CK935676

Overview
NameCK935676
Unique NameCK935676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: YM71_YEAST (Uncharacterized oxidoreductase YMR226C OS=Saccharomyces cerevisiae GN=YMR226C PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.604e-16
Identity = 58/192 (30.21%), Postives = 100/192 (52.08%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGH---TVIGCSRTQDKLTSLQS----ELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTD 629
            +TVLITG S G+G+A A E  +  +    +I  +R  +KL  L+     E PN   H+   +DI     ++     + ++    DI+VNNAG    ++++  ++ E+   V DTNV  + N+ +  +P+      G IVN+ S  GR      + YCASK+AV   + S+ KE +   + ++ + PG++ T+
Sbjct:   14 KTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHV-AQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETE 204          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: YCIK_ECOLI (Uncharacterized oxidoreductase yciK OS=Escherichia coli (strain K12) GN=yciK PE=1 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 1.604e-16
Identity = 57/196 (29.08%), Postives = 96/196 (48.98%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQS----ELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPDGMAIVALNPGVINTDMLTSCFGT 653
            R +L+TG S G+GR  A   A+ G TVI   R ++KL  + S    E         L++   ++ + ++LA+ +       D +++NAG +     + + +P+ +  V+  NV     + +  +PL++    G +V  SS  GR G A    Y ASK+A EG+ + +A E    + +  +NPG   T M  S F T
Sbjct:   13 RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAFPT 208          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: Y4MP_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4mP OS=Rhizobium sp. (strain NGR234) GN=NGR_a02430 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.604e-16
Identity = 60/192 (31.25%), Postives = 101/192 (52.60%), Query Frame = 3
Query:   78 RTVLITGVS--RGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDH--HLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVA--PYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDM 632
            +T +I+G +  RG+GRA A+  A  G  V       D+  +   +LP  +H  H+ L  D+   +S    +  V+   GV +I++NNAG I +  K  D+S  ++  ++  N+ G+ N+ + FIP M     G I  MSS   + G  +     Y A+K  V GL++++A+E  PD + +  + PG+I TD+
Sbjct:    6 KTAVISGAASKRGIGRATAELFASHGARVAILDINADEAKAAAGDLPPVEHGAHIGLRCDVADRASCTSASDEVLSAFGVANILINNAG-ITQPVKTLDISDADWQRIVAVNMTGVLNLSQVFIPNMRQNGGGSIACMSSVSAQRGGGIFGGPHYSAAKAGVLGLAKAMAREFGPDSIRVNCVTPGLIQTDI 196          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG1_SYNY3 (3-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Synechocystis sp. (strain PCC 6803) GN=fabG1 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.604e-16
Identity = 58/189 (30.69%), Postives = 104/189 (55.03%), Query Frame = 3
Query:   75 SRTVLITGVSRGLGRALAQELAKRG-HTVIGCSRTQDKLTSLQSEL-PNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            ++  L+TG SRG+G+A A  LA  G   V+  +++     ++ +E+  N    + +  ++ +   V++L +  ++K    D++VNNAG I ++  +  +  E++  VID N+ G+    +    LM+  K G I+N++S  G  G    A Y A+K  V G +++VAKE+   G+ + A+ PG I TDM
Sbjct:    6 AQVALVTGASRGIGKATALALAATGMKVVVNYAQSSTAADAVVAEIIANGGEAIAVQANVANADEVDQLIKTTLDKFSRIDVLVNNAG-ITRDTLLLRMKLEDWQAVIDLNLTGVFLCTKAVSKLMLKQKSGRIINITSVAGMMGNPGQANYSAAKAGVIGFTKTVAKELASRGVTVNAVAPGFIATDM 193          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_BUCBP (3-oxoacyl-[acyl-carrier-protein] reductase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=fabG PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.573e-16
Identity = 58/203 (28.57%), Postives = 107/203 (52.71%), Query Frame = 3
Query:   66 KSVSRTVLITGVSRGLGRALAQELAKRGH-TVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDMLTSCFGTSAASY 668
            K+  +  +ITG +RGLG+ +A+EL+   + TVIG S +Q     +   L N  + + + +DI + + + +    V +  G  DI++NNAG I ++  + ++  +++++V++ N+  I  M +  I  MI  KQG I+ + S     G      Y A+K  + G  +S+A E+ P G+ +  + PG+I T M  +      + Y
Sbjct:    2 KTTKKIAVITGANRGLGKGIAEELSNTNNITVIGTSTSQKGCKIINKYLKN--NGIGIKLDITNPNEITKTMDFVYKNFGRVDILINNAGII-RDKLLINMKTQDWNSVLNVNLNSIFYMSKSVIRNMIKNKQGKIITIGSVIAHIGNCGQTNYSAAKLGLVGFHKSLALELAPKGITVNMIAPGLIKTGMTNNLSQKQLSKY 201          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_RICCN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia conorii GN=fabG PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.666e-16
Identity = 68/187 (36.36%), Postives = 99/187 (52.94%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIR-SNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            +T LITG S G+G A+A+ L K G  VI     ++KL SL   + +       N  I   N + +E  R ++ K    DI+V NAG I  +     +  E+FD VID N+K    + R  I  MI  + G I+N+SS  G SG    A YCASK  + G+++S++ EV   G+ +  + PG I +DM
Sbjct:    7 KTSLITGASGGIGGAIARLLHKLGSHVIISGSNEEKLQSLGKVVKD-------NYTIEVCNLADKEECRNLISKASKLDILVCNAG-ITSDTLAIRMKDEDFDKVIDINLKANFILNREAIKKMIQNRYGRIINISSIVGISGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNTVAPGFIKSDM 185          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: YDFG_ECOL6 (NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG OS=Escherichia coli O6 GN=ydfG PE=3 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 6.094e-16
Identity = 58/181 (32.04%), Postives = 95/181 (52.49%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEE-LARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVI 620
            VL+TG + G G  + +   ++GH VI   R Q++L  L+ EL   D+     +D+R+ +++EE LA L  E   + DI+VNNAG           S E+++T+IDTN KG+  M R  +P M+    G I+N+ S  G    A    Y A+K  V   S ++  ++    + +  + PG++
Sbjct:    3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG--DNLYIAQLDVRNRAAIEEMLASLPAEWSNI-DILVNNAGLALGMEPAHKASIEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLV 180          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: Y452_LISIN (Uncharacterized oxidoreductase Lin0452 OS=Listeria innocua GN=lin0452 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.094e-16
Identity = 59/191 (30.89%), Postives = 97/191 (50.79%), Query Frame = 3
Query:   75 SRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSL-QSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAI--VALNPGVINTDML 635
            ++ ++ITG S G+G A A  LA++G  ++  +R  +KL  + Q+   +    +F   D+      ++L  L +E+ G  D I  NAG I  N+ +  +  +E++ +ID N+KG+ N +   +P  I  K G I+  SS  G       A Y A+KWAV  L   +  E   +G  I    + P  INT++L
Sbjct:    5 NKVIIITGASSGIGEATAILLAEKGAKLVLAARRVEKLEKIVQTIKASSGEAIFAKTDVTKREDNKKLVELAIERYGKVDAIFLNAG-IMPNSPLSALKEDEWEQMIDINIKGVLNGIAAVLPSFIAQKSGHIIATSSVAGLKAYPGGAVYGATKWAVRDLMEVLRMESAQEGTNIRTATIYPAAINTELL 194          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: HSD_STREX (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Streptomyces exfoliatus PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.094e-16
Identity = 65/189 (34.39%), Postives = 98/189 (51.85%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVV---EKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDM 632
            +TV+ITG +RGLG   A++    G  V+      ++  +   EL +   +  L+V I      E+  R+V    E+ G  D +VNNAG I+    +   S E F  V+D N+ G+   ++  IP M     G IVN+SS  G  G AL + Y ASKW V GLS+  A E+  D + + +++PG+  T M
Sbjct:    7 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIE-----EDWQRVVAYAREEFGSVDGLVNNAG-ISTGMFLETESVERFRKVVDINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM 189          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_CHLTR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia trachomatis GN=fabG PE=1 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 6.094e-16
Identity = 63/198 (31.82%), Postives = 103/198 (52.02%), Query Frame = 3
Query:   63 GKSVSRTVLITGVSRGLGRALAQELAKRGHTV----IGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDMLTS 641
            G  V++T ++TG SRG+G ++A+  A++G  V    I     Q    +L  +        F  VD+  N  V    +  + +    D+IVNNAG I ++  +  +S EE+ +VI+TN+  I N+    I  MI  + G I+N+SS  G  G+     Y A+K  + G S++++KEV    + +  + PG I+TDM  S
Sbjct:    3 GLLVNKTAIVTGGSRGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVS--FALVDVSKNDMVSAQVQNFLAEYNTIDVIVNNAG-ITRDALLMRMSEEEWSSVINTNLGSIYNVCSAVIRPMIKARSGAIINISSIVGLRGSPGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTDMTKS 197          
The following BLAST results are available for this feature:
BLAST of CK935676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
YM71_YEAST1.604e-1630.21Uncharacterized oxidoreductase YMR226C OS=Saccharo... [more]
YCIK_ECOLI1.604e-1629.08Uncharacterized oxidoreductase yciK OS=Escherichia... [more]
Y4MP_RHISN1.604e-1631.25Uncharacterized short-chain type dehydrogenase/red... [more]
FABG1_SYNY31.604e-1630.693-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Sy... [more]
FABG_BUCBP3.573e-1628.573-oxoacyl-[acyl-carrier-protein] reductase OS=Buch... [more]
FABG_RICCN4.666e-1636.363-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
YDFG_ECOL66.094e-1632.04NADP-dependent L-serine/L-allo-threonine dehydroge... [more]
Y452_LISIN6.094e-1630.89Uncharacterized oxidoreductase Lin0452 OS=Listeria... [more]
HSD_STREX6.094e-1634.393-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
FABG_CHLTR6.094e-1631.823-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_G11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935676 ID=CK935676; Name=CK935676; organism=Citrus sinensis; type=EST; length=924bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAAATCCTGGTGTTATTAACACTGACATGCTTACGTCCTGCTTTGGC
ACTTCTGCTGCATCATACCAGCCACCTGATGCATGGGCTTTGAAGGCAGC
TACGACGATACTCAATCTTACAGGAGCAGACAATGGTGCATCTCTTACGG
TGTGACAGAAGCTTTTACATTCAAAATGCTGGGATCCAGCTAGGCGAGCG
TAACAGTTCACTGATAAAATCATATTCACTCTTCACTCATTGAATCAAAA
AGTAGAGCAGAGTGAACTNCATTCATCTTTTGTGACTTCTATGACACCTN
NNNNNCAGGAAAGCGGTTATTCTT
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