CK935676

Overview
NameCK935676
Unique NameCK935676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: Y4EK_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4eK OS=Rhizobium sp. (strain NGR234) GN=NGR_a03840 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.106e-12
Identity = 53/193 (27.46%), Postives = 93/193 (48.19%), Query Frame = 3
Query:   87 LITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDMLTSCFGTSAA 662
            L+TG S G+G+A+A ELA  G  V+   R +  L  L S          +   +   S V E+   +  +K   D++VNNAG +  +  + D+S ++ D +ID N++ +  + RH +  MI  ++G I    S  G +     + Y A+K AV   S ++  + +   + +  L PG + T++  +  G   A
Sbjct:   11 LVTGASSGIGKAIALELASAGLRVLALGRDRAALDELHSTAG-------IVPVVFDLSDVSEVYGKIAGEK--IDVLVNNAGLLTASASLVDLSEDDIDAMIDINIRSVFKLTRHVLKQMIERRRGHIFFTGSSGGLAPHPNSSVYGATKAAVSLFSSALRCDLIGLPIRVTELFPGRVETNLYRTALGKEGA 194          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: STCU_EMENI (Versicolorin reductase OS=Emericella nidulans GN=stcU PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 9.106e-12
Identity = 56/193 (29.02%), Postives = 95/193 (49.22%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRG-HTVIGCSRTQDKLTSLQSEL-PNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQG--IIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDMLTS 641
            +  L+TG  RG+G A+A  L +RG   V+  + +++    +  E+  N    + +  D+    +V +L    VE  G  DI+ +NAG ++  + + DV+P+EFD V   N +G   + R        +++G  II+  S+     G    A Y  SK A++   R +A +  D  + + A+ PG I TDM  S
Sbjct:   12 KVALVTGAGRGIGAAIAVALGQRGAKVVVNYANSREAAEKVVDEIKSNGSDAISIQADVGDPDAVTKLMDQAVEHFGYLDIVSSNAGIVSFGH-VKDVTPDEFDRVFRVNTRGQFFVARE---AYRHLREGGRIILTSSNTASVKGVPRHAVYSGSKGAIDTFVRCLAIDCGDKKITVNAVAPGAIKTDMFLS 200          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: NODG_AZOBR (Nodulation protein G OS=Azospirillum brasilense GN=nodG PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 9.106e-12
Identity = 56/189 (29.63%), Postives = 90/189 (47.62%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIG-CSRTQDKLTSLQSELPNPDHHLFL-NVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDML 635
            +  L+TG   GLG A+ Q LAK G  V   C    +   +   +        ++   D+    S + +   +    G  DI+VNNAG I ++     +   ++D VI TN+  + N+ +   P M     G I+N+SS  G  G A    Y A+K  V G ++++A E+   G+ + A+ PG I TDM+
Sbjct:    4 KIALVTGAMGGLGTAICQALAKDGCIVAANCLPNFEPAAAWLGQQEALGFKFYVAEGDVSDFESCKAMVAKIEADLGPVDILVNNAG-ITRDKFFAKMDKAQWDAVIATNLSSLFNVTQQVSPKMAERGWGRIINISSVNGVKGQAGQTNYSAAKAGVIGFTKALAAELATKGVTVNAIAPGYIGTDMV 191          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: CBR4_XENLA (Carbonyl reductase family member 4 OS=Xenopus laevis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.106e-12
Identity = 54/188 (28.72%), Postives = 97/188 (51.60%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            +S+   + G SRG+G+A+A+ LA++ + V   SR  +   +  +E+     HL L+ D+   + ++   + +    G  D +VN+AG I+++  +     E+  +++  N+ G     +  +  MI  + G IVN+ S  G  G    + Y ASK  + G S+S+AKEV    + +  + PG I TDM
Sbjct:    1 MSKVCAVFGGSRGIGKAVAKLLAQKDYKVAVISRNLEVAQAAVTEI---GAHLALSCDVSKENEIQCTFKEIKNNLGNIDYLVNSAG-ISRDALLLRTRSEDIMSLLSINLVGTIQTCKVALKGMIQQQGGSIVNIGSIVGHKGNIGQSIYGASKEGLIGFSKSLAKEVAKRNIRVNVVAPGFIRTDM 184          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: CBR4_MOUSE (Carbonyl reductase family member 4 OS=Mus musculus GN=Cbr4 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 9.106e-12
Identity = 56/188 (29.79%), Postives = 94/188 (50.00%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVP-DGMAIVALNPGVINTDM 632
            + +   + G SRG+GRA+AQ +A++G+ +   SR  +       EL    +HL    D+     V+   + + +  G  + +VN AG IN+++ +     E+  + + TN+ G     +  +  MI  + G IVN+ S  G  G    + Y A+K  + G SRS+AKEV    + +  + PG I TDM
Sbjct:    1 MDKVCAVFGGSRGIGRAVAQLMAQKGYRLAIVSRNLEVAKVTAGELGG--NHLAFRCDVAKEQDVQSTFQEMEKHLGPVNFLVNAAG-INRDSLLVRTKTEDMISQLHTNLLGSMLTCKAAMKTMIQ-QGGSIVNVGSIIGLKGNVGQSAYSATKGGLVGFSRSLAKEVARKKIRVNVVAPGFIRTDM 184          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: STDH3_CAEEL (Putative steroid dehydrogenase 3 OS=Caenorhabditis elegans GN=stdh-3 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.189e-11
Identity = 64/235 (27.23%), Postives = 110/235 (46.81%), Query Frame = 3
Query:   66 KSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIR------SNSSVEELARLVVEKKGVP-DIIVNNAGTINKNNKIWDVSPEEFDTVIDT---NVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVP-DGMAIVALNPGVINTDMLTSCFGTSAASYQPPDAWALKAATTILNLTGADNG 737
            K+ +   +ITG + G+G++ + ELAKRG  +   SRTQ KL   + E+       + NV++R      +N S+ +  +L+ +   V   +++NN G + +  +    +    D V +    N   +  +    +P M+  K GIIVN+ S  G +  A  + Y ASK  VE L+  + KE    G+ I A+ P ++ T +      T  + + P  A   K+A   +  T    G
Sbjct:   44 KAGASWAVITGGTDGIGKSFSFELAKRGFNIYIVSRTQSKLEQTKKEIMEK----YSNVEVRFATFDFTNPSISDYKKLLSQLNEVSIGMLINNVGMLFEYPENLHKTVGGIDVVANVTILNTLPVTLLSAGILPQMVSRKTGIIVNIGSVAGAAKMAEWSVYSASKKYVEWLTGCLRKEYEHQGIIIQAITPALVATKLSGH---TETSLFCPDSATFAKSALNTVGHTSQTTG 271          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: RDH7_RAT (Retinol dehydrogenase 7 OS=Rattus norvegicus GN=Rdh7 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.189e-11
Identity = 54/187 (28.88%), Postives = 96/187 (51.34%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDI--IVNNAG-TINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVP-DGMAIVALNPGVINTDM 632
            V ITG   G G  LA++L +RG  V+    T+     L+S+    D    + +D+    S+    + V E+ G   +  +VNNAG ++      W +  ++F +V+D N+ G+  +  + +PL +   +G +VN++S  GR  + L   YC SK+ VE  S S+ +E+   G+ +  + PG   T++
Sbjct:   32 VFITGCDSGFGNLLARQLDRRGMRVLAACLTEKGAEQLRSK--TSDRLETVILDVTKTESIVAATQWVKERVGNRGLWGLVNNAGISVPMGPNEW-MRKKDFASVLDVNLLGVIEVTLNMLPL-VRKARGRVVNIASTMGRM-SLLGGGYCISKYGVEAFSDSLRRELTYFGVKVAIIEPGGFKTNV 213          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: MKAR_USTMA (3-ketoacyl-CoA reductase OS=Ustilago maydis GN=UM04441 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.189e-11
Identity = 60/228 (26.32%), Postives = 110/228 (48.25%), Query Frame = 3
Query:   87 LITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHL-----FLNVDIRSNSSVEELARLVVEKKGV-PDIIVNNAG-TINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPDGMAIVALNPGVINTDMLTSCFG---TSAASYQPPDAWALKAATTILNLTGADNGA 740
            ++TG + G+GR  A +LA++G  ++  SR+ +KL S+ +E+      +      ++  +      E L   V   KG+   ++VNN G + N      + S EE + +I+ NV  +  + +  IP M+  K+G+++N+ S  G+    ++A Y  SK  + G S+++ +EV      V+L    +NT  + S       S+A    P  +     T +L   G + GA
Sbjct:   79 VVTGATDGIGREFALQLARKGFNIVLVSRSPEKLGSVAAEIEAATPGVRTKTQAIDFALGDERQYEGLEHTV---KGLNVGVLVNNVGKSHNMPVTFTETSEEEMEDIIEINVVSVLRVSKMIIPGMVDRKRGLVLNLGSFAGQVTTPMLATYAGSKAFLSGWSQALGEEVKRSNVDVSL----LNTYFVVSNLSKIRKSSAMIPTPKQY----VTQVLKTLGRNGGA 295          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DRS7B_HUMAN (Dehydrogenase/reductase SDR family member 7B OS=Homo sapiens GN=DHRS7B PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.189e-11
Identity = 58/212 (27.36%), Postives = 98/212 (46.23%), Query Frame = 3
Query:   63 GKSVSRT--VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPD------HHLFL-NVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDMLTSCFGTSAASY 668
            GK+  R   V+ITG + GLG+  A+     G  ++ C R    L  L  EL          H  +L   D+  + ++   A  +++  G  DI+VNNAG I+    I D + +    V++TN  G   + +  +P MI  +QG IV +SS  G+      + Y ASK A +     +  E+    + +  ++PG I+T++  +      + Y
Sbjct:   46 GKAYLRNAVVVITGATSGLGKECAKVFYAAGAKLVLCGRNGGALEELIRELTASHATKVQTHKPYLVTFDLTDSGAIVAAAAEILQCFGYVDILVNNAG-ISYRGTIMDTTVDVDKRVMETNYFGPVALTKALLPSMIKRRQGHIVAISSIQGKMSIPFRSAYAASKHATQAFFDCLRAEMEQYEIEVTVISPGYIHTNLSVNAITADGSRY 256          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DHB13_RAT (17-beta hydroxysteroid dehydrogenase 13 OS=Rattus norvegicus GN=Hsd17b13 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.189e-11
Identity = 58/199 (29.15%), Postives = 95/199 (47.74%), Query Frame = 3
Query:   66 KSVS-RTVLITGVSRGLGRALAQELAKRGHTVI-------GCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV----PDGMAIVALNPGVINT 626
            KSV+ +TVLITG   G+GR  A E AK+   ++       G   T  K   L + +     H+F+ VD  + + + +    V ++ G  +I+VNNAG I   + +     EE     + N+ G   +++  +P M+    G IV ++S  G      + PYC+SK+A  G  R++  E+      G+    L P  +NT
Sbjct:   32 KSVAGQTVLITGAGHGIGRLTAYEFAKQKSRLVLWDISKHGVEETAAKCRKLGAVV-----HVFV-VDCSNRAEIYKSVDQVKKEVGDIEIVVNNAGAIYPADLL-STKDEEITKTFEVNILGHFWIIKALLPSMLRRNSGHIVTVASVCGHRVIPYLIPYCSSKFAAVGFHRALTAELDTLGKTGIKTSCLCPVFVNT 223          
The following BLAST results are available for this feature:
BLAST of CK935676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
Y4EK_RHISN9.106e-1227.46Uncharacterized short-chain type dehydrogenase/red... [more]
STCU_EMENI9.106e-1229.02Versicolorin reductase OS=Emericella nidulans GN=s... [more]
NODG_AZOBR9.106e-1229.63Nodulation protein G OS=Azospirillum brasilense GN... [more]
CBR4_XENLA9.106e-1228.72Carbonyl reductase family member 4 OS=Xenopus laev... [more]
CBR4_MOUSE9.106e-1229.79Carbonyl reductase family member 4 OS=Mus musculus... [more]
STDH3_CAEEL1.189e-1127.23Putative steroid dehydrogenase 3 OS=Caenorhabditis... [more]
RDH7_RAT1.189e-1128.88Retinol dehydrogenase 7 OS=Rattus norvegicus GN=Rd... [more]
MKAR_USTMA1.189e-1126.323-ketoacyl-CoA reductase OS=Ustilago maydis GN=UM0... [more]
DRS7B_HUMAN1.189e-1127.36Dehydrogenase/reductase SDR family member 7B OS=Ho... [more]
DHB13_RAT1.189e-1129.1517-beta hydroxysteroid dehydrogenase 13 OS=Rattus ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_G11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935676 ID=CK935676; Name=CK935676; organism=Citrus sinensis; type=EST; length=924bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAAATCCTGGTGTTATTAACACTGACATGCTTACGTCCTGCTTTGGC
ACTTCTGCTGCATCATACCAGCCACCTGATGCATGGGCTTTGAAGGCAGC
TACGACGATACTCAATCTTACAGGAGCAGACAATGGTGCATCTCTTACGG
TGTGACAGAAGCTTTTACATTCAAAATGCTGGGATCCAGCTAGGCGAGCG
TAACAGTTCACTGATAAAATCATATTCACTCTTCACTCATTGAATCAAAA
AGTAGAGCAGAGTGAACTNCATTCATCTTTTGTGACTTCTATGACACCTN
NNNNNCAGGAAAGCGGTTATTCTT
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