CK935656
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: PR1A_HORVU (Pathogenesis-related protein 1A/1B OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.485e-18 Identity = 58/133 (43.61%), Postives = 76/133 (57.14%), Query Frame = 2 Query: 77 SATILLLLSSYAKASFILT--LVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSCGVSLVDGFNVPM 469 SA + LLL+ +A + T + NNC +WPA G PV GGF L S S PA +GRIWARTGC++ G SC TGDCG +L C+ L G PATLA+F++ G +S++DGFN+ M Sbjct: 4 SAVLFLLLAVFAAGASAATFNIKNNCGSTIWPA-----GIPV--GGGFELGSGQTSSINVPAGTQAGRIWARTGCSFNGGSGSCQTGDCGGQLSCS-LSGQPPATLAEFTIGGGSTQ-DFYDISVIDGFNLAM 127
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: RST3_AVESA (Thaumatin-like pathogenesis-related protein 3 OS=Avena sativa GN=RASTL-3 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.371e-18 Identity = 59/150 (39.33%), Postives = 82/150 (54.67%), Query Frame = 2 Query: 77 SATILLLLSSYAKASFILT--LVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSCGVSLVDGFNVPMTVTPHEGKGV-CPVVGC 517 SA + LLL+ +A + T + NNC F VWPA G PV GGF L+S + PA +GRIW RTGC++ +G+ SC TGDC L C G PATLA++++ G D +S++DG+N+ M + G + C GC Sbjct: 5 SAVLFLLLAVFAAGASAATFRITNNCGFTVWPA-----GIPV--GGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFNNGRGSCATGDCAGALSCTLSG--QPATLAEYTI-GGSQDFYD--ISVIDGYNLAMDFSCSTGVALKCRDSGC 142
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: RST1_AVESA (Thaumatin-like pathogenesis-related protein 1 OS=Avena sativa GN=RASTL-1 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.627e-18 Identity = 56/133 (42.11%), Postives = 76/133 (57.14%), Query Frame = 2 Query: 77 SATILLLLSSYAKASFILT--LVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSCGVSLVDGFNVPM 469 SA + LLL+ +A + T + NNC F VWPA G PV GGF L+S + PA +GRIW RTGC++ +G+ SC TGDC L C G PATLA++++ G D +S++DGFN+ M Sbjct: 5 SAVLFLLLAVFAAGASAATFRITNNCGFTVWPA-----GIPV--GGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFNNGRGSCATGDCAGALSCTLSG--QPATLAEYTI-GGSQDFYD--ISVIDGFNLAM 125
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: RST2_AVESA (Thaumatin-like pathogenesis-related protein 2 OS=Avena sativa GN=RASTL-2 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.240e-17 Identity = 54/133 (40.60%), Postives = 75/133 (56.39%), Query Frame = 2 Query: 77 SATILLLLSSYAKASFILT--LVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSCGVSLVDGFNVPM 469 SA + LL+ +A + T + NNC F VWPA G PV GGF L+S + PA +GRIW RTGC++ +G+ SC TGDC L C G PATLA++++ G D +S++DG+N+ M Sbjct: 5 SAVLFFLLAVFAAGASAATFRITNNCGFTVWPA-----GIPV--GGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFNNGRGSCATGDCAGALSCTLSG--QPATLAEYTI-GGSQDFYD--ISVIDGYNLAM 125
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: TLP_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os12g0628600 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.622e-15 Identity = 52/147 (35.37%), Postives = 75/147 (51.02%), Query Frame = 2 Query: 53 ASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSCGVSLVDGFNVPMTVTPHEG 490 A++S + + + L + A A+ T+ N C F VWPA P G L G + + PA SGR+W RTGC++ G+ SC TGDC L C L G P TLA+F++ G D +S++DG+NV M+ + G Sbjct: 5 ATSSAVLVVVLVATLAAGGANAA-TFTITNRCSFTVWPAATPVGGGVQLSPGQTW-------TINVPAGTSSGRVWGRTGCSFDGSGRGSCATGDCAGALSCT-LSGQKPLTLAEFTI-GGSQDFYD--LSVIDGYNVAMSFSCSSG 139
BLAST of CK935656 vs. ExPASy Swiss-Prot
Match: RST4_AVESA (Thaumatin-like pathogenesis-related protein 4 OS=Avena sativa GN=RASTL-4 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.622e-15 Identity = 52/134 (38.81%), Postives = 71/134 (52.99%), Query Frame = 2 Query: 77 SATILLLLSSYAKASF---ILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSCGVSLVDGFNVPM 469 S+T+L LL + AS T+ NNC + VWPA P G L++G + + PA SGRIW RTGC++ G SC TGDC L C G PATLA+FS+ H+ +S++D +N+ M Sbjct: 4 SSTVLFLLLAVFAASASAATFTITNNCGYTVWPAAIPVGGGQQLDQGQTW-------TLNVPAGTNSGRIWGRTGCSFNGGSGSCQTGDCAGALSCTLSG--QPATLAEFSIGGEHDYYD---ISVIDVYNLAM 125 The following BLAST results are available for this feature:
BLAST of CK935656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935656 ID=CK935656; Name=CK935656; organism=Citrus sinensis; type=EST; length=843bpback to top |