CK935676

Overview
NameCK935676
Unique NameCK935676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DRS7B_XENLA (Dehydrogenase/reductase SDR family member 7B OS=Xenopus laevis GN=dhrs7b PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.076e-12
Identity = 56/204 (27.45%), Postives = 95/204 (46.57%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPN--------PDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDMLTSCFGTSAASY 668
            V+ITG + GLG+  A+     G  ++ C R +++L  L  EL N           H+ +  D+    +V   A+ ++   G  DI++NNAG I+    I D        V+DTN  G   + +  +P MI  ++G +V +SS  G+      + Y ASK A +     +  E+ P  + +  +NPG I T++  +      + Y
Sbjct:   39 VVITGATSGLGKECAKVFYAAGSHLVLCGRDEERLKDLVQELNNMRLKSTQLHKPHMVI-FDLSDVEAVNTAAKEILHLAGRVDILINNAG-ISYRGTILDTKVSVDRMVMDTNYFGPVALTKALLPSMIKNRRGHVVVISSVQGKISIPFRSAYSASKHATQAFFDCLRAEMSPYDIDVTVVNPGYIKTNLSLNAVTGDGSGY 240          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: BPHB_BURXL (Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase OS=Burkholderia xenovorans (strain LB400) GN=bphB PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.076e-12
Identity = 57/196 (29.08%), Postives = 98/196 (50.00%), Query Frame = 3
Query:   66 KSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEE-----FDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSG--WGRSGAALVAPYCASKWAVEGLSRSVAKEVPDGMAIVALNPGVINTDM 632
            K     VLITG + GLGRAL       G  V    ++ ++L  L+++  + D+ L +  D+RS    ++ A   V + G  D ++ NAG  + +  + D+ PEE     FD V   NVKG  + ++  +P ++  +  +I  +S+   +   G  L   Y A+K A+ GL R +A E+   + +  +  G IN+D+
Sbjct:    2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETD--HGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDL-PEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPL---YTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDL 191          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: BDH_HUMAN (D-beta-hydroxybutyrate dehydrogenase, mitochondrial OS=Homo sapiens GN=BDH1 PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 1.076e-12
Identity = 58/187 (31.02%), Postives = 93/187 (49.73%), Query Frame = 3
Query:   75 SRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELP--NPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDI----IVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPG 614
            S+ VL+TG   G G +LA+ L  +G  V      +DK      EL   N D    + +++ S+  VE++  +V      P+     +VNNAG I+   ++   S E +  V + N+ G   M + F+PL+   K G +VN+SS  GR      +PYC +K+ VE  S  +  E+ P G+ +  + PG
Sbjct:   55 SKAVLVTGCDSGFGFSLAKHLHSKGFLVFAGCLMKDKGHDGVKELDSLNSDRLRTVQLNVCSSEEVEKVVEIVRSSLKDPEKGMWGLVNNAG-ISTFGEVEFTSLETYKQVAEVNLWGTVRMTKSFLPLIRRAK-GRVVNISSMLGRMANPARSPYCITKFGVEAFSDCLRYEMYPLGVKVSVVEPG 239          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: HCDR_XANP2 (2-(R)-hydroxypropyl-CoM dehydrogenase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=xecD PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 1.405e-12
Identity = 65/197 (32.99%), Postives = 95/197 (48.22%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKL--TSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAG-TINKNNKIWDVSP-EEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVA-----PYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDM 632
            +SR  ++TG S G G A+A     RG  V     + + L  T+        D  L +  D+     V       +E+ G  D++VNNAG T N    +   +P E+FD V+  NV+GI    R  +P M+    G+IVN++     S A+LVA      Y  SK AV  L++SVA +    G+   A+ PG+I T M
Sbjct:    1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIA-----SVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPM 192          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DRS7B_XENTR (Dehydrogenase/reductase SDR family member 7B OS=Xenopus tropicalis GN=dhrs7b PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.405e-12
Identity = 58/204 (28.43%), Postives = 95/204 (46.57%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPN--------PDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDMLTSCFGTSAASY 668
            V+ITG + GLGR  A+     G  ++ C R+++ L +L  EL             H+ +  D+    +V   A  ++   G  DI++NNAG I+    I D        V+DTN  G   + +  IP MI  ++G IV +SS  G+      + Y ASK A +     +  E+ P  + +  +NPG I T++  +      ++Y
Sbjct:   39 VVITGATSGLGRECAKVFYAAGTRLVLCGRSEEGLKNLVQELSQMRIKSAQLHKPHMVI-FDLSDVEAVNSAANEILHLTGRVDILINNAG-ISYRGTILDTKVSVDRMVMDTNYFGPVALTKALIPSMIKNRRGHIVVISSVQGKISIPFRSAYSASKHATQAFFDCLRAEMSPYEIDVTVVNPGYIKTNLSLNAVTGDGSNY 240          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DHB13_MOUSE (17-beta hydroxysteroid dehydrogenase 13 OS=Mus musculus GN=Hsd17b13 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.405e-12
Identity = 59/199 (29.65%), Postives = 94/199 (47.24%), Query Frame = 3
Query:   66 KSVS-RTVLITGVSRGLGRALAQELAKRGHTVI-------GCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV----PDGMAIVALNPGVINT 626
            KSV+ +TVLITG   G+GR  A E AK+   ++       G   T DK   L + +     H+F+ VD  + + +      V  + G  +I+VNNAG I   + +     EE     + N+ G   +++  +P M+    G IV ++S  G      + PYC+SK+A  G  R++  E+      G+    L P  +NT
Sbjct:   32 KSVTGQTVLITGAGHGIGRLTAYEFAKQKSRLVLWDINKRGVEETADKCRKLGAVV-----HVFV-VDCSNRAEIYNSVDQVKREVGDVEIVVNNAGAIYPADLL-SAKDEEITKTFEVNILGHFWIIKALLPSMLRRNSGHIVTVASVCGHGVIPYLIPYCSSKFAAVGFHRALTAELDTLGKTGIKTSCLCPVFVNT 223          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: BUDC_KLEPN (Acetoin(diacetyl) reductase OS=Klebsiella pneumoniae GN=budC PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.405e-12
Identity = 54/190 (28.42%), Postives = 92/190 (48.42%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNP-DHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQ-GIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDM 632
            + +  L+TG  +G+G+A+A  L K G  V           ++ SE+       + + VD+     V        +  G  D+IVNNAG +  +  I  ++PE  D V + NVKG+   ++  +         G I+N  S  G  G   +A Y +SK+AV GL+++ A+++ P G+ +    PG++ T M
Sbjct:    1 MKKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGRAMAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAG-VAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM 189          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: PHBB_RHIME (Acetoacetyl-CoA reductase OS=Rhizobium meliloti GN=phbB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.835e-12
Identity = 61/191 (31.94%), Postives = 100/191 (52.36%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTV-IGCSRTQDKLTSLQSELPNPDHHLFLNVDIRS-NSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDML 635
            +SR  L+TG SRG+G A+   L   G+ V    +   ++  + + E   P +      D+ S  + V+ +AR+  +  G  DI+VNNAG I ++     ++PE++  VI TN+ G+ NM       M     G IVN+SS  G+ G      Y A+K    GL++++A+E    G+ + A+ PG I T+M+
Sbjct:    1 MSRVALVTGGSRGIGAAICVALKAAGYKVAANYAGNDERAKAFEQESGIPVY----KWDVSSYQACVDGIARVEAD-LGPVDILVNNAG-ITRDAMFHKMTPEQWGEVIGTNLTGVFNMTHPLWSGMRDRGFGRIVNISSINGQKGQMGQVNYSAAKAGDLGLTKALAQEGAAKGITVNAICPGYIGTEMV 185          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DCXR_CAEEL (Probable L-xylulose reductase OS=Caenorhabditis elegans GN=dhs-21 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.835e-12
Identity = 62/191 (32.46%), Postives = 102/191 (53.40%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNV-DIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKG---IANML-RHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDM 632
            + +L+TG S+G+G+ +   LAK G  VI  +R +  L SL  E  +  + +   V D+ +N  V  L +L+V    +   +VNNAG I  N+ I  ++ +  D     NV+G   IA ++ R+F+   I   +G IVN+SS            YCASK A++ ++R +A E+    + + ++NP V+ TDM
Sbjct:   10 KRILVTGASQGIGKEICLSLAKAGAQVIAFARNEANLLSLVKETTSLRYTIIPIVGDVSANEEV--LFKLIVPHFPIHG-LVNNAG-IATNHAIGQITQQSIDRTFAVNVRGPILIAQLVARNFVDRQI---KGSIVNISSQAAIRPLDNHTVYCASKAALDMVTRCLANELGSQNIRVNSVNPTVVMTDM 193          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: Y484_MYCTU (Uncharacterized oxidoreductase Rv0484c/MT0502 OS=Mycobacterium tuberculosis GN=Rv0484c PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.396e-12
Identity = 53/185 (28.65%), Postives = 92/185 (49.73%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTD 629
            R  ++TG S G+G A A+ LA +G  V+  +R  D++T+L +++        +  D+  +++VE LAR +       D++VNNAG       + D   E +  + DTNV G   + R  +P +I    G+IV ++S          A Y A+K A   L R++  E +   + +  + PG + T+
Sbjct:    9 RVAVVTGASSGIGEATARTLAAQGFHVVAVARRADRITALANQIGG----TAIVADVTDDAAVEALARALSR----VDVLVNNAGGAKGLQFVADADLEHWRWMWDTNVLGTLRVTRALLPKLIDSGDGLIVTVTSIAAIEVYDGGAGYTAAKHAQGALHRTLRGELLGKPVRLTEIAPGAVETE 185          
The following BLAST results are available for this feature:
BLAST of CK935676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
DRS7B_XENLA1.076e-1227.45Dehydrogenase/reductase SDR family member 7B OS=Xe... [more]
BPHB_BURXL1.076e-1229.08Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase OS=... [more]
BDH_HUMAN1.076e-1231.02D-beta-hydroxybutyrate dehydrogenase, mitochondria... [more]
HCDR_XANP21.405e-1232.992-(R)-hydroxypropyl-CoM dehydrogenase OS=Xanthobac... [more]
DRS7B_XENTR1.405e-1228.43Dehydrogenase/reductase SDR family member 7B OS=Xe... [more]
DHB13_MOUSE1.405e-1229.6517-beta hydroxysteroid dehydrogenase 13 OS=Mus mus... [more]
BUDC_KLEPN1.405e-1228.42Acetoin(diacetyl) reductase OS=Klebsiella pneumoni... [more]
PHBB_RHIME1.835e-1231.94Acetoacetyl-CoA reductase OS=Rhizobium meliloti GN... [more]
DCXR_CAEEL1.835e-1232.46Probable L-xylulose reductase OS=Caenorhabditis el... [more]
Y484_MYCTU2.396e-1228.65Uncharacterized oxidoreductase Rv0484c/MT0502 OS=M... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_G11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935676 ID=CK935676; Name=CK935676; organism=Citrus sinensis; type=EST; length=924bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAAATCCTGGTGTTATTAACACTGACATGCTTACGTCCTGCTTTGGC
ACTTCTGCTGCATCATACCAGCCACCTGATGCATGGGCTTTGAAGGCAGC
TACGACGATACTCAATCTTACAGGAGCAGACAATGGTGCATCTCTTACGG
TGTGACAGAAGCTTTTACATTCAAAATGCTGGGATCCAGCTAGGCGAGCG
TAACAGTTCACTGATAAAATCATATTCACTCTTCACTCATTGAATCAAAA
AGTAGAGCAGAGTGAACTNCATTCATCTTTTGTGACTTCTATGACACCTN
NNNNNCAGGAAAGCGGTTATTCTT
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