Swiss-Prot
Match: SAHH_THEVO (Adenosylhomocysteinase OS=Thermoplasma volcanium GN=ahcY PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.736e-21
Identity = 73/236 (30.93%), Postives = 103/236 (43.64%), Query Frame = 1
Query:  202 GRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH-XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINXXDSVTKSKFDNLYGCRHSLPDGLMRATDVM 906
            G L +E A   MP +   R  F   +PFKG  I  +LH+  +T +    L   GA VR  SCN  S+ D                 KGET +EY+   ++ L+      PD+I+DDGGD T L+H   K                                          + + ++G +EETTTGV RL  M++ G LLFP  +  D+  K  FDN YG   S  DG+M +T+++
Sbjct:    6 GFLRLEWARDHMPVIAEIRKRFLDEKPFKGINIAMALHVEAKTGIFSLLLKEGGANVRMASCNPLSSDDSVVESLKTDYGMPVFARKGETQEEYYENLQRTLE----KPPDIIIDDGGDLTKLVHTERK-----------------------------------------DLSKNIMGGNEETTTGVVRLKAMEKAGVLLFPMFDVNDANMKHLFDNRYGTGQSTLDGIMNSTNLL 196          
The following BLAST results are available for this feature:
BLAST of CK935654 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
SAHH_METTH7.061e-2530.49Adenosylhomocysteinase OS=Methanobacterium thermoa... [more]
SAHH_THEEB1.923e-2232.31Adenosylhomocysteinase OS=Thermosynechococcus elon... [more]
SAHH_CYAP71.923e-2232.26Adenosylhomocysteinase OS=Cyanothece sp. (strain P... [more]
SAHH_METAC2.511e-2231.78Adenosylhomocysteinase OS=Methanosarcina acetivora... [more]
SAHH_THEAC3.280e-2230.93Adenosylhomocysteinase OS=Thermoplasma acidophilum... [more]
SAHH_METMA4.284e-2231.36Adenosylhomocysteinase OS=Methanosarcina mazei GN=... [more]
SAHH_THEVO4.736e-2130.93Adenosylhomocysteinase OS=Thermoplasma volcanium G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004553_B07 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIF_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935654 ID=CK935654; Name=CK935654; organism=Citrus sinensis; type=EST; length=906bp
GGGGGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTG
TTTGGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCT
TTTAGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCGAGAAA
TCCGCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTT
CGGCCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGG
CTTGCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATC
ACCGGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCT
CACCGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAA
CCCAAGACCACGCGGCCGCCGCCATCGCACGTGACTCCGCCTCCGTCTTT
GCCTGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGC
CCTGGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGTG
GTGACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTGAGGAGATCTAC
GAGAAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGACAACGCCGAGTT
TCAGATTGTTTTGACTATCATTAGAGATGGGTTGAAGGCCGATCCCAAGA
AGTACCACAAAATGAAGGAAAGATTAGTTGGTGTTTCCGAAGAAACCACG
ACCGGTGTCAAGAGATTGTATCAGATGCAAGAAAATGGAACCCTCTTGTT
CCCTGCCATCAATGNNNNNGACTCTGTCACCAAGAGCAAGTTTGATAACT
TGTATGGATGCCGCCACTCGCTCCCAGATGGTTTGATGAGAGCTACTGAT
GTTATG
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