CK935676

Overview
NameCK935676
Unique NameCK935676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: BUTA_STAES (Acetoin(diacetyl) reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=butA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.831e-13
Identity = 54/190 (28.42%), Postives = 93/190 (48.95%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHH-LFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIK-QGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            +S+T +ITG + GLG+ +A+ LA  G  ++     +  L   + E     +  +    D+      EEL +  V + G  D++VNNAG ++    I ++  EE   + + NV G    ++      I  K +G I+N  S  G     ++  Y A+K +V   +++ AKE+ D G+ + A  PGV  T+M
Sbjct:    1 MSKTAIITGAAGGLGKGIAERLANDGFNIVLQDINEALLLETEKEFKEKGYQAVAYKSDVSKKKEQEELVQFAVTEFGQLDVMVNNAG-VDAVTPILEIGEEELSKLFNINVFGTLFGIQAAANQFIKQKSKGKIINACSIAGHESYEVLGTYSATKHSVRSFTQTAAKELADKGITVNAYCPGVAKTEM 189          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: ABA2_ARATH (Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.831e-13
Identity = 57/192 (29.69%), Postives = 90/192 (46.88%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSEL---PNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKN-NKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDM 632
            + +  LITG + G+G ++ +   K G  V       D    +   L    + +   F++ D+R    +       V+  G  DI++NNAG        I + S  EF+   D NVKG    ++H   +MIP K+G IV++ S  G  G      Y  SK AV GL+RSVA E+   G+ +  ++P  + T +
Sbjct:   19 LGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFFIHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQHGIRVNCVSPYAVATKL 210          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: PHAB_PARDE (Acetoacetyl-CoA reductase OS=Paracoccus denitrificans GN=phaB PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.697e-13
Identity = 58/189 (30.69%), Postives = 100/189 (52.91%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDML 635
            +++  L+TG SRG+G A+++ L + G+TV       D      +E      + +   D  + ++     + V E+ G   ++VNNAG I ++     ++P+++  VIDTN+ G+ NM       M   K G IVN+SS  G+ G A  A Y A+K    G ++++A+E    G+ + A+ PG I T+M+
Sbjct:    1 MAKVALVTGGSRGIGAAISKALKEAGYTVAANYAGNDDAARAFTEETGIKTYKWSVADYDACAAG---IKQVEEELGPIAVLVNNAG-ITRDAMFHKMTPQQWKEVIDTNLTGLFNMTHPVWSGMRDRKYGRIVNISSINGQKGQAGQANYSAAKAGDLGFTKALAQEGARAGITVNAICPGYIGTEMV 185          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: BUTA_STAEQ (Acetoin(diacetyl) reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=butA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.697e-13
Identity = 54/190 (28.42%), Postives = 93/190 (48.95%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHH-LFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIK-QGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            +S+T +ITG + GLG+ +A+ LA  G  ++     +  L   + E     +  +    D+      EEL +  V + G  D++VNNAG ++    I ++  EE   + + NV G    ++      I  K +G I+N  S  G     ++  Y A+K +V   +++ AKE+ D G+ + A  PGV  T+M
Sbjct:    1 MSKTAIITGSAGGLGKGIAERLANDGFNIVLQDINEALLLETEKEFKEKGYQAVAFKSDVSKKKEQEELVQFAVTEFGQLDVMVNNAG-VDAVTPILEIGEEELSKLFNINVFGTLFGIQAAANQFIKQKSKGKIINACSIAGHESYEVLGTYSATKHSVRSFTQTAAKELADKGITVNAYCPGVAKTEM 189          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: PHAB_ACISR (Acetoacetyl-CoA reductase OS=Acinetobacter sp. (strain RA3849) GN=phaB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.829e-13
Identity = 56/195 (28.72%), Postives = 98/195 (50.26%), Query Frame = 3
Query:   69 SVSRTVLITGVSRGLGRALAQELAKRGHTVIGC--SRTQDKLTS-LQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDMLTS 641
            S  +  L+TG   G+G  + ++L   G+ +I     R +D+    LQSE        F+  D+ ++ +     +  +  +G  D++VNNAG I ++     +S E++  VIDTN+K +  + +     M+  K G IVN+SS  G  G    A Y ASK  + G ++++A+E     + +  + PG   T M+T+
Sbjct:    2 SEQKVALVTGALGGIGSEICRQLVTAGYKIIATVVPREEDREKQWLQSEGFQDSDVRFVLTDLNNHEAATAAIQEAIAAEGRVDVLVNNAG-ITRDATFKKMSYEQWSQVIDTNLKTLFTVTQPVFNKMLEQKSGRIVNISSVNGLKGQFGQANYSASKAGIIGFTKALAQEGARSNICVNVVAPGYTATPMVTA 195          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_AGGAC (3-oxoacyl-[acyl-carrier-protein] reductase OS=Aggregatibacter actinomycetemcomitans GN=fabG PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.829e-13
Identity = 62/195 (31.79%), Postives = 103/195 (52.82%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRG-HTVIGC-SRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPI----KQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDML 635
            +S T+LITG SRG+G+A+A  LA+ G   V+ C SR ++     Q+      +   L  D+   S   +     VE  G    +V NAG + ++N    ++ E++D V+ TN+ G  N+L    P+M+P+    K G IV ++S  G  G      Y ASK  + G ++++A E+    + +  + PG+I+TD+L
Sbjct:    1 MSETILITGSSRGIGKAIALRLAQAGFDIVVHCRSRIEEAEAVAQAVRELGQNARVLQFDVSCRSEAADKLTADVEAHGAYYGVVLNAG-LTRDNAFPALTDEDWDRVLRTNLDGFYNVLH---PIMMPMIRRRKAGRIVCITSVSGLIGNRGQVNYSASKAGIIGAAKALAVELAKRKITVNCVAPGLIDTDIL 191          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG4_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 4 (Fragment) OS=Brassica napus GN=bkr4 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.829e-13
Identity = 52/194 (26.80%), Postives = 99/194 (51.03%), Query Frame = 3
Query:   60 IGKSVSRTVLITGVSRGLGRALAQELAKRG-HTVIGCSRTQDKLTSLQSELPN-PDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDM 632
            + K  S  V++TG SRG+G+A+A  L K G   ++  +R+  +   +  ++       +    D+   + V+ + +  V+K G  D++VNNAG    +  +  +   ++D V+D N+ G+    +    +M+  ++G I+N++S  G  G    A Y A+K  V G S++ A+E     + +  + PG I +DM
Sbjct:    9 VPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEEYGGQAITFGGDVSKEADVDAMMKTAVDKWGTIDVVVNNAG----DTLLIRMKKSQWDEVMDLNLTGVFLCSQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDM 198          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DR9C7_MOUSE (Short chain dehydrogenase/reductase family 9C member 7 OS=Mus musculus GN=Sdr9c7 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.829e-13
Identity = 61/189 (32.28%), Postives = 99/189 (52.38%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHL--FLNVDIRSNSSVEELARLVVEKKGVPDI--IVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVP-DGMAIVALNPGVINTDML 635
            V ITG   G G  LA++L  RG  V+    T++     Q  L +  H L  FL +D+  + +V+E A+ V ++ G   +  +VNNAG    +     ++ ++F  VI+ N+ G+ ++  + +P MI   +G +VNMSS  GR  A     YC SK+ VE  S S+ +E+   G+ +  + PG   T +L
Sbjct:   28 VFITGCDSGFGNLLAKQLVDRGMKVLAACLTEE---GAQKLLQDTSHQLQTFL-LDVTKSENVKEAAQWVRDQVGEQGLWALVNNAGVGLPSGPNEWLTIKDFVKVININLVGLIDVTLNMLP-MIKKARGRVVNMSSSGGRV-AIFGGGYCVSKFGVEAFSDSIRRELHFFGVKVSIIEPGNYKTSIL 210          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: Y1627_STAS1 (Uncharacterized oxidoreductase SSP1627 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1627 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.306e-13
Identity = 51/193 (26.42%), Postives = 93/193 (48.19%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGT-----INKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE---VPDGMAIVALNPGVINTDM 632
            + V+ITG S G+G      L++ G  ++  +R  D+L  +Q ++ + D       D+     V  L        G  D+++NNAG      + KN +      +E++ +ID N+KG+   +   +P M   K G I+N++S  G       A YC +K+AV  ++  + +E   V   +    L+PG ++T++
Sbjct:    7 KVVVITGASSGIGEETVNLLSENGAKLVLGARRLDRLEKIQQKVGH-DSVSIKKTDVTKPDEVNALIETAYNDFGRIDVLINNAGLMPQSFLEKNKQ------DEWNQMIDVNIKGVLYGIGAVLPYMRKQKSGHIINLASVAGHVVFPGSAVYCGTKYAVRAITEGLRQEEAIVGSNIRTTILSPGAVSTEL 192          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: NODG_RHIME (Nodulation protein G OS=Rhizobium meliloti GN=nodG PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.306e-13
Identity = 59/188 (31.38%), Postives = 99/188 (52.66%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQ-DKLTSLQSELPNPDHHLFLNVDIRSNSSVEELA-RLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            R  L+TG S  +G A+A+ L  +G  ++G   TQ +KL +L +EL   D       ++ +   V+ L  R   + +GV DI+VNNAG I K+     ++  ++D V++ N+  +  + R     MI  + G I+N++S  G  G      YCASK  + G S+S+A+E+    + +  + PG I + M
Sbjct:    7 RKALVTGASGAIGGAIARVLHAQG-AIVGLHGTQIEKLETLATELG--DRVKLFPANLANRDEVKALGQRAEADLEGV-DILVNNAG-ITKDGLFLHMADPDWDIVLEVNLTAMFRLTREITQQMIRRRNGRIINVTSVAGAIGNPGQTNYCASKAGMIGFSKSLAQEIATRNITVNCVAPGFIESAM 189          
The following BLAST results are available for this feature:
BLAST of CK935676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
BUTA_STAES2.831e-1328.42Acetoin(diacetyl) reductase OS=Staphylococcus epid... [more]
ABA2_ARATH2.831e-1329.69Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN... [more]
PHAB_PARDE3.697e-1330.69Acetoacetyl-CoA reductase OS=Paracoccus denitrific... [more]
BUTA_STAEQ3.697e-1328.42Acetoin(diacetyl) reductase OS=Staphylococcus epid... [more]
PHAB_ACISR4.829e-1328.72Acetoacetyl-CoA reductase OS=Acinetobacter sp. (st... [more]
FABG_AGGAC4.829e-1331.793-oxoacyl-[acyl-carrier-protein] reductase OS=Aggr... [more]
FABG4_BRANA4.829e-1326.803-oxoacyl-[acyl-carrier-protein] reductase 4 (Frag... [more]
DR9C7_MOUSE4.829e-1332.28Short chain dehydrogenase/reductase family 9C memb... [more]
Y1627_STAS16.306e-1326.42Uncharacterized oxidoreductase SSP1627 OS=Staphylo... [more]
NODG_RHIME6.306e-1331.38Nodulation protein G OS=Rhizobium meliloti GN=nodG... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_G11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935676 ID=CK935676; Name=CK935676; organism=Citrus sinensis; type=EST; length=924bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAAATCCTGGTGTTATTAACACTGACATGCTTACGTCCTGCTTTGGC
ACTTCTGCTGCATCATACCAGCCACCTGATGCATGGGCTTTGAAGGCAGC
TACGACGATACTCAATCTTACAGGAGCAGACAATGGTGCATCTCTTACGG
TGTGACAGAAGCTTTTACATTCAAAATGCTGGGATCCAGCTAGGCGAGCG
TAACAGTTCACTGATAAAATCATATTCACTCTTCACTCATTGAATCAAAA
AGTAGAGCAGAGTGAACTNCATTCATCTTTTGTGACTTCTATGACACCTN
NNNNNCAGGAAAGCGGTTATTCTT
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