CK935676

Overview
NameCK935676
Unique NameCK935676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: YOXD_BACSU (Uncharacterized oxidoreductase yoxD OS=Bacillus subtilis GN=yoxD PE=3 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.956e-22
Identity = 73/206 (35.44%), Postives = 109/206 (52.91%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPD-HHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDM---LTSCFGTSAASYQPPD 680
            +T LITG  RG+GRA A  LAK G  +    RT   +  +  E+        F   D++    V +    V E+ G  DI++NNAG I+K     D+S +E++ +I  N+ G+ ++ R  +P MI  K G I+N+SS  G+ GAA+ + Y ASK+AV GL+ S+ +EV    + + AL P  + +DM   L    G      QP D
Sbjct:    7 KTALITGGGRGIGRATALALAKEGVNIGLIGRTSANVEKVAEEVKALGVKAAFAAADVKDADQVNQAVAQVKEQLGDIDILINNAG-ISKFGGFLDLSADEWENIIQVNLMGVYHVTRAVLPEMIERKAGDIINISSTAGQRGAAVTSAYSASKFAVLGLTESLMQEVRKHNIRVSALTPSTVASDMSIELNLTDGNPEKVMQPED 211          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_VIBCH (3-oxoacyl-[acyl-carrier-protein] reductase OS=Vibrio cholerae GN=fabG PE=3 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.656e-21
Identity = 63/186 (33.87%), Postives = 109/186 (58.60%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            +  L+TG SRG+G+A+A+ LA+RG  VIG + ++    ++   L +    + LNV   +  S+E + + + ++ G  DI+VNNAG I ++N +  +  EE+  +++TN+  I  + +  +  M+  +QG I+N+ S  G  G A  A Y A+K  V G ++S+A+EV   G+ +  + PG I TDM
Sbjct:    6 KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVT--NPESIEAVLKAITDEFGGVDILVNNAG-ITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDM 188          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DHKR_STRCM (Monensin polyketide synthase putative ketoacyl reductase OS=Streptomyces cinnamonensis PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.217e-21
Identity = 69/205 (33.66%), Postives = 109/205 (53.17%), Query Frame = 3
Query:   66 KSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNV-DIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPL--MIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDMLTSCFGTSAASY 668
            +S SR  L+TG + G+G A A+ LA +GH V   +RT+  + +    L N        V D+R  +SV    +  V++ G  D++VNNAG  +      D++ E +D VIDTN+  +  M R  +    M   ++G I+N++S  G+ G  L APY ASK  V G ++++  E+ P G+ + A+ PG + T M        AA+Y
Sbjct:    3 QSTSRVALVTGATSGIGLATARLLAAQGHLVFLGARTESDVIATVKALRNDGLEAEGQVLDVRDGASVTAFVQAAVDRYGRIDVLVNNAGR-SGGGVTADLTDELWDDVIDTNLNSVFRMTRAVLTTGGMRTRERGRIINVASTAGKQGVVLGAPYSASKHGVVGFTKALGNELAPTGITVNAVCPGYVETPMAQRVRQGYAAAY 206          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_VIBHA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Vibrio harveyi GN=fabG PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.831e-20
Identity = 64/186 (34.41%), Postives = 105/186 (56.45%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            +  L+TG SRG+GRA+A+ L +RG TVIG + ++    ++   L      L LNV      S+E   + + ++ G  DI+VNNAG I ++N +  +  +E++ +I+TN+  I  M +  +  M+  + G I+N+ S  G  G A    Y A+K  V G ++S+A+EV   G+ +  + PG I TDM
Sbjct:    6 KIALVTGASRGIGRAIAELLVERGATVIGTATSEGGAAAISEYLGENGKGLALNVT--DVESIEATLKTINDECGAIDILVNNAG-ITRDNLLMRMKDDEWNDIINTNLTPIYRMSKAVLRGMMKKRAGRIINVGSVVGTMGNAGQTNYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDM 188          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_HAEIN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Haemophilus influenzae GN=fabG PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.391e-20
Identity = 63/186 (33.87%), Postives = 105/186 (56.45%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDM 632
            +  L+TG +RG+GRA+A+EL+ +G  VIG + ++    ++ + L +    L LNV      S+E L   +    G  DI+VNNAG I ++N +  +  EE+  ++ TN+  + ++ +  +  M+  + G I+N+ S  G +G      YCA+K  V G S+S+AKEV   G+ +  + PG I TDM
Sbjct:    4 KIALVTGSTRGIGRAIAEELSSKGAFVIGTATSEKGAEAISAYLGDKGKGLVLNVT--DKESIETLLEQIKNDFGDIDILVNNAG-ITRDNLLMRMKDEEWFDIMQTNLTSVYHLSKAMLRSMMKKRFGRIINIGSVVGSTGNPGQTNYCAAKAGVVGFSKSLAKEVAARGITVNVVAPGFIATDM 186          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_BACSU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Bacillus subtilis GN=fabG PE=3 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 3.123e-20
Identity = 64/188 (34.04%), Postives = 107/188 (56.91%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRG-HTVIGCSRTQDKLTSLQSELPNPDHH-LFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            +T ++TG SRG+GR++A +LAK G + V+  S  + K   +  E+ +     + +  D+ +   V+ + +  +      DI+VNNAG I ++N I  +  +E+D VI+ N+KG+ N  +     M+  + G I+N+SS  G SG    A Y A+K  V GL++S AKE+    + + A+ PG I+TDM
Sbjct:    5 KTAIVTGASRGIGRSIALDLAKSGANVVVNYSGNEAKANEVVDEIKSMGRKAIAVKADVSNPEDVQNMIKETLSVFSTIDILVNNAG-ITRDNLIMRMKEDEWDDVININLKGVFNCTKAVTRQMMKQRSGRIINVSSIVGVSGNPGQANYVAAKAGVIGLTKSSAKELASRNITVNAIAPGFISTDM 191          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_SHIFL (3-oxoacyl-[acyl-carrier-protein] reductase OS=Shigella flexneri GN=fabG PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.078e-20
Identity = 62/186 (33.33%), Postives = 104/186 (55.91%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            +  L+TG SRG+GRA+A+ LA RG  VIG + +++   ++   L      L LNV     +S+E +   +  + G  DI+VNNAG I ++N +  +  EE++ +I+TN+  +  + +  +  M+  + G I+ + S  G  G    A Y A+K  + G S+S+A+EV   G+ +  + PG I TDM
Sbjct:    6 KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNV--TDPASIESVLEKIRAEFGEVDILVNNAG-ITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDM 188          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_ECOLI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Escherichia coli (strain K12) GN=fabG PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.078e-20
Identity = 62/186 (33.33%), Postives = 104/186 (55.91%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            +  L+TG SRG+GRA+A+ LA RG  VIG + +++   ++   L      L LNV     +S+E +   +  + G  DI+VNNAG I ++N +  +  EE++ +I+TN+  +  + +  +  M+  + G I+ + S  G  G    A Y A+K  + G S+S+A+EV   G+ +  + PG I TDM
Sbjct:    6 KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNV--TDPASIESVLEKIRAEFGEVDILVNNAG-ITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDM 188          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: UCPA_SALTY (Oxidoreductase ucpA OS=Salmonella typhimurium GN=ucpA PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.326e-20
Identity = 71/197 (36.04%), Postives = 103/197 (52.28%), Query Frame = 3
Query:   60 IGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLF-LNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGA-ALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDMLTS 641
            +GK   +T LITG S+G+G  +A+  A+ G  +I      D++  L  EL    H    +  D+R  +SV+       E +G  DI+VNNAG     N + D+S E+ D  ID N+KG+ N+ +  +P MI  K G IV MSS  G   A      Y  SK A+ GL++S+A E    G+ + A+ PG + T M  S
Sbjct:    1 MGKLTGKTALITGASQGIGEGIARVFARHGANLILLD-ISDEIEKLADELGGRGHRCTAVKADVRDFASVQAAVARAKETEGRIDILVNNAGVCRLGNFL-DMSEEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVADPGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAES 195          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: UCPA_SALTI (Oxidoreductase ucpA OS=Salmonella typhi GN=ucpA PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.326e-20
Identity = 71/197 (36.04%), Postives = 103/197 (52.28%), Query Frame = 3
Query:   60 IGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLF-LNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGA-ALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDMLTS 641
            +GK   +T LITG S+G+G  +A+  A+ G  +I      D++  L  EL    H    +  D+R  +SV+       E +G  DI+VNNAG     N + D+S E+ D  ID N+KG+ N+ +  +P MI  K G IV MSS  G   A      Y  SK A+ GL++S+A E    G+ + A+ PG + T M  S
Sbjct:    1 MGKLTGKTALITGASQGIGEGIARVFARHGANLILLD-ISDEIEKLADELGGRGHRCTAVKADVRDFASVQAAVARAKETEGRIDILVNNAGVCRLGNFL-DMSEEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVADPGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAES 195          
The following BLAST results are available for this feature:
BLAST of CK935676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
YOXD_BACSU1.956e-2235.44Uncharacterized oxidoreductase yoxD OS=Bacillus su... [more]
FABG_VIBCH1.656e-2133.873-oxoacyl-[acyl-carrier-protein] reductase OS=Vibr... [more]
DHKR_STRCM8.217e-2133.66Monensin polyketide synthase putative ketoacyl red... [more]
FABG_VIBHA1.831e-2034.413-oxoacyl-[acyl-carrier-protein] reductase OS=Vibr... [more]
FABG_HAEIN2.391e-2033.873-oxoacyl-[acyl-carrier-protein] reductase OS=Haem... [more]
FABG_BACSU3.123e-2034.043-oxoacyl-[acyl-carrier-protein] reductase OS=Baci... [more]
FABG_SHIFL4.078e-2033.333-oxoacyl-[acyl-carrier-protein] reductase OS=Shig... [more]
FABG_ECOLI4.078e-2033.333-oxoacyl-[acyl-carrier-protein] reductase OS=Esch... [more]
UCPA_SALTY5.326e-2036.04Oxidoreductase ucpA OS=Salmonella typhimurium GN=u... [more]
UCPA_SALTI5.326e-2036.04Oxidoreductase ucpA OS=Salmonella typhi GN=ucpA PE... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_G11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935676 ID=CK935676; Name=CK935676; organism=Citrus sinensis; type=EST; length=924bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAAATCCTGGTGTTATTAACACTGACATGCTTACGTCCTGCTTTGGC
ACTTCTGCTGCATCATACCAGCCACCTGATGCATGGGCTTTGAAGGCAGC
TACGACGATACTCAATCTTACAGGAGCAGACAATGGTGCATCTCTTACGG
TGTGACAGAAGCTTTTACATTCAAAATGCTGGGATCCAGCTAGGCGAGCG
TAACAGTTCACTGATAAAATCATATTCACTCTTCACTCATTGAATCAAAA
AGTAGAGCAGAGTGAACTNCATTCATCTTTTGTGACTTCTATGACACCTN
NNNNNCAGGAAAGCGGTTATTCTT
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