CK935676
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DHB1_HUMAN (Estradiol 17-beta-dehydrogenase 1 OS=Homo sapiens GN=HSD17B1 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 4.519e-11 Identity = 61/198 (30.81%), Postives = 93/198 (46.97%), Query Frame = 3 Query: 84 VLITGVSRGLGRALAQELAK------RGHTVIGCSRTQDKLTSLQSELPNPDHHL-FLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVA-KEVPDGMAIVALNPGVINTDMLTSCFGT 653 VLITG S G+G LA LA + + + +TQ +L L P L L +D+R + SV V E G D++V NAG + + + + +V+D NV G ML+ F+P M G ++ S G G YCASK+A+EGL S+A +P G+ + + G ++T + G+ Sbjct: 6 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE--GRVDVLVCNAG-LGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGS 200
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DHB12_XENTR (Estradiol 17-beta-dehydrogenase 12 OS=Xenopus tropicalis GN=hsd17b12 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.519e-11 Identity = 50/199 (25.13%), Postives = 97/199 (48.74%), Query Frame = 3 Query: 60 IGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPD----IIVNNAGTINKNNKIWDVSPE---EFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDM 632 +G + + ++TG + G+G+A A+ELAKRG ++ SR+ +KL + ++ + E R+ + G+ D ++VNN G ++ + + P+ D +I+ N+ + M R +P M+ +G+I+N+SS G L+ Y A+K V+ SR + E G+ + ++ P + T + Sbjct: 51 VGPRIGKWAVVTGATDGIGKAYAEELAKRGMNIVLISRSPEKLEEVAKQIKEKFKVETKIIAADFGKPTEIYGRI---ESGLRDLEIGVLVNNVGVSYEHPEYFLEIPDLENTLDKMININITSVCQMTRLVLPGMLGRGRGVILNISSASGMYPVPLLTVYSATKAFVDFFSRGLQAEYRSKGVTVQSVLPFYVATKL 246
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DHB12_MOUSE (Estradiol 17-beta-dehydrogenase 12 OS=Mus musculus GN=Hsd17b12 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.519e-11 Identity = 53/202 (26.24%), Postives = 106/202 (52.48%), Query Frame = 3 Query: 60 IGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRS---NSSVEELARLVVEKKGVP----DIIVNNAGTINKNNKIWDVSPEEFDTV---IDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632 +G + ++TG + G+G+A A+ELAKRG ++ SR+QDKL + + + NV+ R+ + S++++ + K G+ ++VNN G + + + P+ +T+ I+ NV + + R +P M+ +G+I+N+SS G L+ Y A+K V+ S+ + +E G+ + ++ P ++ T + Sbjct: 45 VGPRLGEWAVVTGGTDGIGKAYAEELAKRGMKIVLISRSQDKLNQVSNNIKEK-----FNVETRTIAVDFSLDDIYDKI--KTGLSGLEIGVLVNNVGMSYEYPEYFLEIPDLDNTIKKLININVLSVCKVTRLVLPGMVERSKGVILNISSASGMLPVPLLTIYSATKAFVDFFSQCLHEEYKSKGIFVQSVMPYLVATKL 239
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: Y1570_MYCBO (Uncharacterized oxidoreductase Mb1570 OS=Mycobacterium bovis GN=Mb1570 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.903e-11 Identity = 53/193 (27.46%), Postives = 99/193 (51.30%), Query Frame = 3 Query: 78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSEL----PNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAG-TINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSV-AKEVPDGMAIVALNPGVINTDMLT 638 + VLITG S G+G A A+++A+ G TV+ +RT + L ++ +++ N D+ ++ +A V+ G DI++NNAG +I ++ ++ ++ + N G ++ FIP M G IVN+SS ++ A Y ASK A++ L ++ A+ V D + ++ ++ T M++ Sbjct: 54 KVVLITGGSSGIGAAAAKKIAEAGGTVVLVARTLENLENVANDIRAIRGNGGTAHVYPCDLSDMDAIAVMADQVLGDLGGVDILINNAGRSIRRSLELSYDRIHDYQRTMQLNYLGAVQLILKFIPGMRERHFGHIVNVSSVGVQTRAPRFGAYIASKAALDSLCDALQAETVHDNVRFTTVHMALVRTPMIS 246
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: Y1543_MYCTU (Uncharacterized oxidoreductase Rv1543/MT1595 OS=Mycobacterium tuberculosis GN=Rv1543 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.903e-11 Identity = 53/193 (27.46%), Postives = 99/193 (51.30%), Query Frame = 3 Query: 78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSEL----PNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAG-TINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSV-AKEVPDGMAIVALNPGVINTDMLT 638 + VLITG S G+G A A+++A+ G TV+ +RT + L ++ +++ N D+ ++ +A V+ G DI++NNAG +I ++ ++ ++ + N G ++ FIP M G IVN+SS ++ A Y ASK A++ L ++ A+ V D + ++ ++ T M++ Sbjct: 54 KVVLITGGSSGIGAAAAKKIAEAGGTVVLVARTLENLENVANDIRAIRGNGGTAHVYPCDLSDMDAIAVMADQVLGDLGGVDILINNAGRSIRRSLELSYDRIHDYQRTMQLNYLGAVQLILKFIPGMRERHFGHIVNVSSVGVQTRAPRFGAYIASKAALDSLCDALQAETVHDNVRFTTVHMALVRTPMIS 246
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: RDH8_BOVIN (Retinol dehydrogenase 8 OS=Bos taurus GN=RDH8 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.903e-11 Identity = 57/190 (30.00%), Postives = 93/190 (48.95%), Query Frame = 3 Query: 78 RTVLITGVSRGLGRALAQELA---KRGHTVIGCSRTQDKLTSLQSELPNPDHHLFL--NVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPDGMAIVAL-NPGVINTD 629 RTVLI+G S G+G LA +LA ++ + V+ R K +L++ +D+ S+ SV + + + G D++VNNAG + + +S V DTN G +++ +P M +QG IV +SS G G Y ASK+A+EG S+A ++ ++L PG + T+ Sbjct: 6 RTVLISGCSSGIGLELAVQLAHDPRQRYQVVATMRDLGKKGTLETAAGEALGQTLTVAQLDVCSDESVAQCLNCI--QGGEVDVLVNNAG-VGLVGPLEGLSLAAMQNVFDTNFFGAVRLVKAVLPSMKRRRQGHIVVVSSVMGLQGVVFNEVYAASKFAMEGFFESLAVQLLQFNIFISLVEPGPVVTE 192
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: RDH16_HUMAN (Retinol dehydrogenase 16 OS=Homo sapiens GN=RDH16 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 5.903e-11 Identity = 55/185 (29.73%), Postives = 91/185 (49.19%), Query Frame = 3 Query: 84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLV---VEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVP-DGMAIVALNPGVINT 626 V ITG G G+ LA++L RG V+ T+ L+ + D + +D+ SV A+ V V KG+ +VNNAG ++ ++F T++D N+ G+ ++ +PL + +G +VN+SS GR + YC SK+ VE S S+ +E+ G+ + + PG T Sbjct: 32 VFITGCDSGFGKLLARQLDARGLRVLAACLTEKGAEQLRGQ--TSDRLETVTLDVTKTESVAAAAQWVKECVRDKGLWG-LVNNAGISLPTAPNELLTKQDFVTILDVNLLGVIDVTLSLLPL-VRRARGRVVNVSSVMGRV-SLFGGGYCISKYGVEAFSDSLRRELSYFGVKVAMIEPGYFKT 211
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: RD10A_DANRE (Retinol dehydrogenase 10-A OS=Danio rerio GN=rdh10a PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.903e-11 Identity = 60/222 (27.03%), Postives = 99/222 (44.59%), Query Frame = 3 Query: 66 KSVSRTV-LITGVSRGLGRALAQELAKRGHTVI-----------------GCSRTQDKLTSLQS------ELPNPDHHLFLNV-DIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV----PDGMAIVALNPGVINTDMLTSC 644 KSV+ V +ITG GLGR A+E A+R T++ R QD S + E+P ++ V D+ SV A V + G D+++NNAG ++ ++ + + E + + N + F+P M+ + G IV ++S G A V YCASK+ G S++ E+ DG+ + + P +++T M C Sbjct: 32 KSVAGQVCVITGAGGGLGRLFAKEFARRRATLVLWDINSHSNEETAEMVRQIYREQDNPMSKEGAVGGVEEVPPFQPQVYTYVLDVGKRESVYSTAEKVRREVGEVDLLINNAGVVSGHHLL-ECPDELIERTMVVNCHAHFWTTKAFLPKMLEMNHGHIVTVASSLGLFSTAGVEDYCASKFGAIGFHESLSHEIQASEKDGIKMTLVCPYLVDTGMFRGC 252
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: PGDH_RAT (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Rattus norvegicus GN=Hpgd PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 5.903e-11 Identity = 57/195 (29.23%), Postives = 89/195 (45.64%), Query Frame = 3 Query: 78 RTVLITGVSRGLGRALAQELAKRGHTVIGCS---RTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPE-EFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE---VPDGMAIVALNPGVINTDMLTS 641 + L+TG ++G+G+A + L G V T K + E P LF+ D+ + + R VV+ G DI+VNNAG N+ N W+ + + +VI G+ M + + GII+N+SS G A YCASK + G +RS A + G+ + + PG + T +L S Sbjct: 6 KVALVTGAAQGIGKAFTEALLLHGAKVALVDWNLETGVKCKAALDEQFEPQKTLFIQCDVADQKQLRDTFRKVVDHFGRLDILVNNAGVNNEKN--WEQTLQINLVSVISGTYLGLDYMSK-----QNGGEGGIIINISSIAGLMPVAQQPVYCASKHGIIGFTRSAAMAANLMKSGVRLNVICPGFVKTPILES 193
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: NYC1_ARATH (Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Arabidopsis thaliana GN=NYC1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.903e-11 Identity = 58/209 (27.75%), Postives = 94/209 (44.98%), Query Frame = 3 Query: 78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNV------------------DIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMI-PIKQGIIVNM-SSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDMLTS 641 R V+ITG +RGLG+ALA+E G VI SR+ + + EL + N D+ VE+L+ V++ G +I +NNAGT + + + E+ ++ TN+ G R + +M G I NM +G G S L A Y ++K + S+ KE + + +PG++ T++L S Sbjct: 162 RNVVITGSTRGLGKALAREFLLSGDRVIVTSRSSESVDMTVKELEQNLKEIMSNASESARKKLSDAKVVGIACDVCKPEDVEKLSNFAVKELGSINIWINNAGTNKGFRPLLEFTEEDITQIVSTNLIGSILCTRGAMDVMSRQHSGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQFHGSIVKESQKTNVGLHTASPGMVLTELLLS 370 The following BLAST results are available for this feature:
BLAST of CK935676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 245
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935676 ID=CK935676; Name=CK935676; organism=Citrus sinensis; type=EST; length=924bpback to top |