CK935676

Overview
NameCK935676
Unique NameCK935676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7718 contig Csv1_Contig7718:38..961. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_THEMA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Thermotoga maritima GN=fabG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.024e-19
Identity = 68/189 (35.98%), Postives = 104/189 (55.03%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSE---LPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            +  LITG + G+G+A     A+ G TVI    +++ L SL  E   LP       LNV  R    ++E+   VV+K G  D++VNNAG I ++  +  +  E++D VI+ N+KG+ N+ +  +P MI  + G IVN+SS  G  G      Y ASK  V G++++ AKE+    + + A+ PG I T M
Sbjct:    6 KVCLITGAASGIGKATTLLFAQEGATVIAGDISKENLDSLVKEAEGLPGKVDPYVLNVTDRDQ--IKEVVEKVVQKYGRIDVLVNNAG-ITRDALLVRMKEEDWDAVINVNLKGVFNVTQMVVPYMIKQRNGSIVNVSSVVGIYGNPGQTNYAASKAGVIGMTKTWAKELAGRNIRVNAVAPGFIETPM 191          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_SALTY (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhimurium GN=fabG PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.643e-19
Identity = 61/186 (32.80%), Postives = 104/186 (55.91%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            +  L+TG SRG+GRA+A+ L  RG  VIG + +++   ++   L      L LNV     +S+E +   +  + G  DI+VNNAG I ++N +  +  +E++ +I+TN+  +  + +  +  M+  + G I+ + S  G  G A  A Y A+K  + G S+S+A+EV   G+ +  + PG I TDM
Sbjct:    6 KIALVTGASRGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLMLNV--TDPASIESVLENIRAEFGEVDILVNNAG-ITRDNLLMRMKDDEWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDM 188          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_SALTI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhi GN=fabG PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.643e-19
Identity = 61/186 (32.80%), Postives = 104/186 (55.91%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            +  L+TG SRG+GRA+A+ L  RG  VIG + +++   ++   L      L LNV     +S+E +   +  + G  DI+VNNAG I ++N +  +  +E++ +I+TN+  +  + +  +  M+  + G I+ + S  G  G A  A Y A+K  + G S+S+A+EV   G+ +  + PG I TDM
Sbjct:    6 KIALVTGASRGIGRAIAETLVARGAKVIGTATSENGAKNISDYLGANGKGLMLNV--TDPASIESVLENIRAEFGEVDILVNNAG-ITRDNLLMRMKDDEWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDM 188          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_BUCAI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=fabG PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.509e-19
Identity = 60/185 (32.43%), Postives = 106/185 (57.30%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTD 629
            +T  ITG ++G+G+A+A++L K+G  VIG S T+D +  +   L        LN  +++  S+ E  + + +KK   DI++NNAG I ++N + ++   E+D VI TN+  + ++++  I  MI  +QG I+ + S    +G      Y ASK  + G  +S+A EV   G+ +  ++PG+I T+
Sbjct:    6 QTAFITGANQGIGKAIAKKLIKKGIQVIGTSTTEDGVKRINDYLEGNGFGFVLN--LKNIDSITEKIQEIYKKKHSIDILINNAG-IKEDNLLVNMKSTEWDDVIKTNLSSVFHLVKSVIRSMIKKRQGRIITIGSVIAYTGNKGQVNYSASKSGLIGFHKSLALEVASKGITVNIVSPGLIKTN 187          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: Y0585_STAHJ (Uncharacterized oxidoreductase SH0585 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH0585 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.923e-18
Identity = 62/189 (32.80%), Postives = 102/189 (53.97%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAV----EGLSRSVAKEVPDGMAIVALNPGVINTDM 632
            R  +ITG S G+G A A+ L K+G  V+   R+ DKL +L  ++ N D+   +  D+ +   V+ L   V++  G  DI VN AG + +++KI D   E +D+++DTN+KG+   L   +P       G +VN++S      +   A Y A+K AV     GL + +AK    G+   ++ PG+++T M
Sbjct:    7 RVAIITGASSGIGAATAKALEKQGVKVVLAGRSHDKLNTLAKDM-NEDNIHIVPTDVTNQVEVDALVAKVIDVFGHVDIFVNCAGVM-RSSKITDYQVESWDSMVDTNIKGLLYSLNAILPKFEAQGSGHVVNLASISANEVSKESALYSATKSAVLMIFNGLEKELAK---TGIKTTSILPGMVDTPM 190          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: Y2567_STAAR (Uncharacterized oxidoreductase SAR2567 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2567 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.817e-18
Identity = 55/202 (27.23%), Postives = 108/202 (53.47%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDMLTSCFGTSAASYQPPD 680
            +  ++TG   G+G A+A  L + G  V+   R +DKL ++ ++L   D    +  D+     V+EL ++  +  G  DI++N+AG +  ++KI D   +E+D++ID N+KG     +  +P M+    G ++N++S  G         Y A+K AV  +++ + KE+   G+ + +++PG+++T +  +   T     +P D
Sbjct:    7 KIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQNVANQLAQ-DSVKVVPTDVTKKEEVDELIKMAQQTFGGLDIVINSAGQM-LSSKITDYQVDEWDSMIDVNIKGTLYTAKAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAITATYNPTDRKKLEPQD 206          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_RICBR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia bellii (strain RML369-C) GN=fabG PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.985e-18
Identity = 67/186 (36.02%), Postives = 107/186 (57.53%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            +T LITG S G+G A+A++L K G  VI     ++KL +L ++L +        + + + ++ EE + LV + + + DI+V NAG I K+     +  E+FD VID N+K    + R  I  M+  + G I+N++S  G SG    A YCASK  + G+++S+A EV   G+ + A+ PG I +DM
Sbjct:    7 QTALITGASGGIGGAIARQLHKLGSHVIISGSNEEKLKALGNDLKDN-----YTIKVCNLTNTEECSNLVAQIEKL-DILVCNAG-ITKDTLAIRMKNEDFDQVIDINLKANFILNREAIKKMMTNRYGRIINITSIVGVSGNPGQANYCASKAGLIGMTKSLAYEVATRGITVNAVAPGFIKSDM 185          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: CBR4_DANRE (Carbonyl reductase family member 4 OS=Danio rerio GN=cbr4 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.985e-18
Identity = 66/196 (33.67%), Postives = 103/196 (52.55%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKG--------IANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            +SR  ++ G SRG+GRA ++ LA+RGH ++  SR ++   S    LP  ++HL L+ D+     V++    + +  G    +VN AG IN++  +     E+  +V+ TN+ G        + NML H          G IVN+ S  G  G A    Y ASK  +EG +RS+AKEV    + +  + PG+I+TDM
Sbjct:    1 MSRLAVVFGGSRGIGRAASKLLAQRGHRIVLLSRNKEAAQSTAQSLPG-ENHLGLSCDVSKEEEVQKAFETINKTCGTVGFLVNAAG-INRDALLLRSKSEDMLSVLHTNLLGSMLTCKAAVRNMLSH---------GGAIVNIGSVVGVKGNAGQCVYSASKAGLEGFTRSLAKEVASRNIRVNLVAPGLIHTDM 185          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: Y2778_STAA8 (Uncharacterized oxidoreductase SAOUHSC_02778 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02778 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.511e-18
Identity = 54/202 (26.73%), Postives = 110/202 (54.46%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDMLTSCFGTSAASYQPPD 680
            +  ++TG   G+G A+A  L + G  V+   R ++KL ++ ++L + D    +  D+ +   V+EL ++  +  G  DI++N+AG +  ++KI D   +E+D++ID N+KG     +  +P M+    G ++N++S  G         Y A+K AV  +++ + KE+   G+ + +++PG+++T +  +   T     +P D
Sbjct:    7 KVAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQL-SQDSVKVVPTDVTNKEEVDELIKIAQQTFGGLDIVINSAGQM-LSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAITAAYNPTDRKKLEPQD 206          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: Y2488_STAAC (Uncharacterized oxidoreductase SACOL2488 OS=Staphylococcus aureus (strain COL) GN=SACOL2488 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.511e-18
Identity = 54/202 (26.73%), Postives = 110/202 (54.46%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDMLTSCFGTSAASYQPPD 680
            +  ++TG   G+G A+A  L + G  V+   R ++KL ++ ++L + D    +  D+ +   V+EL ++  +  G  DI++N+AG +  ++KI D   +E+D++ID N+KG     +  +P M+    G ++N++S  G         Y A+K AV  +++ + KE+   G+ + +++PG+++T +  +   T     +P D
Sbjct:    7 KVAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQL-SQDSVKVVPTDVTNKEEVDELIKIAQQTFGGLDIVINSAGQM-LSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAITAAYNPTDRKKLEPQD 206          
The following BLAST results are available for this feature:
BLAST of CK935676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
FABG_THEMA2.024e-1935.983-oxoacyl-[acyl-carrier-protein] reductase OS=Ther... [more]
FABG_SALTY2.643e-1932.803-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]
FABG_SALTI2.643e-1932.803-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]
FABG_BUCAI4.509e-1932.433-oxoacyl-[acyl-carrier-protein] reductase OS=Buch... [more]
Y0585_STAHJ2.923e-1832.80Uncharacterized oxidoreductase SH0585 OS=Staphyloc... [more]
Y2567_STAAR3.817e-1827.23Uncharacterized oxidoreductase SAR2567 OS=Staphylo... [more]
FABG_RICBR4.985e-1836.023-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
CBR4_DANRE4.985e-1833.67Carbonyl reductase family member 4 OS=Danio rerio ... [more]
Y2778_STAA86.511e-1826.73Uncharacterized oxidoreductase SAOUHSC_02778 OS=St... [more]
Y2488_STAAC6.511e-1826.73Uncharacterized oxidoreductase SACOL2488 OS=Staphy... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_G11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935676 ID=CK935676; Name=CK935676; organism=Citrus sinensis; type=EST; length=924bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAAATCCTGGTGTTATTAACACTGACATGCTTACGTCCTGCTTTGGC
ACTTCTGCTGCATCATACCAGCCACCTGATGCATGGGCTTTGAAGGCAGC
TACGACGATACTCAATCTTACAGGAGCAGACAATGGTGCATCTCTTACGG
TGTGACAGAAGCTTTTACATTCAAAATGCTGGGATCCAGCTAGGCGAGCG
TAACAGTTCACTGATAAAATCATATTCACTCTTCACTCATTGAATCAAAA
AGTAGAGCAGAGTGAACTNCATTCATCTTTTGTGACTTCTATGACACCTN
NNNNNCAGGAAAGCGGTTATTCTT
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