CK935672
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935672 vs. ExPASy Swiss-Prot
Match: RL26_LITLI (60S ribosomal protein L26 OS=Littorina littorea GN=RPL26 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.182e-35 Identity = 74/106 (69.81%), Postives = 90/106 (84.91%), Query Frame = 1 Query: 73 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINSSKVVI 387 MK+N VSS R KNRK HF APS +RR +MS+P+S +LRQKYN RSMP+RKDDEVQVVRG +KG++ GKVVQVYR+K+V+HIERI REK NG+TV VGI+ SKV+I Sbjct: 1 MKFNKMVSSDRGKNRKRHFNAPSHMRRKIMSSPMSKELRQKYNCRSMPIRKDDEVQVVRGHFKGQQVGKVVQVYRKKFVVHIERIQREKANGATVYVGIHPSKVLI 106
BLAST of CK935672 vs. ExPASy Swiss-Prot
Match: RL26_SCHPO (60S ribosomal protein L26 OS=Schizosaccharomyces pombe GN=rpl26 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.062e-34 Identity = 68/106 (64.15%), Postives = 92/106 (86.79%), Query Frame = 1 Query: 73 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINSSKVVIT 390 MK++ V+SSRRK RKAHF APSSVRR+LMSAPLS +LR++Y +RS+PVR+DD++ V+RG+ KGREGK+ VYR+K+++ IER+TREK NG++ VGI++SKVVIT Sbjct: 1 MKFSRDVTSSRRKQRKAHFGAPSSVRRVLMSAPLSKELREQYKIRSLPVRRDDQITVIRGSNKGREGKITSVYRKKFLLLIERVTREKANGASAPVGIDASKVVIT 106
BLAST of CK935672 vs. ExPASy Swiss-Prot
Match: RL26_CHICK (60S ribosomal protein L26 (Fragment) OS=Gallus gallus GN=RPL26 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.134e-31 Identity = 67/90 (74.44%), Postives = 81/90 (90.00%), Query Frame = 1 Query: 124 HFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINSSKVVIT 390 HF APS +RR +MS+PLS +LRQKYNVRSMP+RKDDEVQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+ SKVVIT Sbjct: 1 HFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVIT 90
BLAST of CK935672 vs. ExPASy Swiss-Prot
Match: RL26_DICDI (60S ribosomal protein L26 OS=Dictyostelium discoideum GN=rpl26 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.755e-31 Identity = 67/106 (63.21%), Postives = 82/106 (77.36%), Query Frame = 1 Query: 73 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINSSKVVIT 390 MK N VSSSRRK+RKAHFTA S RRI MSA LS DLR KYNVRS+P+RKDDEV+VV G K EGKVV YR+K+VIHI+++T K NG+T +G++ S V++T Sbjct: 1 MKRNTNVSSSRRKSRKAHFTASSGERRIRMSAALSHDLRTKYNVRSLPIRKDDEVRVVCGDNKNHEGKVVACYRKKYVIHIDKLTVTKTNGNTAQIGVSPSNVILT 106
BLAST of CK935672 vs. ExPASy Swiss-Prot
Match: RL26_CAEEL (60S ribosomal protein L26 OS=Caenorhabditis elegans GN=rpl-26 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.110e-31 Identity = 64/106 (60.38%), Postives = 85/106 (80.19%), Query Frame = 1 Query: 73 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINSSKVVIT 390 MK NP VSS K+RKAHF APS RR +MSAPL+ +LR K+ +R++P+R DDEV V+RG +KG G+V++ YR+K+VIHI++ITREK NGSTV++GI+ SKV IT Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRGRHKGNTGRVLRCYRKKFVIHIDKITREKANGSTVHIGIHPSKVAIT 106
BLAST of CK935672 vs. ExPASy Swiss-Prot
Match: RL26B_YEAST (60S ribosomal protein L26-B OS=Saccharomyces cerevisiae GN=RPL26B PE=1 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.295e-28 Identity = 57/100 (57.00%), Postives = 84/100 (84.00%), Query Frame = 1 Query: 91 VSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINSSKVVIT 390 VSS RRK RKA+FTAPSS RR+L+SAPLS +LR +Y ++++P+R+DDEV VVRG+ KG+EGK+ VYR K+ + ++++T+EKVNG++V + ++ SK+VIT Sbjct: 8 VSSDRRKARKAYFTAPSSERRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQEGKISSVYRLKFAVQVDKVTKEKVNGASVPINLHPSKLVIT 107
BLAST of CK935672 vs. ExPASy Swiss-Prot
Match: RL26A_YEAST (60S ribosomal protein L26-A OS=Saccharomyces cerevisiae GN=RPL26A PE=1 SV=3) HSP 1 Score: 126.716 bits (317), Expect = 1.295e-28 Identity = 57/100 (57.00%), Postives = 84/100 (84.00%), Query Frame = 1 Query: 91 VSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINSSKVVIT 390 VSS RRK RKA+FTAPSS RR+L+SAPLS +LR +Y ++++P+R+DDEV VVRG+ KG+EGK+ VYR K+ + ++++T+EKVNG++V + ++ SK+VIT Sbjct: 8 VSSDRRKARKAYFTAPSSQRRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQEGKISSVYRLKFAVQVDKVTKEKVNGASVPINLHPSKLVIT 107
BLAST of CK935672 vs. ExPASy Swiss-Prot
Match: RL24_PYRHO (50S ribosomal protein L24P OS=Pyrococcus horikoshii GN=rpl24p PE=3 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 4.175e-19 Identity = 51/105 (48.57%), Postives = 73/105 (69.52%), Query Frame = 1 Query: 73 MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINSSKVVI 387 MK N S RK RK + AP VR+ +MSAPLS +LR+KY VR++PVR D+V+++RG +KG EGKVV+V +++ I++E +T KVNG+ V I+ S V+I Sbjct: 1 MKMN---SKQPRKQRKFLYNAPLHVRQKMMSAPLSKELREKYKVRNLPVRVGDKVRIMRGDFKGYEGKVVEVDLKRYRIYVEGVTLRKVNGTEVFYPIHPSNVMI 102
BLAST of CK935672 vs. ExPASy Swiss-Prot
Match: RL24_PYRFU (50S ribosomal protein L24P OS=Pyrococcus furiosus GN=rpl24p PE=3 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 5.453e-19 Identity = 49/98 (50.00%), Postives = 68/98 (69.39%), Query Frame = 1 Query: 94 SSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINSSKVVI 387 S RK RK + AP VR+ LMSAPLS +LR+KY VR++PVR D+V+++RG YKG EGKVV+V +++ I++E T K NG+ V I+ S V+I Sbjct: 5 SKQPRKQRKFLYNAPLHVRQKLMSAPLSRELREKYKVRNLPVRVGDKVRIMRGDYKGHEGKVVEVDLKRYRIYVEGATLRKTNGTEVFYPIHPSNVMI 102
BLAST of CK935672 vs. ExPASy Swiss-Prot
Match: RL24_PYRKO (50S ribosomal protein L24P OS=Pyrococcus kodakaraensis GN=rpl24p PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.616e-18 Identity = 45/94 (47.87%), Postives = 68/94 (72.34%), Query Frame = 1 Query: 106 RKNRKAHFTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINSSKVVI 387 RK RK + AP +R +MSAPLS +LR+KY VR++P+R D+V+V+RG +KG EGKVV+V R++ IH+E +T +K +G+ V ++ S V+I Sbjct: 9 RKQRKFLYNAPLHLRGKIMSAPLSKELREKYGVRNLPIRVGDKVKVMRGDFKGVEGKVVEVDLRRYRIHVEGVTHKKTDGTEVFYPLHPSNVMI 102 The following BLAST results are available for this feature:
BLAST of CK935672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935672 ID=CK935672; Name=CK935672; organism=Citrus sinensis; type=EST; length=742bpback to top |