CK935676
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: RDHE2_MOUSE (Epidermal retinol dehydrogenase 2 OS=Mus musculus GN=Sdr16c5 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.460e-11 Identity = 58/194 (29.90%), Postives = 84/194 (43.30%), Query Frame = 3 Query: 84 VLITGVSRGLGRALAQELAKRGHTVIGCS---RTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV----PDGMAIVALNPGVINTDMLTSC 644 VLITG GLGR LA + A+ G ++ D+ L E H + D V +A V ++ G I++NNAG + N + D + + D N K M + F+P MI G +V +SS G G ++ YCASK+A G + S+ E G+ + P I T M C Sbjct: 43 VLITGAGSGLGRLLALQFARLGAVLVLWDVNKEANDETHQLAREAGAARVHAY-TCDCSRREEVYRVADQVKKEVGDVSILINNAGIVTGRNFL-DCPDDLMEKSFDVNFKAHLWMYKAFLPAMIANNHGHLVCISSSAGLIGVNGLSDYCASKFAALGFAESMFIETLAKKQWGIKTTIVCPFFIKTGMFEGC 234
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: RDH3_RAT (Retinol dehydrogenase 3 OS=Rattus norvegicus GN=Rdh3 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.460e-11 Identity = 53/187 (28.34%), Postives = 96/187 (51.34%), Query Frame = 3 Query: 84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDI--IVNNAG-TINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVP-DGMAIVALNPGVINTDM 632 V ITG G G LA++L +RG V+ T+ L+S+ D + +D+ S+ + V E+ G + +VNNAG ++ W + ++F +V+D N+ G+ + + +PL + +G +VN++S GR + + YC SK+ VE S S+ +E+ G+ + + PG T++ Sbjct: 32 VFITGCDSGFGNLLARQLDRRGMRVLAACLTEKGAEQLRSK--TSDRLETVILDVTKTESIVAATQWVKERVGNRGLWGLVNNAGISVPVGPNEW-MRKKDFASVLDVNLLGVIEVTLNMLPL-VRKARGRVVNIASTMGRM-SLVGGGYCISKYGVEAFSDSLRRELTYFGVKVAIIEPGGFKTNV 213
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: NYC1_ORYSJ (Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Oryza sativa subsp. japonica GN=NYC1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.460e-11 Identity = 63/232 (27.16%), Postives = 103/232 (44.40%), Query Frame = 3 Query: 9 GREITITTMAATTPFNGIGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSEL-----------PNPDHHLFLNV-------DIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLM-IPIKQGIIVNM-SSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDMLTS 641 G I T + A + K+ R V+ITG +RGLG+ALA+E G V+ SR+ + + +EL + L+ D+ V++L ++ G DI +NNAGT + + S E+ ++ TN+ G R + +M K G + NM +G G S L A Y ++K + S+ KE + + +PG++ TD+L S Sbjct: 148 GGVIIGTMIGANSVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVIASRSPESVLQTINELEENIQEGLSVAKKKQREILLHAKVVGTSCDVCKPEDVKKLVNFAKDELGSIDIWINNAGTNKGFRPLVNFSDEDISQIVSTNLVGSLLCTREAMNVMQHQQKGGHVFNMDGAGSGGSSTPLTAVYGSTKCGLRQFQASLLKESRRSKVGVHTASPGMVLTDLLLS 379
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DHRS1_HUMAN (Dehydrogenase/reductase SDR family member 1 OS=Homo sapiens GN=DHRS1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.460e-11 Identity = 63/205 (30.73%), Postives = 96/205 (46.83%), Query Frame = 3 Query: 48 PFNGIGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNV-DIRSNSSVEELARLV-VEKKGVPDIIVNNA-----GTINKNNK-IWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDML 635 P NG + ++TG SRG+GR +A +L K G TV R D L + E + V D S V L V E++G D++VNNA +N NK W+ +D + + ++G + LM+P QG+IV +SS G PY K A + L+ A E+ G++ V+L PG++ T++L Sbjct: 4 PMNG------QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSP-GSLQYMFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELL 201
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DHR11_CHICK (Dehydrogenase/reductase SDR family member 11 OS=Gallus gallus GN=DHRS11 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.460e-11 Identity = 52/193 (26.94%), Postives = 95/193 (49.22%), Query Frame = 3 Query: 78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPN---PDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIP--IKQGIIVNMSSGWGRS--GAALVAPYCASKWAVEGLSRSVAKEVPDG---MAIVALNPGVINT 626 R L+TG S G+G A+A+ L + G V+GC+R+ DK+ L +E + P + D+ + + + + D+ +NNAG + + + E + T+ID NV ++ R M I G I+N++S G S ++V Y A+K+AV L+ + +E+ + + ++PG++ T Sbjct: 7 RVALVTGASVGIGAAVARALVQHGMKVVGCARSVDKIEKLAAECQSAGYPGTLIPYKCDLSNEEEILSMFSAIKTLHQGVDVCINNAG-LARPEPLLSGKTEGWRTMIDVNVMAVSICTREAYQSMKERNIDDGHIININSMNGHSVVPQSVVHFYSATKYAVTALTEGLRQELREAKTHIRATCISPGLVET 198
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: CBR4_RAT (Carbonyl reductase family member 4 OS=Rattus norvegicus GN=Cbr4 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.460e-11 Identity = 57/188 (30.32%), Postives = 94/188 (50.00%), Query Frame = 3 Query: 72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVP-DGMAIVALNPGVINTDM 632 + + + G SRG+G+A+AQ +A++G+ + +R + + SEL HL +I V + + G + +VN AG IN+++ + E+ + + TN+ G R + MI + G IVN+ S G G A Y A+K + G SRS+AKEV + + + PG I+TDM Sbjct: 1 MDKVCAVFGGSRGIGKAVAQLMAQKGYRLAIVARNLEVAKATASELGGI--HLAFRCNIAKEGDVHSTFEEMEKHLGPVNFLVNAAG-INRDSLLVRTKTEDMLSQLHTNLLGTMLTCRAAMRTMIQ-QGGSIVNVGSIIGLKGNVGQAAYSATKGGLIGFSRSLAKEVARKKIRVNVVAPGFIHTDM 184
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: STDH1_CAEEL (Putative steroid dehydrogenase 1 OS=Caenorhabditis elegans GN=stdh-1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.519e-11 Identity = 64/224 (28.57%), Postives = 106/224 (47.32%), Query Frame = 3 Query: 66 KSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSEL--PNPDHHLFLNVDIRSNSSVEELARLVVEKKGVP-DIIVNNAGTINKNNKIWDVSPEEFDTVIDT---NVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDMLTSCFGTSAASYQPPDA--WALKAATTI 710 K+ + ++TG + G+G++ + ELAKRG V SRTQ KL + E+ +PD + +N SV + +L+ + V I++NN G ++ D++ + N + +P M+P K GIIVN+ S G + A + Y A+K VE ++ + KE G+ A+ P ++ T M G S+ PD+ +A A TI Sbjct: 44 KAGASWAVVTGATDGIGKSYSFELAKRGFNVYIVSRTQSKLEHTKKEILEVHPDIEVRFATFDFTNPSVSDYEKLLSKLNEVSIGILINNVGMFFDYPEMLHKINGGIDSIANVTIINTLPATLLSAGILPQMVPRKAGIIVNIGSVAGLATMAEWSVYSATKKYVEWITGCLQKEYGHQGIIFQAITPAMVATKMA----GNPNTSFFTPDSDTFAKSALNTI 263
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: SDR1_PICAB (Short-chain type dehydrogenase/reductase OS=Picea abies PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.519e-11 Identity = 61/196 (31.12%), Postives = 89/196 (45.41%), Query Frame = 3 Query: 78 RTVLITGVSRGLGRALAQELAKRG-HTVIGCSRTQDKLTSLQSELPNPD-------HHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAG-TINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPDGMAIVA--LNPGVINTDM 632 R ++TG SRG+GR +A +A++G VI S Q + S + N + D+ S V +L G I+VNNAG T +K + S EE+D + N KG R ++ G I+N+SS Y ASK AVE ++R +A+E+ G I A + PG + TDM Sbjct: 22 RVAIVTGASRGIGREIALNMAEKGAKVVIHYSSNQHAAEEVASIINNKSPSSGDGVRAIVCKADVAEPSQVAQLFDTAEHAFGPLHIVVNNAGVTDSKYPTLAQTSDEEWDRIFQVNCKGAFLCSREAAKRVVRGGGGRIINISSSLVAMPIPRYGAYTASKAAVEMMTRILAQEL-RGTQITANCVAPGPVATDM 216
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: KDUD_ECOLI (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Escherichia coli (strain K12) GN=kduD PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 4.519e-11 Identity = 56/194 (28.87%), Postives = 96/194 (49.48%), Query Frame = 3 Query: 78 RTVLITGVSRGLGRALAQELAKRGHTVIGCS-----RTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANM----LRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTD 629 + ++TG GLG+ +A LA+ G ++G + T +++T+L L L D+R + L V + G DI+VNNAG I + + + + S +++D V++ N+K + M +HFI G I+N++S G V Y ASK V G++R +A E + + A+ PG + T+ Sbjct: 11 KVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVEPTETIEQVTALGRRF------LSLTADLRKIDGIPALLDRAVAEFGHIDILVNNAGLIRREDAL-EFSEKDWDDVMNLNIKSVFFMSQAAAKHFI---AQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATN 194
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DHK2_STRVN (Granaticin polyketide synthase putative ketoacyl reductase 2 OS=Streptomyces violaceoruber GN=gra-orf6 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.519e-11 Identity = 51/183 (27.87%), Postives = 84/183 (45.90%), Query Frame = 3 Query: 87 LITGVSRGLGRALAQELAKRGH-TVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINK--NNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPDGMAIVALNPGVINT 626 L+TG S G+G+ +AQ LA G+ V+ +R+ + + LP+ L++ D+ + L VE G D++VNNAG + + +PE + ++ NV G +P + G +VN+SS G A PY S +R +A V + + A+ PG+I T Sbjct: 12 LVTGSSSGIGQTVAQRLAAEGYRVVVNSARSVEDGEKTAAALPDA---LYVRADVSEEADARRLVDTAVEHYGRLDVLVNNAGRTRAIPHADLAAATPEVWREILGLNVIGTWQTTVAAMPHLARSGNGSVVNVSSIAGSRPAGSSIPYAVSNGGHRAQTRLLANTVGPAVRVNAVAPGLIET 191 The following BLAST results are available for this feature:
BLAST of CK935676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 245
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935676 ID=CK935676; Name=CK935676; organism=Citrus sinensis; type=EST; length=924bpback to top |