CK935676

Overview
NameCK935676
Unique NameCK935676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: Y2422_STAA3 (Uncharacterized oxidoreductase SAUSA300_2422 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_2422 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.511e-18
Identity = 54/202 (26.73%), Postives = 110/202 (54.46%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDMLTSCFGTSAASYQPPD 680
            +  ++TG   G+G A+A  L + G  V+   R ++KL ++ ++L + D    +  D+ +   V+EL ++  +  G  DI++N+AG +  ++KI D   +E+D++ID N+KG     +  +P M+    G ++N++S  G         Y A+K AV  +++ + KE+   G+ + +++PG+++T +  +   T     +P D
Sbjct:    7 KVAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQL-SQDSVKVVPTDVTNKEEVDELIKIAQQTFGGLDIVINSAGQM-LSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAITAAYNPTDRKKLEPQD 206          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: UCPA_ECOLI (Oxidoreductase ucpA OS=Escherichia coli (strain K12) GN=ucpA PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 8.504e-18
Identity = 68/197 (34.52%), Postives = 103/197 (52.28%), Query Frame = 3
Query:   60 IGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNV-DIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGA-ALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDMLTS 641
            +GK   +T LITG  +G+G  +A+  A+ G  +I    + + +  L  EL    H     V D+R  +SV    +   EK+G  DI+VNNAG     + + D+S ++ D  ID N+KG+ N+ +  +P MI  K G IV MSS  G   A      Y  +K A+ GL++S+A E    G+ + A+ PG + T M  S
Sbjct:    1 MGKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFL-DMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAES 195          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: UCPA_ECO57 (Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN=ucpA PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 8.504e-18
Identity = 68/197 (34.52%), Postives = 103/197 (52.28%), Query Frame = 3
Query:   60 IGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNV-DIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGA-ALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDMLTS 641
            +GK   +T LITG  +G+G  +A+  A+ G  +I    + + +  L  EL    H     V D+R  +SV    +   EK+G  DI+VNNAG     + + D+S ++ D  ID N+KG+ N+ +  +P MI  K G IV MSS  G   A      Y  +K A+ GL++S+A E    G+ + A+ PG + T M  S
Sbjct:    1 MGKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFL-DMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAES 195          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: Y2478_STAAM (Uncharacterized oxidoreductase SAV2478 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2478 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.111e-17
Identity = 56/202 (27.72%), Postives = 109/202 (53.96%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDMLTSCFGTSAASYQPPD 680
            +  ++TG   G+G A+A  L + G  V+   R +DKL ++ ++L   D    +  D+ +   V+EL ++  +  G  DI++N+AG +  ++KI D   +E+D++ID N+KG     +  +P M+    G ++N++S  G         Y A+K AV  +++ + KE+   G+ + +++PG+++T +         A+Y P D
Sbjct:    7 KIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQNVANQLAQ-DSVKVVPTDVTNKEEVDELMKIAQQTFGGLDIVINSAGQM-LSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAI--------TAAYNPSD 198          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: Y2266_STAAN (Uncharacterized oxidoreductase SA2266 OS=Staphylococcus aureus (strain N315) GN=SA2266 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.111e-17
Identity = 56/202 (27.72%), Postives = 109/202 (53.96%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDMLTSCFGTSAASYQPPD 680
            +  ++TG   G+G A+A  L + G  V+   R +DKL ++ ++L   D    +  D+ +   V+EL ++  +  G  DI++N+AG +  ++KI D   +E+D++ID N+KG     +  +P M+    G ++N++S  G         Y A+K AV  +++ + KE+   G+ + +++PG+++T +         A+Y P D
Sbjct:    7 KIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQNVANQLAQ-DSVKVVPTDVTNKEEVDELMKIAQQTFGGLDIVINSAGQM-LSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAI--------TAAYNPSD 198          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: Y1385_MYCBO (Uncharacterized oxidoreductase Mb1385 OS=Mycobacterium bovis GN=fabG2 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.111e-17
Identity = 62/187 (33.16%), Postives = 98/187 (52.41%), Query Frame = 3
Query:   75 SRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            +RT +ITG ++GLG A+ Q     G  V+      +        L   D  L +  D+     V+ L R  VE+ G  D++VNNAG I ++  +  ++ E+FD VI  ++KG  N  R    +M   K+G IVNMSS  G+ G      Y A+K  + G++++ AKE+   G+ + A+ PG+I + M
Sbjct:    7 ARTAVITGGAQGLGLAIGQRFVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDVMVNNAG-ITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAM 192          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: Y1350_MYCTU (Uncharacterized oxidoreductase Rv1350/MT1393 OS=Mycobacterium tuberculosis GN=fabG2 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.111e-17
Identity = 62/187 (33.16%), Postives = 98/187 (52.41%), Query Frame = 3
Query:   75 SRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            +RT +ITG ++GLG A+ Q     G  V+      +        L   D  L +  D+     V+ L R  VE+ G  D++VNNAG I ++  +  ++ E+FD VI  ++KG  N  R    +M   K+G IVNMSS  G+ G      Y A+K  + G++++ AKE+   G+ + A+ PG+I + M
Sbjct:    7 ARTAVITGGAQGLGLAIGQRFVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDVMVNNAG-ITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAM 192          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_PSEAE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Pseudomonas aeruginosa GN=fabG PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.111e-17
Identity = 60/187 (32.09%), Postives = 101/187 (54.01%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELP-NPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            +  L+TG SRG+G+A+A EL + G  VIG + +      +   L  N      L +D+ S+ SV      + +  G P I+VNNAG I ++N +  +  +E+  V++TN+  +  + +  +  M   + G I+N+ S  G  G A    Y A+K  +EG +R++A+EV    + + A+ PG I+TDM
Sbjct:    6 KVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAG-ITRDNLLVRMKDDEWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDM 191          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: Y2403_STAAW (Uncharacterized oxidoreductase MW2403 OS=Staphylococcus aureus (strain MW2) GN=MW2403 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.450e-17
Identity = 55/202 (27.23%), Postives = 111/202 (54.95%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDMLTSCFGTSAASYQPPD 680
            +  ++TG   G+G A+A  L + G  V+   R ++KL ++ ++L + D    +  D+ +   V+EL ++  +  G  DI++N+AG +  ++KI D   +E+D++ID N+KG    ++  +P M+    G ++N++S  G         Y A+K AV  +++ + KE+   G+ + +++PG+++T +         A+Y P D
Sbjct:    7 KIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQL-SQDSVKVVPTDVTNKEEVDELIKIAQQTFGGLDIVINSAGQM-LSSKITDYQVDEWDSMIDVNIKGTLYTVQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAI--------TAAYNPSD 198          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: Y2370_STAAS (Uncharacterized oxidoreductase SAS2370 OS=Staphylococcus aureus (strain MSSA476) GN=SAS2370 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.450e-17
Identity = 55/202 (27.23%), Postives = 111/202 (54.95%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDMLTSCFGTSAASYQPPD 680
            +  ++TG   G+G A+A  L + G  V+   R ++KL ++ ++L + D    +  D+ +   V+EL ++  +  G  DI++N+AG +  ++KI D   +E+D++ID N+KG    ++  +P M+    G ++N++S  G         Y A+K AV  +++ + KE+   G+ + +++PG+++T +         A+Y P D
Sbjct:    7 KIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQL-SQDSVKVVPTDVTNKEEVDELIKIAQQTFGGLDIVINSAGQM-LSSKITDYQVDEWDSMIDVNIKGTLYTVQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAI--------TAAYNPSD 198          
The following BLAST results are available for this feature:
BLAST of CK935676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
Y2422_STAA36.511e-1826.73Uncharacterized oxidoreductase SAUSA300_2422 OS=St... [more]
UCPA_ECOLI8.504e-1834.52Oxidoreductase ucpA OS=Escherichia coli (strain K1... [more]
UCPA_ECO578.504e-1834.52Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN... [more]
Y2478_STAAM1.111e-1727.72Uncharacterized oxidoreductase SAV2478 OS=Staphylo... [more]
Y2266_STAAN1.111e-1727.72Uncharacterized oxidoreductase SA2266 OS=Staphyloc... [more]
Y1385_MYCBO1.111e-1733.16Uncharacterized oxidoreductase Mb1385 OS=Mycobacte... [more]
Y1350_MYCTU1.111e-1733.16Uncharacterized oxidoreductase Rv1350/MT1393 OS=My... [more]
FABG_PSEAE1.111e-1732.093-oxoacyl-[acyl-carrier-protein] reductase OS=Pseu... [more]
Y2403_STAAW1.450e-1727.23Uncharacterized oxidoreductase MW2403 OS=Staphyloc... [more]
Y2370_STAAS1.450e-1727.23Uncharacterized oxidoreductase SAS2370 OS=Staphylo... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_G11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935676 ID=CK935676; Name=CK935676; organism=Citrus sinensis; type=EST; length=924bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAAATCCTGGTGTTATTAACACTGACATGCTTACGTCCTGCTTTGGC
ACTTCTGCTGCATCATACCAGCCACCTGATGCATGGGCTTTGAAGGCAGC
TACGACGATACTCAATCTTACAGGAGCAGACAATGGTGCATCTCTTACGG
TGTGACAGAAGCTTTTACATTCAAAATGCTGGGATCCAGCTAGGCGAGCG
TAACAGTTCACTGATAAAATCATATTCACTCTTCACTCATTGAATCAAAA
AGTAGAGCAGAGTGAACTNCATTCATCTTTTGTGACTTCTATGACACCTN
NNNNNCAGGAAAGCGGTTATTCTT
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