CK935676

Overview
NameCK935676
Unique NameCK935676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: YB45_SCHPO (Uncharacterized oxidoreductase C30D10.05c OS=Schizosaccharomyces pombe GN=SPBC30D10.05c PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.271e-13
Identity = 57/194 (29.38%), Postives = 96/194 (49.48%), Query Frame = 3
Query:   60 IGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPDGMAIVALNPGVINTDMLTS 641
            + ++  + +L+TG S+G+G A A+ L K+   +        +L +L  + P+   H+  +V     +S+E      ++K G  D ++ NAG +    KI D    E+  + D N   +   +++ IP +   K G IV +SSG         A YC SK A+  L  ++  E PD M+ VA+ PGV++T M  S
Sbjct:    1 MAETAEKVILLTGSSKGIGLATAEALQKKAKVIAVSRSLTPELETLLIQNPDSFVHVKGDVTEVGKASIE----TAIKKFGKLDSVILNAGVLEPIAKIADADINEWRKLFDINFFSVVETVKYAIPHLRKTK-GTIVIVSSGAAVRVFPAWAAYCCSKAAINMLVMNLGSEEPDIMS-VAVRPGVVDTPMQVS 188          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: NODG_RHIS3 (Nodulation protein G OS=Rhizobium sp. (strain N33) GN=nodG PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.271e-13
Identity = 57/187 (30.48%), Postives = 98/187 (52.41%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQ-DKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            R  L+TG S G+G A+A+ L  +G  ++G   T+ +KL +L +EL   D       ++ +   V+ L +         DI+VNNAG I K+     +S  ++DTV++ N+  +  + R     M+  + G I+N++S  G +G      YCASK  + G S+S+A+E+    + +  + PG I + M
Sbjct:    7 RKALVTGASGGIGEAIARVLHAQG-AIVGLHGTRVEKLETLAAELG--DRVKLFPANLSNRDEVKALGQKAEADLEGVDILVNNAG-ITKDGLFVRMSDADWDTVLEVNLTAVFRLTRELTHPMMRRRHGRIINITSVVGVTGNPGQTNYCASKAGMIGFSKSLAQEIATRNITVNCVAPGFIESAM 189          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG2_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 2, chloroplastic OS=Brassica napus GN=bkr2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.271e-13
Identity = 58/195 (29.74%), Postives = 99/195 (50.77%), Query Frame = 3
Query:   60 IGKSVSRTVLITGVSRGLGRALAQELAKRGHTVI---GCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDM 632
            + K  S  V++TG SRG+G+A+A  L K G  V+     S  + +  S Q E        F   D+   + V+ + +  V+  G  D++VNNAG I ++  +  +   ++D VID N+ G+    +    +M+  ++G I+N++S  G  G    A Y A+K  V G S++ A+E     + +  + PG I +DM
Sbjct:   80 VPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEQVSKQIEAYGGQAITF-GGDVSKEADVDAMMKTAVDAWGTIDVVVNNAG-ITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDM 272          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DRS7B_BOVIN (Dehydrogenase/reductase SDR family member 7B OS=Bos taurus GN=DHRS7B PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.271e-13
Identity = 57/203 (28.08%), Postives = 95/203 (46.80%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSEL-----PNPDHHLFLNV--DIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDMLTSCFGTSAASY 668
            V+ITG + GLGR  A+     G  ++ C R  + L  L  EL     P    H    V  D+    ++   A  +++  G  D+++NNAG I+    I D SP+    V++TN  G   + +  +P MI  +QG +V +SS  G+      + Y ASK A +     +  EV    + +  ++PG I+T++  +      + Y
Sbjct:   55 VVITGATSGLGRECARVFHAAGARLVLCGRNAEALEELSQELAASRAPGVQTHKPCTVTFDLADPGAIAGAASEILQCFGHVDVLINNAG-ISYRGAIVDTSPDVDKRVMETNYFGPVALTKALLPAMIRRRQGHVVAISSIQGKISLPFRSAYAASKHATQAFFDCLRAEVEQHDIEVTVISPGYIHTNLSLNAVTADGSKY 256          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: BPHB_PSEPU (Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase OS=Pseudomonas putida GN=bphB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.271e-13
Identity = 59/196 (30.10%), Postives = 98/196 (50.00%), Query Frame = 3
Query:   66 KSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEE-----FDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSG--WGRSGAALVAPYCASKWAVEGLSRSVAKEVPDGMAIVALNPGVINTDM 632
            K     VLITG + GLGRAL          V    ++ ++L  L+++  + D+ L +  D+RS    ++ A   V K G  D ++ NAG  + +  + D+ PEE     FD V   NVKG  + ++  +P ++  +  +I  +S+   +   G  L   Y A+K AV GL R +A E+   + +  + PG IN+D+
Sbjct:    2 KLTGEVVLITGGASGLGRALVDRFVAERAKVAVLDKSAERLAQLETD--HGDNVLGVTGDVRSLEDQKQAASRCVAKFGKIDTLIPNAGIWDYSTALIDL-PEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPL---YTAAKHAVVGLVRELAFELAPYVRVNGVGPGGINSDL 191          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: YMFI_BACSU (Uncharacterized oxidoreductase ymfI OS=Bacillus subtilis GN=ymfI PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.660e-13
Identity = 56/195 (28.72%), Postives = 98/195 (50.26%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLF------LNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDML 635
            +++T LITG S G+G+++++ LA RG+ ++    T     +   EL      +F      L  D+ +    ++L   +V+     D IV N+G  +    I DV       ++  +V     + R+ +P MI  K G IV +SS WG +GA+    Y  +K A     + +AKE+ P G+ + A+ PG ++T+M+
Sbjct:    1 MNKTALITGASGGIGKSISETLAARGYNLLLHYNTNQNAAA---ELAEKLSQMFGVNAEILQADLSAQDGADKLTSSIVQPI---DAIVLNSGR-SHFGLITDVDNATVQEMVQLHVASPYMLTRNLLPGMIRNKSGAIVAVSSIWGETGASCEVLYSMAKGAQHSFVKGLAKELAPSGIRVNAVAPGAVDTNMM 188          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: YI13_SCHPO (Uncharacterized oxidoreductase C521.03 OS=Schizosaccharomyces pombe GN=SPAC521.03 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.660e-13
Identity = 53/188 (28.19%), Postives = 101/188 (53.72%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHT-VIGCSRTQDKLTSLQSELPNPDHH--LFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTD 629
            +T+LITG S G+G++ A E+AK     +I  +R    +  +  EL +      L L +D+    S+  +   + ++    D+++NNAG     +K+ D++ ++  T+I TNV G+  M R  +P+     +G I+N+ S  GR      + YC++K A+   + ++ KE  D  + I+ ++PG++ T+
Sbjct:    7 KTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVLPLKLDVSDLKSIPGVIESLPKEFADIDVLINNAGLALGTDKVIDLNIDDAVTMITTNVLGMMAMTRAVLPIFYSKNKGDILNVGSIAGRESYVGGSVYCSTKSALAQFTSALRKETIDTRIRIMEVDPGLVETE 194          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: TRN2_HYONI (Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.167e-13
Identity = 61/189 (32.28%), Postives = 99/189 (52.38%), Query Frame = 3
Query:   81 TVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNV-DIRSNSSVEELARLVVEK-KGVPDIIVNNAG-TINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDML 635
            T L+TG SRG+G  + +ELA  G +V  CSR Q +L    ++  +   ++  +V D+ S S  EE  + V     G  +I+VNNAG  I K  K  D + E++  ++  N +   ++     P +   ++G +V +SS  G S     A Y A+K A++ L+R +A E   D + +  + PGVI T M+
Sbjct:   11 TALVTGGSRGIGYGIVEELANLGASVYTCSRNQKELDECLTQWRSKGFNVEASVCDLSSRSEREEFMKTVSNHFHGKLNILVNNAGIVIYKEAK--DYTMEDYSHIMSINFEAAYHLSVLAHPFLKASERGNVVFISSISGASALPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSMV 197          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DR9C7_BOVIN (Short chain dehydrogenase/reductase family 9C member 7 OS=Bos taurus GN=SDR9C7 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.167e-13
Identity = 57/187 (30.48%), Postives = 93/187 (49.73%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDI--IVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVP-DGMAIVALNPGVINTDML 635
            V ITG   G G  LA++L  RG  V+    T++    LQ +       + L  D+    S++   + V ++ G   +  +VNNAG    +     ++ E+F  VI+ N+ G+  +  H +P M+   +G +VNMSS  GR  A +   YC SK+ VE  S S+ +E+   G+ +  + PG   T +L
Sbjct:   28 VFITGCDSGFGNLLARQLVDRGMRVLAACFTKEGAQKLQQDTSYQLQTILL--DVTKTESIKAATQWVRDQVGEQGLWALVNNAGVGLPSGPNEWLTKEDFVKVINVNLVGLIEVTLHMLP-MVKKARGRVVNMSSSGGRV-AVIGGGYCISKFGVEAFSDSIRRELHYFGVKVSIIEPGNFRTAIL 210          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: GNO_GLUOX (Gluconate 5-dehydrogenase OS=Gluconobacter oxydans GN=gno PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.831e-13
Identity = 58/184 (31.52%), Postives = 92/184 (50.00%), Query Frame = 3
Query:   87 LITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNV-DIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDM 632
            L+TG SRG+G  LA+ LA+ G  V+   R  + L S QS            V D+    +V +    +    G  DI++NNAG I +   + + S +++D ++ TNV  +  + +     MIP  +G IVN+ S         +APY A+K AV+ L++ +A +    G+ I  L PG   T+M
Sbjct:   15 LVTGASRGIGLTLAKGLARYGAEVVLNGRNAESLDSAQSGFEAEGLKASTAVFDVTDQDAVIDGVAAIERDMGPIDILINNAG-IQRRAPLEEFSRKDWDDLMSTNVNAVFFVGQAVARHMIPRGRGKIVNICSVQSELARPGIAPYTATKGAVKNLTKGMATDWGRHGLQINGLAPGYFATEM 197          
The following BLAST results are available for this feature:
BLAST of CK935676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
YB45_SCHPO1.271e-1329.38Uncharacterized oxidoreductase C30D10.05c OS=Schiz... [more]
NODG_RHIS31.271e-1330.48Nodulation protein G OS=Rhizobium sp. (strain N33)... [more]
FABG2_BRANA1.271e-1329.743-oxoacyl-[acyl-carrier-protein] reductase 2, chlo... [more]
DRS7B_BOVIN1.271e-1328.08Dehydrogenase/reductase SDR family member 7B OS=Bo... [more]
BPHB_PSEPU1.271e-1330.10Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase OS=... [more]
YMFI_BACSU1.660e-1328.72Uncharacterized oxidoreductase ymfI OS=Bacillus su... [more]
YI13_SCHPO1.660e-1328.19Uncharacterized oxidoreductase C521.03 OS=Schizosa... [more]
TRN2_HYONI2.167e-1332.28Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 P... [more]
DR9C7_BOVIN2.167e-1330.48Short chain dehydrogenase/reductase family 9C memb... [more]
GNO_GLUOX2.831e-1331.52Gluconate 5-dehydrogenase OS=Gluconobacter oxydans... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_G11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935676 ID=CK935676; Name=CK935676; organism=Citrus sinensis; type=EST; length=924bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAAATCCTGGTGTTATTAACACTGACATGCTTACGTCCTGCTTTGGC
ACTTCTGCTGCATCATACCAGCCACCTGATGCATGGGCTTTGAAGGCAGC
TACGACGATACTCAATCTTACAGGAGCAGACAATGGTGCATCTCTTACGG
TGTGACAGAAGCTTTTACATTCAAAATGCTGGGATCCAGCTAGGCGAGCG
TAACAGTTCACTGATAAAATCATATTCACTCTTCACTCATTGAATCAAAA
AGTAGAGCAGAGTGAACTNCATTCATCTTTTGTGACTTCTATGACACCTN
NNNNNCAGGAAAGCGGTTATTCTT
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