CK935676

Overview
NameCK935676
Unique NameCK935676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: RDH7_MOUSE (Retinol dehydrogenase 7 OS=Mus musculus GN=Rdh7 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.650e-11
Identity = 53/186 (28.49%), Postives = 91/186 (48.92%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDI--IVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVP-DGMAIVALNPGVINTDM 632
            V ITG   G G  LA++L +RG  V+    T+     L+++    D    + +D+    S+    + V E+ G   +  +VNNAG        W +  E+F  ++D N+ G+  +    +PL +   +G +VN+SS  GR  +     YC SK+ VE  S S+ +E+   G+ +  + PG   T++
Sbjct:   32 VFITGCDSGFGNLLARQLDRRGMRVLAACLTEKGAEQLRNK--TSDRLETVILDVTKTESIVAATQWVKERVGNRGLWGLVNNAGICVFAINEW-LKKEDFANILDVNLLGMIEVTLSMLPL-VRKARGRVVNISSSMGRV-SLCGGGYCISKYGVEAFSDSLRREISYFGVKVAIIEPGGFRTNV 212          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: PHBB_RALEH (Acetoacetyl-CoA reductase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=phbB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.650e-11
Identity = 54/189 (28.57%), Postives = 92/189 (48.68%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVI-GCSRTQDKLTS-LQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDML 635
            R   +TG   G+G A+ Q LAK G  V+ GC     +    L+ +       +    ++    S +     V  + G  D+++NNAG I ++     ++  ++D VIDTN+  + N+ +  I  M     G IVN+SS  G+ G      Y  +K  + G + ++A+EV   G+ +  ++PG I TDM+
Sbjct:    4 RIAYVTGGMGGIGTAICQRLAKDGFRVVAGCGPNSPRREKWLEQQKALGFDFIASEGNVADWDSTKTAFDKVKSEVGEVDVLINNAG-ITRDVVFRKMTRADWDAVIDTNLTSLFNVTKQVIDGMADRGWGRIVNISSVNGQKGQFGQTNYSTAKAGLHGFTMALAQEVATKGVTVNTVSPGYIATDMV 191          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: MKAR_AJECN (3-ketoacyl-CoA reductase OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=HCAG_07127 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.650e-11
Identity = 54/198 (27.27%), Postives = 97/198 (48.99%), Query Frame = 3
Query:   87 LITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSEL----PNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSP-EEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPDGMAIVALNPGVINTDMLTSCFGTSAAS 665
            L+TG S G+G+  + +LA+ G+ ++  SRT  KL ++  E+    P     +F     ++N    E  +L+++   +  I+VNN G  +     + ++P EE + +I  N  G   + +   P M+  K+G+I+ M+S  G     L+A YC SK  ++  S ++  E         L P  +  +++ S   TSA S
Sbjct:   64 LVTGASDGIGKEYSLQLARAGYNILLVSRTTSKLAAVADEIKSKSPTVQTKVFAMDFFKNNDGDYENLKLLIQDLDI-SILVNNVGRSHSIPTPFVLTPLEELENIIMINCTGTLRITQLVAPGMMQRKRGLILTMASFAGMIPTPLLATYCGSKAFLQYWSIALGAE---------LQPYGVQVELVQSHLVTSAMS 251          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: KDSR_BOVIN (3-ketodihydrosphingosine reductase OS=Bos taurus GN=KDSR PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.650e-11
Identity = 51/171 (29.82%), Postives = 88/171 (51.46%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHH-----LFLNVDIRSN-SSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV 578
            V++TG S G+G+ +A E  K+G  +   +R +DKL   + E+     +     L ++VD+  + S VE + +   EK G  D++VN AG ++ + K  D+    F+ ++  N  G     R  I  M   + G +V +SS  G+ G      Y +SK+A+ GL+ ++  EV
Sbjct:   35 VVVTGGSSGIGKCIAIECYKQGAFITLVARNEDKLLQAKKEIEKHSINDKQVVLCISVDVSQDYSQVENVIKQAQEKLGPVDMLVNCAG-MSLSGKFEDLEVSTFERLMSINYLGSVYPSRAVIATMKERRMGRVVFVSSQAGQLGLFGYTAYSSSKFALRGLAEALQMEV 204          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DRS7B_MOUSE (Dehydrogenase/reductase SDR family member 7B OS=Mus musculus GN=Dhrs7b PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.650e-11
Identity = 52/201 (25.87%), Postives = 92/201 (45.77%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPD----HHLFL-NVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDMLTSCFGTSAASY 668
            V++TG + GLGR  A+     G  ++ C R    L  L  EL        H  F+   D+    ++   A  +++  G  D+++NNAG I+    I D   +    V++ N  G   + +  +P M+  KQG IV +SS  G+      + Y ASK A +     +  E+ +  + +  ++PG I+T++  +      + Y
Sbjct:   55 VVVTGATSGLGRECAKVFHAAGAKLVLCGRNVKALEELSRELAGSSQGQTHQPFVVTFDLADPGTIAAAAAEILQCFGYVDVLINNAG-ISYRGTISDTIVDVDRKVMEINYFGPVALTKALLPSMVERKQGHIVAISSIQGKISIPFRSAYSASKHATQAFFDCLRAEMEEANIKVTVISPGYIHTNLSVNAVTADGSRY 254          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DHRS4_PONAB (Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.650e-11
Identity = 56/186 (30.11%), Postives = 91/186 (48.92%), Query Frame = 3
Query:   75 SRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNV-DIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINT 626
            ++  L+T  + G+G A+A+ LA+ G  V+  SR Q  +    + L      +   V  +      E L    V+  G  DI+V+NA        + DV+ E +D  +D NVK  A M +  +P M     G +V +SS    S +   +PY  SK A+ GL++++A E+ P  + +  L PG+I T
Sbjct:   14 NKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSLMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKT 199          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DHG_BACME (Glucose 1-dehydrogenase OS=Bacillus megaterium PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.650e-11
Identity = 53/190 (27.89%), Postives = 99/190 (52.11%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELA-KRGHTVIGCSRTQDKLTSLQSELPN-PDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGI----ANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINT 626
            + V+ITG S GLG+++A   A ++   V+     +D+  S+  E+       + +  D+   S V  L +  +++ G  D+++NNAG  N  +   ++S  +++ VIDTN+ G        +++F+   I   +G ++NMSS   +    L   Y ASK  ++ ++ ++A E  P G+ +  + PG INT
Sbjct:    8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS-HEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDI---KGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINT 193          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: BPHB_PSEPS (Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase OS=Pseudomonas pseudoalcaligenes GN=bphB PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.650e-11
Identity = 57/196 (29.08%), Postives = 98/196 (50.00%), Query Frame = 3
Query:   66 KSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEE-----FDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSG--WGRSGAALVAPYCASKWAVEGLSRSVAKEVPDGMAIVALNPGVINTDM 632
            K     VLITG + GLGRAL           +   ++ ++L  L+++L   D+ L +  D+RS    ++ A   V + G  D ++ NAG  + +  + D+ PEE     FD V   NVKG  + ++  +P ++  +  +I  +S+   +   G  L   Y A+K A+ GL R +A E+   + +  + PG +N+DM
Sbjct:    2 KLKGEAVLITGGASGLGRALVDRFVAEAKVAV-LDKSAERLAELETDLG--DNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDL-PEESLDAAFDEVFHINVKGYIHAVKA-LPALVASRGNVIFTISNAGFYPNGGGPL---YTAAKQAIVGLVRELAFELAPYVRVNGVGPGGMNSDM 189          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: YVX3_CAEEL (Uncharacterized oxidoreductase T05C12.3 OS=Caenorhabditis elegans GN=T05C12.3 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.460e-11
Identity = 57/193 (29.53%), Postives = 91/193 (47.15%), Query Frame = 3
Query:   63 GKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLF--LNVDIRSNSSVEELARLVVEKKGV-PDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGI-IVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINT 626
            G    +  L+TG   G+G+A+A   A  G +V   +R  +KL     E+      +     +DI+    V +    + +K G  PDI+VNNA   N       +SP    T+ID  +KG  N+        I  K G  + ++++ + RSGA  + P   SK  VE +++S+A E    G+   A++PG I T
Sbjct:   21 GALKGKVALVTGGGTGIGKAIATTFAHLGASVAIAARRMEKLEQTAEEIMKTTGGICEPFRMDIKDPGMVSDTFDKIDKKFGKHPDILVNNAAG-NFIMATERLSPNAHGTIIDIVLKGTMNVTTELGKRCIQSKTGASVTSITAAYARSGAPFIVPSAVSKAGVEIMTKSLATEWSKYGLRFNAVSPGPIPT 212          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: Y4VI_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4vI OS=Rhizobium sp. (strain NGR234) GN=NGR_a01150 PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.460e-11
Identity = 53/187 (28.34%), Postives = 87/187 (46.52%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVA-KEVPDGMAIVALNPGVINTDML 635
            R +++TG + G+GRAL    A  G  V+        +  L   L  P  HL L VD+     V  L  L+ ++    +++VNNAG         D + E+F   +  N+ G  ++      LM P     IVN++S  G  G    + Y ASK  +  +++S+A +    G+ + A+ PG + T M+
Sbjct:   10 RVIVVTGAAGGIGRALVDIFAANGDVVVAVDLPDSGVIELGQNLGEP--HLGLEVDVSREDDVVALRALLEKRFSRIEVLVNNAGIGPTMAATADTALEDFQRALAINLVGAYSVACETAKLMKP--GAAIVNVASLAGLLGNPKRSAYAASKAGLISITKSLACRWASRGIRVTAVAPGHVRTPMV 192          
The following BLAST results are available for this feature:
BLAST of CK935676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
RDH7_MOUSE2.650e-1128.49Retinol dehydrogenase 7 OS=Mus musculus GN=Rdh7 PE... [more]
PHBB_RALEH2.650e-1128.57Acetoacetyl-CoA reductase OS=Ralstonia eutropha (s... [more]
MKAR_AJECN2.650e-1127.273-ketoacyl-CoA reductase OS=Ajellomyces capsulata ... [more]
KDSR_BOVIN2.650e-1129.823-ketodihydrosphingosine reductase OS=Bos taurus G... [more]
DRS7B_MOUSE2.650e-1125.87Dehydrogenase/reductase SDR family member 7B OS=Mu... [more]
DHRS4_PONAB2.650e-1130.11Dehydrogenase/reductase SDR family member 4 OS=Pon... [more]
DHG_BACME2.650e-1127.89Glucose 1-dehydrogenase OS=Bacillus megaterium PE=... [more]
BPHB_PSEPS2.650e-1129.08Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase OS=... [more]
YVX3_CAEEL3.460e-1129.53Uncharacterized oxidoreductase T05C12.3 OS=Caenorh... [more]
Y4VI_RHISN3.460e-1128.34Uncharacterized short-chain type dehydrogenase/red... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_G11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935676 ID=CK935676; Name=CK935676; organism=Citrus sinensis; type=EST; length=924bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAAATCCTGGTGTTATTAACACTGACATGCTTACGTCCTGCTTTGGC
ACTTCTGCTGCATCATACCAGCCACCTGATGCATGGGCTTTGAAGGCAGC
TACGACGATACTCAATCTTACAGGAGCAGACAATGGTGCATCTCTTACGG
TGTGACAGAAGCTTTTACATTCAAAATGCTGGGATCCAGCTAGGCGAGCG
TAACAGTTCACTGATAAAATCATATTCACTCTTCACTCATTGAATCAAAA
AGTAGAGCAGAGTGAACTNCATTCATCTTTTGTGACTTCTATGACACCTN
NNNNNCAGGAAAGCGGTTATTCTT
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