CK935676

Overview
NameCK935676
Unique NameCK935676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: PGDH_BOVIN (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Bos taurus GN=HPGD PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.339e-12
Identity = 59/195 (30.26%), Postives = 92/195 (47.18%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQD---KLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPE-EFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE---VPDGMAIVALNPGVINTDMLTS 641
            +  L+TG ++G+GRA A+ L  +G  V       +   K  +   E   P   LF+  D+     + +  R VV+  G  DI+VNNAG  N+ N  W+ + +    +VI     G+  M +         + GI +NMSS  G    A    YCASK  + G +RS A     +  G+ + A+ PG ++T +L S
Sbjct:    6 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVKCKAALDEQFEPQKTLFIQCDVADQEQLRDTFRKVVDHFGKLDILVNNAGVNNEKN--WEKTLQINLVSVISGTYLGLDYMSK-----QNGGEGGININMSSLAGLMPVAQQPVYCASKHGIVGFTRSAAMAANLMNSGVRLNAICPGFVDTPILKS 193          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FOX2_CANTR (Peroxisomal hydratase-dehydrogenase-epimerase OS=Candida tropicalis PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 5.339e-12
Identity = 60/195 (30.77%), Postives = 99/195 (50.77%), Query Frame = 3
Query:   21 TITTMAATTPFNGIGKSVS-----RTVLITGVSRGLGRALAQELAKRGHTVI-----GCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE 575
            T+T  A   P N    + +     + VLITG   GLG+  A+  AK G  V+       ++T D++ +   E   PD H     D+  +S  E + + V++K G  DI+VNNAG + ++     +S +E+D+V   ++ G  N+ R   P  +  + G I+N++S  G  G    A Y +SK  + GLS+++A E
Sbjct:  299 TLTNEARKLPANDASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAW-PDQH-----DVAKDS--EAIIKNVIDKYGTIDILVNNAGIL-RDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIE 484          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG2_SYNY3 (3-oxoacyl-[acyl-carrier-protein] reductase 2 OS=Synechocystis sp. (strain PCC 6803) GN=fabG2 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.339e-12
Identity = 57/186 (30.65%), Postives = 97/186 (52.15%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDM 632
            + +++TG +RG+G A+ + L + G  V          T L ++  N +  L +  ++    S+   A  + +K G    +V NAG I K+N    ++P ++D V++ N+KG+A  ++ FI  M   K G IV +SS  G  G      Y A+K  V G+ +S+A+E    G+   A+ PG I+T+M
Sbjct:    9 KVIVVTGGNRGIGAAIVKLLQEMGAKVA--------FTDLATDGGNTEA-LGVVANVTDLESMTAAAAEITDKLGPVYGVVANAG-ITKDNFFPKLTPADWDAVLNVNLKGVAYSIKPFIEGMYERKAGSIVAISSISGERGNVGQTNYSATKAGVIGMMKSLAREGARYGVRANAVAPGFIDTEM 184          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DRS7B_DANRE (Dehydrogenase/reductase SDR family member 7B OS=Danio rerio GN=dhrs7b PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.339e-12
Identity = 56/205 (27.32%), Postives = 94/205 (45.85%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDH-------HLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDMLTSCFGTSAASY 668
            + V+ITG S GLG+  A+     G  +I C R Q +L  +  EL N  +          +  D+ + S V   A  ++++ G  D+++N AG   + N I D        V++TN  G   + +  +P M+    G IV +SS  G+      + Y ASK A++     +  EV   G+ +  L+PG + T+M  +      + Y
Sbjct:   38 KVVVITGASSGLGKECARVFHAAGARLILCGRDQRRLQEVVEELGNKTYGKTKTYTPCTVTFDLSNTSVVCSAAAEILKRHGHVDVLINIAGVSYRGN-ILDTHVSVQREVMETNYFGPVALTQAILPSMVDRGSGHIVVISSVQGKISIPYRSAYAASKHAMQAYYDCLRAEVDSLGLHVSVLSPGYVRTNMSINAVTGDGSKY 241          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DHBA_BACSU (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase OS=Bacillus subtilis GN=dhbA PE=1 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 5.339e-12
Identity = 51/200 (25.50%), Postives = 92/200 (46.00%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHL-FLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDMLTSCFGTSAASYQ 671
            +   ITG ++G+G A+A+ LA +G  +       +KL  + S L     H      D+R +++++E+   +  + G  DI+VN AG + +   I  +S EE++     N  G+ N  R     M+  + G IV + S         +A Y +SK A    ++ +  E+ +  +    ++PG   TDM  S +     + Q
Sbjct:    9 KIAFITGAAQGIGEAVARTLASQGAHIAAVDYNPEKLEKVVSSLKAEGRHAEAFPADVRDSAAIDEITARIEREMGPIDILVNVAGVL-RPGLIHSLSDEEWEATFSVNSTGVFNASRSVSKYMMDRRSGSIVTVGSNAAGVPRTSMAAYASSKAAAVMFTKCLGLELAEYNIRCNIVSPGSTETDMQWSLWADENGAEQ 207          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: CBR4_HUMAN (Carbonyl reductase family member 4 OS=Homo sapiens GN=CBR4 PE=1 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 5.339e-12
Identity = 53/188 (28.19%), Postives = 95/188 (50.53%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVP-DGMAIVALNPGVINTDM 632
            + +   + G SRG+GRA+AQ +A++G+ +   +R  +   +   +L     HL  + D+     V+     + +  G  + +VN AG IN++  +     E+  + + TN+ G     +  +  MI  + G IVN+ S  G  G +  + Y ASK  + G SR++AKEV    + +  + PG ++TDM
Sbjct:    1 MDKVCAVFGGSRGIGRAVAQLMARKGYRLAVIARNLEGAKAAAGDLGGD--HLAFSCDVAKEHDVQNTFEELEKHLGRVNFLVNAAG-INRDGLLVRTKTEDMVSQLHTNLLGSMLTCKAAMRTMIQQQGGSIVNVGSIVGLKGNSGQSVYSASKGGLVGFSRALAKEVARKKIRVNVVAPGFVHTDM 185          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: YHDF_BACSU (Uncharacterized oxidoreductase yhdF OS=Bacillus subtilis GN=yhdF PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.973e-12
Identity = 53/203 (26.11%), Postives = 98/203 (48.28%), Query Frame = 3
Query:   51 FNGIGKSVSRTVLITGVSRGLGRALAQELAKRGH--TVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQG-IIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDMLTSCF 647
            + G GK   +  +ITG   G+GRA A   AK G   +++      D   + +         L +  D+   +  E+  +  V+  G  DI+VNNA   +  + I ++S E+ +    TN+  + +M +  +P    +++G  I+N +S     G   +  Y ++K A+   +RS+AK + D G+ + A+ PG I T ++ + F
Sbjct:   37 YRGSGKLKGKVAIITGGDSGIGRAAAIAFAKEGADISILYLDEHSDAEETRKRIEKENVRCLLIPGDVGDENHCEQAVQQTVDHFGKLDILVNNAAEQHPQDSILNISTEQLEKTFRTNIFSMFHMTKKALP---HLQEGCAIINTTSITAYEGDTALIDYSSTKGAIVSFTRSMAKSLADKGIRVNAVAPGPIWTPLIPATF 236          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: TRNH_DATST (Tropinone reductase homolog OS=Datura stramonium PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.973e-12
Identity = 57/188 (30.32%), Postives = 94/188 (50.00%), Query Frame = 3
Query:   81 TVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNV-DIRSNSSVEELARLVVEK-KGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDML 635
            T L+TG +RG+G A+ +ELA  G  V  CSR+Q+ L     +       +   V D+ S S  + L   V     G  +I++NNAGT     +  + + E++  ++ TN +   N+ +   PL+       IV  SS  G     L + Y ASK A+  +++S+A E   D + + A+ P +INT ++
Sbjct:   19 TALVTGGTRGIGYAIVEELANFGAEVYTCSRSQNDLDECLEKWRRKGFKVSGPVCDVSSISQRQTLMESVTSSFNGKLNILINNAGT-TIPKEATNFTAEDYSIIMGTNFEASYNLCQLAHPLLKASGNASIVFNSSAAGVIAVPLSSIYAASKGAINQVTKSLACEWAKDSIRVNAVAPWIINTPII 205          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DHRS1_MOUSE (Dehydrogenase/reductase SDR family member 1 OS=Mus musculus GN=Dhrs1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.973e-12
Identity = 62/192 (32.29%), Postives = 95/192 (49.48%), Query Frame = 3
Query:   87 LITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNV-DIRSNSSVEELARLV-VEKKGVPDIIVNNA-----GTINKNNK-IWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDML 635
            ++TG SRG+GR +A +L K G TV    R  D L +   E  +        V D    S V+ L   V  E+KG  D++VNNA       +N  NK  W+V    +D + +  ++G      +   LM+P  +G+IV +SS  G      V PY   K A + L+   A E+   G++ V+L PG++ T+M+
Sbjct:   11 VVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRATAQEAQSLGGRCVPVVCDSSQESEVKSLFEQVDREQKGRLDVLVNNAYAGVQAILNTTNKSFWEVPASIWDDINNVGLRGHYLCSVYGARLMVPAGKGLIVIVSSPGGLQHMFNV-PYGVGKAACDRLAADCAHELRRHGVSYVSLWPGLVQTEMV 201          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: YUSZ_BACSU (Uncharacterized oxidoreductase yusZ OS=Bacillus subtilis GN=yusZ PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 9.106e-12
Identity = 60/201 (29.85%), Postives = 98/201 (48.76%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQ--SELPNPDHHLFLN-VDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDMLTSCFGTSAASY 668
            +  ++TG S G G   A +LA R   VI  SR  +K   L+  +   N    + +  +D+    S+    + V     + D++VNNAGT      I DV  E F    +TNV G+ ++ +  +P +       I+N+SS  G +G   ++PY +SK A+EG S S+  E +P G+    + PG       TS + TS +++
Sbjct:    4 KIAIVTGASSGFGLLAAVKLA-RSFFVIATSRQPEKAEQLRELAAAHNVSDSIHITALDVTDEQSIVSFGKAVSAYAPI-DLLVNNAGTAY-GGFIEDVPMEHFRQQFETNVFGVIHVTKTVLPYIRKHGGAKIINVSSISGLTGFPALSPYVSSKHALEGFSESLRIELLPFGIETALIEPG----SYKTSIWSTSLSNF 197          
The following BLAST results are available for this feature:
BLAST of CK935676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
PGDH_BOVIN5.339e-1230.2615-hydroxyprostaglandin dehydrogenase [NAD+] OS=Bo... [more]
FOX2_CANTR5.339e-1230.77Peroxisomal hydratase-dehydrogenase-epimerase OS=C... [more]
FABG2_SYNY35.339e-1230.653-oxoacyl-[acyl-carrier-protein] reductase 2 OS=Sy... [more]
DRS7B_DANRE5.339e-1227.32Dehydrogenase/reductase SDR family member 7B OS=Da... [more]
DHBA_BACSU5.339e-1225.502,3-dihydro-2,3-dihydroxybenzoate dehydrogenase OS... [more]
CBR4_HUMAN5.339e-1228.19Carbonyl reductase family member 4 OS=Homo sapiens... [more]
YHDF_BACSU6.973e-1226.11Uncharacterized oxidoreductase yhdF OS=Bacillus su... [more]
TRNH_DATST6.973e-1230.32Tropinone reductase homolog OS=Datura stramonium P... [more]
DHRS1_MOUSE6.973e-1232.29Dehydrogenase/reductase SDR family member 1 OS=Mus... [more]
YUSZ_BACSU9.106e-1229.85Uncharacterized oxidoreductase yusZ OS=Bacillus su... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_G11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935676 ID=CK935676; Name=CK935676; organism=Citrus sinensis; type=EST; length=924bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAAATCCTGGTGTTATTAACACTGACATGCTTACGTCCTGCTTTGGC
ACTTCTGCTGCATCATACCAGCCACCTGATGCATGGGCTTTGAAGGCAGC
TACGACGATACTCAATCTTACAGGAGCAGACAATGGTGCATCTCTTACGG
TGTGACAGAAGCTTTTACATTCAAAATGCTGGGATCCAGCTAGGCGAGCG
TAACAGTTCACTGATAAAATCATATTCACTCTTCACTCATTGAATCAAAA
AGTAGAGCAGAGTGAACTNCATTCATCTTTTGTGACTTCTATGACACCTN
NNNNNCAGGAAAGCGGTTATTCTT
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