CK935676

Overview
NameCK935676
Unique NameCK935676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DHRS4_BOVIN (Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.553e-11
Identity = 54/186 (29.03%), Postives = 90/186 (48.39%), Query Frame = 3
Query:   75 SRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNV-DIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINT 626
            ++  L+T  + G+G A+A+ LA+ G  V+  SR Q  +    + L      +   V  +      E L    V+  G  DI+++NA        + DV  E +D ++D NVK  A + +  +P M     G IV +SS    S    + PY  SK A+ GL++++A E+ +  + +  L PG+I T
Sbjct:   14 NKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKGEGLSVTGTVCHVGKAEDRERLVATAVKLHGGVDILISNAAVSPFFGSLMDVPEEVWDKILDVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLALELAESNVRVNCLAPGLIRT 199          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: BDH2_HUMAN (3-hydroxybutyrate dehydrogenase type 2 OS=Homo sapiens GN=BDH2 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.553e-11
Identity = 51/194 (26.29%), Postives = 98/194 (50.52%), Query Frame = 3
Query:   60 IGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSS-GWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDML 635
            +G+   + +++T  ++G+G+A A   A+ G  VI     + KL  L+ + P     +   +D+     +++ A  V       D++ N AG ++ +  + D   +++D  ++ NV+ +  M++ F+P M+  K G I+NMSS      G      Y  +K AV GL++SVA + +  G+    + PG ++T  L
Sbjct:    1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRV---LDVTKKKQIDQFANEVERL----DVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSL 185          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: YVRD_BACSU (Uncharacterized oxidoreductase yvrD OS=Bacillus subtilis GN=yvrD PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.029e-11
Identity = 60/207 (28.99%), Postives = 97/207 (46.86%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLV--VEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVP-DGMAIVALNPGVINTDMLTSCF-GTSAASYQPPDAW 686
            + VLITG + G+G+A A+   + G  VI   R Q+ +     EL           D+   S  +E A  +  V + G  DI+VNN G     +   DV+ EE++   + NV       RHF+P M+    G I+N++S  G      + PY  +K A+  LSR +A+      + + ++ PG   T+ + S   G + A+ Q  D +
Sbjct:    8 KLVLITGSTSGIGKAAAKSFLQEGAAVIVNGRKQETVDRTIEELSGYGTVHGAAADL---SKTDEAAAFIEKVNEIGDIDILVNNLGFFEVKD-FADVTDEEWNQYFEVNVMSAVRTSRHFLPKMLAKNSGRILNIASEAGVKPLPTMIPYSMTKTALISLSRGMAEMTKGTNVTVNSVLPGPTWTEGVASYMEGAAQAAGQDTDTF 210          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: YCP9_SCHPO (Uncharacterized oxidoreductase C663.09c OS=Schizosaccharomyces pombe GN=SPCC663.09c PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.029e-11
Identity = 51/193 (26.42%), Postives = 92/193 (47.67%), Query Frame = 3
Query:   69 SVSRTVLITGVSRGLGRALAQELAKR-GHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSG---AALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            + ++   I G +RG+G +L +EL+ R G TV   +R  +  T LQ    +  +   + +D+ S  S  E A+ V +     D++  N+G       + +   E ++    TNV G  ++ + F PL+   K   ++  SS  G  G   A   + Y  SK A+    + ++ E+ D     ++++PGV+ TDM
Sbjct:    3 TTNKVYFIAGGNRGIGLSLVKELSSREGTTVFASARKPEAATELQEWSKSHPNVKTVELDVTSQQSANEAAQSVAKAVDGIDVLWLNSGICQSYYTVMEAPEEVWNAHYQTNVLGPIHVFKAFYPLLTKKKTRQVIFTSSECGSMGDFRATGFSAYGQSKAAINFTMKELSVELADEHFTFISIHPGVVKTDM 195          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: TRNH1_ARATH (Tropinone reductase homolog At1g07440 OS=Arabidopsis thaliana GN=At1g07440 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.029e-11
Identity = 57/194 (29.38%), Postives = 100/194 (51.55%), Query Frame = 3
Query:   75 SRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNV-DIRSNSSVEELARLVVEK-KGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDMLTSCF 647
            ++TVL+TG ++G+G A+ +E A  G  +  C+R + +L    S+       +  +V D       E+L + V     G  DI++NN G I ++    D + E+F   I TN++   ++ +   PL+     G I+ MSS  G   A++ + Y A+K A+  L+R++A E   DG+   A+ P VI T +  + +
Sbjct:   14 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAI-RSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY 206          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: KDUD_DICD3 (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Dickeya dadantii (strain 3937) GN=kduD PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.029e-11
Identity = 60/192 (31.25%), Postives = 93/192 (48.44%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGI----ANMLRHFIPLMIPIKQ---GIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTD 629
            +  LITG   GLG+ +A  LA+ G  ++G +  + K T ++         L L  D+   S    L    V + G  DI+VNNAG I + + I + S + +D V++ N+K +      + R F      IKQ   G I+N++S     G   V  Y ASK  V G++R VA E     + + A+ PG + T+
Sbjct:   11 KVALITGCDTGLGQGMAVGLAEAGCDIVGVNIVEPKET-IEKVTAVGRRFLSLTADMSDISGHAALVEKAVAEFGKVDILVNNAGIIRREDAI-EFSEKNWDDVMNLNIKSVFFMSQTVARQF------IKQGHGGKIINIASMLSFQGGIPVPSYTASKKRVMGITRIVANEWAKHNINVNAIAPGYMATN 194          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DRS7B_PONAB (Dehydrogenase/reductase SDR family member 7B OS=Pongo abelii GN=DHRS7B PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 2.029e-11
Identity = 58/212 (27.36%), Postives = 98/212 (46.23%), Query Frame = 3
Query:   63 GKSVSRT--VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPD------HHLFL-NVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDMLTSCFGTSAASY 668
            GK+  R   V+ITG + GLG+  A+     G  ++ C R    L  L  EL          H  +L   D+  + ++   A  +++  G  DI+VNNAG I+    I D + +    V++TN  G   + +  +P MI  +QG IV +SS  G+      + Y ASK A +     +  E+    + +  ++PG I+T++  +      + Y
Sbjct:   46 GKAYLRNAVVVITGATSGLGKECAKVFYAAGAKLVLCGRNGGALEELIRELTASHATKVQTHKPYLVTFDLTDSGAIVAAAAEILQCFGYVDILVNNAG-ISYRGTIMDTTVDVDKRVMETNYFGPVALTKALLPSMIKRRQGHIVAISSIQGKISIPFRSAYAASKHATQAFFDCLRAEMEQYEIEVTVISPGYIHTNLSVNAVTADGSRY 256          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DHB12_ANAPL (Estradiol 17-beta-dehydrogenase 12 OS=Anas platyrhynchos GN=HSD17B12 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.029e-11
Identity = 60/232 (25.86%), Postives = 107/232 (46.12%), Query Frame = 3
Query:   60 IGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNP--DHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPE---EFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDMLTSCFGTSAASYQPPDAWALKAATTILNLTGADNG 737
            +G  +    ++TG + G+G+A A+ELAKRG  V   SR+++KL  +  E+          +  D      + +  R  +E   +  ++VNN G      + +   P+     D +I+ N+  +  M R  +P M+   +G+I+N+SS  G     L+  Y ASK  V+  SR +  E    G+ + ++ P  + T M  S     +     P+ + ++AA   + L    NG
Sbjct:   43 LGPGLGAWAVVTGATDGIGKAYAKELAKRGMKVALISRSKEKLDQVAGEITEQYGVETKVIVADFGEREDIYDRIRAGLEGLEI-GVLVNNVGISYSYPEYFIDVPDLDKTIDKMININIMSVCKMTRLVLPGMLERSKGVILNISSAAGMYPTPLLTLYSASKAFVDYFSRGLHAEYKSKGIIVQSVMPYYVATKM--SKISKPSFDKPTPETY-VRAAIGTVGLQSQTNG 270          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: BDH_BOVIN (D-beta-hydroxybutyrate dehydrogenase, mitochondrial OS=Bos taurus GN=BDH1 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 2.029e-11
Identity = 59/199 (29.65%), Postives = 96/199 (48.24%), Query Frame = 3
Query:   75 SRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPN--PDHHLFLNVDIRSNSSVEELARLVVEKKGVPDI----IVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDMLTSCFG 650
            S+ VLITG   G G +LA+ L   G  V      +DK +    EL +   D    + +++  +  V++ A ++      P+     +VNNAG I+    +   S E +  V + N+ G   + + F+PL+   K G +VN+SS  GR      +PYC +K+ VE  S  +  E+ P G+ +  + PG  N    TS +G
Sbjct:   55 SKAVLITGCDSGFGFSLAKHLHSEGFLVFAGCLMKDKGSDGVKELDSMKSDRLRTVQLNVCKSEEVDKAAEVIRSSLEDPEKGLWGLVNNAG-ISTFGDVEFTSMETYKEVAEVNLWGTVRVTKAFLPLIRRAK-GRVVNISSMMGRMANVARSPYCITKFGVEAFSDCLRYEMHPLGVKVSVVEPG--NFIAATSLYG 249          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: YIV6_YEAST (Uncharacterized oxidoreductase YIR036C OS=Saccharomyces cerevisiae GN=YIR036C PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.650e-11
Identity = 58/205 (28.29%), Postives = 99/205 (48.29%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGH--TVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAG------TINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLM---------IPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVP-DGMAIVALNPGVINTDM 632
            + + +LITG SRG+G  L + + +      V G +RT+  L SLQ E    D  ++  +DI   S +E L   + +K G  D IV NAG      +I+++N   D+  ++++ + D N   I +++   +PL+         + +  G  V   +GW        + Y  SK A+   +  +A E P D +  V + PGV++T M
Sbjct:    1 MGKVILITGASRGIGLQLVKTVIEEDDECIVYGVARTEAGLQSLQREY-GADKFVYRVLDITDRSRMEALVEEIRQKHGKLDGIVANAGMLEPVKSISQSNSEHDI--KQWERLFDVNFFSIVSLVALCLPLLKSSPFVGNIVFVSSGASVKPYNGW--------SAYGCSKAALNHFAMDIASEEPSDKVRAVCIAPGVVDTQM 194          
The following BLAST results are available for this feature:
BLAST of CK935676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
DHRS4_BOVIN1.553e-1129.03Dehydrogenase/reductase SDR family member 4 OS=Bos... [more]
BDH2_HUMAN1.553e-1126.293-hydroxybutyrate dehydrogenase type 2 OS=Homo sap... [more]
YVRD_BACSU2.029e-1128.99Uncharacterized oxidoreductase yvrD OS=Bacillus su... [more]
YCP9_SCHPO2.029e-1126.42Uncharacterized oxidoreductase C663.09c OS=Schizos... [more]
TRNH1_ARATH2.029e-1129.38Tropinone reductase homolog At1g07440 OS=Arabidops... [more]
KDUD_DICD32.029e-1131.252-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=D... [more]
DRS7B_PONAB2.029e-1127.36Dehydrogenase/reductase SDR family member 7B OS=Po... [more]
DHB12_ANAPL2.029e-1125.86Estradiol 17-beta-dehydrogenase 12 OS=Anas platyrh... [more]
BDH_BOVIN2.029e-1129.65D-beta-hydroxybutyrate dehydrogenase, mitochondria... [more]
YIV6_YEAST2.650e-1128.29Uncharacterized oxidoreductase YIR036C OS=Saccharo... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_G11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935676 ID=CK935676; Name=CK935676; organism=Citrus sinensis; type=EST; length=924bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAAATCCTGGTGTTATTAACACTGACATGCTTACGTCCTGCTTTGGC
ACTTCTGCTGCATCATACCAGCCACCTGATGCATGGGCTTTGAAGGCAGC
TACGACGATACTCAATCTTACAGGAGCAGACAATGGTGCATCTCTTACGG
TGTGACAGAAGCTTTTACATTCAAAATGCTGGGATCCAGCTAGGCGAGCG
TAACAGTTCACTGATAAAATCATATTCACTCTTCACTCATTGAATCAAAA
AGTAGAGCAGAGTGAACTNCATTCATCTTTTGTGACTTCTATGACACCTN
NNNNNCAGGAAAGCGGTTATTCTT
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