CK935656

Overview
NameCK935656
Unique NameCK935656
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1841 contig Csv1_Contig1841:1..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: NP24_SOLLC (Protein NP24 OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.885e-30
Identity = 86/236 (36.44%), Postives = 117/236 (49.58%), Query Frame = 2
Query:   92 LLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSCGVSLVDGFNVPMTVTPHE-GKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDC-SSPRELKVIFC 790
            LL  +Y  A+ I  + NNCP+ VW A  P  G   L RG  ++ +       AP      RIW RTGC + A G+ +C TGDCG  L+C G G   P TLA+++L    N L    +SLVDGFN+PMT  P +   G C  + C A++   CP+ L+V   PG      C + C  FG  + CC     +   C  +  S+FFK  CP   +Y  D P+    C       +V+FC
Sbjct:   13 LLCVTYTYAATI-EVRNNCPYTVWAASTPIGGGRRLNRGQTWVIN-------APRGTKMARIWGRTGCNFNAAGRGTCQTGDCGGVLQCTGWG-KPPNTLAEYALDQFSN-LDFWDISLVDGFNIPMTFAPTKPSGGKCHAIHCTANINGECPRALKV---PG-----GCNNPCTTFGGQQYCC-----TQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPGGSTNYRVVFC 225          
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: TPM1_SOLLC (Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.921e-30
Identity = 81/220 (36.82%), Postives = 108/220 (49.09%), Query Frame = 2
Query:  140 NNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSCGVSLVDGFNVPMTVTP-HEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDC-SSPRELKVIFC 790
            NNCP+ VW A  P  G   L+RG  ++ +       AP      RIW RT C +   G+ SC TGDCG  L+C G  G  P TLA+++L    N L    +SLVDGFN+PMT  P +   G C  + C A++   CP +L+V   PG      C + C  FG  + CC     +   C  +  S FFK  CP   +Y  D P+    C S     +V+FC
Sbjct:   20 NNCPYTVWAASTPIGGGRRLDRGQTWVIN-------APRGTKMARIWGRTNCNFDGDGRGSCQTGDCGGVLQCTG-WGKPPNTLAEYALDQFSN-LDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRV---PG-----GCNNPCTTFGGQQYCC-----TQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFC 217          
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 6.428e-30
Identity = 83/249 (33.33%), Postives = 119/249 (47.79%), Query Frame = 2
Query:   50 MASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSG-RIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSCGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 790
            M++   + +SA + +             ++NNCPF VW A  P  G   L+RG  ++ +        P     G R+W RTGC +   G+  C TGDC   L+C   G   P TLA+++L+   N+L    +SLVDGFNV M  +P  G G    + C AD+   CP  L  R+P G      C + C  F TD+ CC +       C  ++FS+FFK  CP   +Y  D  +    C +    KV+FC
Sbjct:    1 MSTFKSLSLSALLFIAFLFTCARGATFNIINNCPFTVWAAAVPGGGKR-LDRGQNWIIN--------PGAGTKGARVWPRTGCNFDGAGRGKCQTGDCNGLLQCQAFG-QPPNTLAEYALNQ-FNNLDFFDISLVDGFNVAMEFSPTSG-GCTRGIKCTADINGQCPNEL--RAPGG------CNNPCTVFKTDQYCCNSG-----NCGLTNFSKFFKDRCPDAYSYPKDDQTSTFTCPAGTNYKVVFC 224          
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: PRR1_TOBAC (Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.442e-29
Identity = 77/220 (35.00%), Postives = 106/220 (48.18%), Query Frame = 2
Query:  134 LVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSCGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 790
            +VN C + VW A  P  G   L+ G  +  ++     P   Q    RIW RT C +   G+ +C TGDC   LEC G G A P TLA+F+L+  + D     +SLVDGFN+PM  +P  G   C  + C A +   CP  L+ +          C + C    T+E CC N    P +C  +  S FFK  CP   +Y  D P+ +  C S    +V+FC
Sbjct:   30 IVNKCTYTVWAAASPGGGRR-LDSGQSWSINVN----PGTVQ---ARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGKA-PNTLAEFALNQPNQDFVD--ISLVDGFNIPMEFSPTNGG--CRNLRCTAPINEQCPAQLKTQG--------GCNNPCTVIKTNEYCCTN---GPGSCGPTDLSRFFKERCPDAYSYPQDDPTSLFTCPSGTNYRVVFC 225          
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: THM2_THADA (Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.700e-28
Identity = 88/248 (35.48%), Postives = 118/248 (47.58%), Query Frame = 2
Query:   50 MASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAH-GKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSCGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 790
            MA+T+  F     LLLL+    A+F   +VN C + VW A   + G   L+ GG  L+S    +         G+IWART C +   G+  C TGDCG  L+C   G   P TLA+FSL+    D     +S + GFNVPM  +P   +G C  V C AD++  CP  L+    PG G    C   C  F T E CC     +   C  + +S FFK  CP   +Y  D P+ +  C      +V FC
Sbjct:    1 MAATTCFFFLFPFLLLLTLSRAATF--EIVNRCSYTVWAAA--SKGDAALDAGGRQLNSGESWTINVEPGTKGGKIWARTDCYFDDSGRGICRTGDCGGLLQCKRFG-RPPTTLAEFSLNQYGKDYID--ISNIKGFNVPMDFSPTT-RG-CRGVRCAADIVGQCPAKLKA---PGGG----CNDACTVFQTSEYCC-----TTGKCGPTEYSRFFKRLCPDAFSYVLDKPTTV-TCPGSSNYRVTFC 226          
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.606e-28
Identity = 75/220 (34.09%), Postives = 100/220 (45.45%), Query Frame = 2
Query:  134 LVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSCGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 790
            +VN C + VW A  P         GG  L+S    S          RIW RT C +   G+ +C TGDC   LEC G G   P TLA+F+L+  + D     +SLVDGFN+PM  +P  G   C  + C A +   CP  L+ +          C + C    T+E CC N    P +C  +  S FFK  CP   +Y  D P  +  C      +V+FC
Sbjct:   30 IVNQCTYTVWAAASPG--------GGRQLNSGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYG-KPPNTLAEFALNQPNQDFVD--ISLVDGFNIPMEFSPTNGG--CRNLRCTAPINEQCPAQLKTQG--------GCNNPCTVIKTNEFCCTN---GPGSCGPTDLSRFFKARCPDAYSYPQDDPPSLFTCPPGTNYRVVFC 225          
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: OSL3_ARATH (Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 4.606e-28
Identity = 81/235 (34.47%), Postives = 115/235 (48.94%), Query Frame = 2
Query:   89 LLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSCGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 790
            LLL+S+   A+F   ++N C + VW A  P  G   L+ G  +            A     RIW RT C + + G+  C TGDC   L+C G G   P TLA+++L+   N+L    +SLVDGFN+PM  +P      C  + C AD+   CP  L  R+P G      C + C  F T++ CC N   S   C  + +S FFK  CP   +Y  D P+    C++    +V+FC
Sbjct:   14 LLLISTATAATF--EILNQCSYTVWAAASPGGGRR-LDAGQSW-------RLDVAAGTKMARIWGRTNCNFDSSGRGRCQTGDCSGGLQCTGWG-QPPNTLAEYALNQ-FNNLDFYDISLVDGFNIPMEFSPTSSN--CHRILCTADINGQCPNVL--RAPGG------CNNPCTVFQTNQYCCTNGQGS---CSDTEYSRFFKQRCPDAYSYPQDDPTSTFTCTN-TNYRVVFC 222          
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: THM1_THADA (Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.140e-25
Identity = 78/220 (35.45%), Postives = 102/220 (46.36%), Query Frame = 2
Query:  134 LVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAH-GKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSCGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 790
            +VN C + VW A   + G   L+ GG  L+S    +         G+IWART C +   G   C TGDCG  L C   G   P TLA+FSL+    D     +S + GFNVPM  +P   +G C  V C AD++  CP  L+    PG G    C   C  F T E CC     +   C  + +S FFK  CP   +Y  D P+ +  C      +V FC
Sbjct:    5 IVNRCSYTVWAAA--SKGDAALDAGGRQLNSGESWTINVEPGTNGGKIWARTDCYFDDSGSGICKTGDCGGLLRCKRFG-RPPTTLAEFSLNQYGKDYID--ISNIKGFNVPMNFSPTT-RG-CRGVRCAADIVGQCPAKLKA---PGGG----CNDACTVFQTSEYCC-----TTGKCGPTEYSRFFKRLCPDAFSYVLDKPTTV-TCPGSSNYRVTFC 204          
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: TLP_WHEAT (Thaumatin-like protein PWIR2 OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.137e-18
Identity = 59/140 (42.14%), Postives = 80/140 (57.14%), Query Frame = 2
Query:   56 STSPIFISATILLLLSSYAKASFILT--LVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSCGVSLVDGFNVPM 469
            +TSP+     + LLL+ +A  +   T  + NNC F +WPA     G PV   GGF L S    S   PA   +GRIWARTGC++  G  SC TGDCG +L C+ L G  PATLA++++  G        +S++DGFN+ M
Sbjct:    2 ATSPV-----LFLLLAVFAAGASAATFNIKNNCGFTIWPA-----GIPV--GGGFALGSGQTSSINVPAGTQAGRIWARTGCSFNGGSGSCQTGDCGGQLSCS-LSGRPPATLAEYTIGGGSTQ-DFYDISVIDGFNLAM 127          
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: PR1C_HORVU (Pathogenesis-related protein 1C OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.485e-18
Identity = 58/133 (43.61%), Postives = 76/133 (57.14%), Query Frame = 2
Query:   77 SATILLLLSSYAKASFILT--LVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSCGVSLVDGFNVPM 469
            SA + LLL+ +A  +   T  + NNC   +WPA     G PV   GGF L S    S   PA   +GRIWARTGC++  G  SC TGDCG +L C+ L G  PATLA+F++  G        +S++DGFN+ M
Sbjct:    4 SAVLFLLLAVFAAGASAATFNIKNNCGSTIWPA-----GIPV--GGGFELGSGQTSSINVPAGTQAGRIWARTGCSFNGGSGSCQTGDCGGQLSCS-LSGRPPATLAEFTIGGGSTQ-DFYDISVIDGFNLAM 127          
The following BLAST results are available for this feature:
BLAST of CK935656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
NP24_SOLLC2.885e-3036.44Protein NP24 OS=Solanum lycopersicum PE=1 SV=2[more]
TPM1_SOLLC4.921e-3036.82Osmotin-like protein TPM-1 (Fragment) OS=Solanum l... [more]
TLP_ACTDE6.428e-3033.33Thaumatin-like protein OS=Actinidia deliciosa GN=t... [more]
PRR1_TOBAC2.442e-2935.00Pathogenesis-related protein R major form OS=Nicot... [more]
THM2_THADA2.700e-2835.48Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1[more]
PRR2_TOBAC4.606e-2834.09Pathogenesis-related protein R minor form OS=Nicot... [more]
OSL3_ARATH4.606e-2834.47Osmotin-like protein OSM34 OS=Arabidopsis thaliana... [more]
THM1_THADA2.140e-2535.45Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1[more]
TLP_WHEAT1.137e-1842.14Thaumatin-like protein PWIR2 OS=Triticum aestivum ... [more]
PR1C_HORVU1.485e-1843.61Pathogenesis-related protein 1C OS=Hordeum vulgare... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004553_B10 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIF_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935656 ID=CK935656; Name=CK935656; organism=Citrus sinensis; type=EST; length=843bp
GGGGACACAACACCTGNNNTTGTTGTTTTTAGTTTTTCTTAAAACGAAAA
TGGCCTCAACTTCGCCCATTTTCATTTCAGCAACTATCCTTCTTCTCCTC
AGCTCCTACGCCAAAGCAAGCTTCATACTGACCCTAGTCAACAACTGCCC
CTTCCCCGTCTGGCCGGCCATCCAGCCCAACGCCGGCCACCCAGTCCTCG
AACGTGGCGGCTTCTATCTCCATAGCCTCACCCACCGCTCCTTCCCCGCT
CCGGCCCAGCACTGGTCGGGCCGGATCTGGGCCAGAACCGGCTGCACCTA
CGCCCACGGCAAATTCTCCTGCGTCACGGGCGACTGCGGCCACCGCTTGG
AATGCAACGGACTCGGCGGGGCGACTCCAGCCACCCTGGCCCAGTTCAGC
CTCCACCACGGCCACAACGACCTCTCCTCCTGCGGCGTCTCTCTAGTCGA
CGGCTTCAACGTCCCCATGACTGTCACCCCGCACGAGGGCAAGGGCGTCT
GTCCGGTAGTGGGTTGTCGCGCTGACCTGCTAGCCACGTGTCCTCAGAAC
CTGCAGGTGAGGTCACCGCCGGGTCACGGCCGCGTGGTGGCATGTAAGAG
TGGGTGTGAGGCGTTTGGTACGGACGAGCTGTGTTGTAGGAACCATTACA
ACAGTCCGCAGACATGCCGGGCTTCGAGCTTTTCGGAGTTCTTCAAGCAC
GCTTGTCCAGCCACGATGACTTATGCCCATGACAGCCCTTCGCTCATGCA
TGACTGCTCCTCGCCACGTGAGCTAAAAGTTATTTTCTGTCACTAGAGAA
GCATGAGAATAATAATAAGCTGGAGCATNCAGCTTCACAGTGC
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