CK935676

Overview
NameCK935676
Unique NameCK935676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7718 contig Csv1_Contig7718:38..961. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: YDFG_ECOLI (NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG OS=Escherichia coli (strain K12) GN=ydfG PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 1.039e-15
Identity = 58/181 (32.04%), Postives = 95/181 (52.49%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEE-LARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVI 620
            VL+TG + G G  + +   ++GH VI   R Q++L  L+ EL   D+     +D+R+ +++EE LA L  E   + DI+VNNAG           S E+++T+IDTN KG+  M R  +P M+    G I+N+ S  G    A    Y A+K  V   S ++  ++    + +  + PG++
Sbjct:    3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG--DNLYIAQLDVRNRAAIEEMLASLPAEWCNI-DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLV 180          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: BAIA1_EUBSP (Bile acid 7-dehydroxylase 1/3 OS=Eubacterium sp. (strain VPI 12708) GN=baiA1 PE=1 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 1.039e-15
Identity = 59/189 (31.22%), Postives = 96/189 (50.79%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPN---PDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDM 632
            +  +ITG +RG+G A A+   + G  V     TQ+++ +  ++L      +  L    D+ S  +V      V +K G  D+++NNAG I  N+    VS E+F  ++D NV G+ N        M   KQG+I+N +S  G  G+     Y  SK  V GL+  + +E +   + +V + PGV++TDM
Sbjct:    7 KITIITGGTRGIGFAAAKLFIENGAKVSIFGETQEEVDTALAQLKELYPEEEVLGFAPDLTSRDAVMAAVGTVAQKYGRLDVMINNAG-ITMNSVFSRVSEEDFKNIMDINVNGVFNGAWSAYQCMKDAKQGVIINTASVTGIYGSLSGIGYPTSKAGVIGLTHGLGREIIRKNIRVVGVAPGVVDTDM 194          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: YDFG_SHIFL (NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG OS=Shigella flexneri GN=ydfG PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.358e-15
Identity = 58/181 (32.04%), Postives = 94/181 (51.93%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEE-LARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVI 620
            VL+TG + G G  + +   ++GH VI   R Q++L  L  EL   D+     +D+R+ +++EE LA L  E   + DI+VNNAG           S E+++T+IDTN KG+  M R  +P M+    G I+N+ S  G    A    Y A+K  V   S ++  ++    + +  + PG++
Sbjct:    3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELTDELG--DNLYIAQLDVRNRAAIEEMLASLPAEWSNI-DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTTVRVTDIEPGLV 180          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: YDFG_ECO57 (NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG OS=Escherichia coli O157:H7 GN=ydfG PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.358e-15
Identity = 58/181 (32.04%), Postives = 95/181 (52.49%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEE-LARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVI 620
            VL+TG + G G  + +   ++GH VI   R Q++L  L+ EL   D+     +D+R+ +++EE LA L  E   + DI+VNNAG           S E+++T+IDTN KG+  M R  +P M+    G I+N+ S  G    A    Y A+K  V   S ++  ++    + +  + PG++
Sbjct:    3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG--DNLYIAQLDVRNRAAIEEMLASLPAEWCNI-DILVNNAGLALGMEPAHKASIEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLV 180          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_RICTY (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia typhi GN=fabG PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.316e-15
Identity = 65/186 (34.95%), Postives = 104/186 (55.91%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            +T LITG S G+G A+A+ L K G  VI     + KL  L + L   D+++   +++ + ++ EE   L+ +   + DI+V NAG I  +     +  ++FD VID N+K    + R  I  MI  + G I+N+SS  G +G    A YCASK  + G+++S++ EV   G+ + A+ PG I +DM
Sbjct:    7 KTSLITGASGGIGSAIARLLHKLGSKVIISGSNEKKLKLLGNTLK--DNYI---IEVCNLANKEECNNLISKISNL-DILVCNAG-ITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDM 185          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: BDHA_RHIME (D-beta-hydroxybutyrate dehydrogenase OS=Rhizobium meliloti GN=bdhA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.316e-15
Identity = 56/192 (29.17%), Postives = 105/192 (54.69%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRG-HTVIGCSRTQDKLTSLQSELPNPDHHLFLN--VDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDML 635
            +++T +ITG + G+G A+A+ LAK G + V+      D++ ++  E+        L+   D+   S + ++  +V ++ G  DI+VNNAG +    KI D   E++D +I  N+    + +R  IP M     G I+N++S  G   +   + Y A+K  + GL+++VA EV + G+ + ++ PG + T ++
Sbjct:    1 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAG-VQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLV 191          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: YXBG_BACSU (Uncharacterized oxidoreductase yxbG OS=Bacillus subtilis GN=yxbG PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 3.024e-15
Identity = 54/200 (27.00%), Postives = 104/200 (52.00%), Query Frame = 3
Query:   60 IGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSEL-PNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDMLTSCFGT 653
            +G+  ++T +ITG + G+G+A A+  A  G  VI     +D++      +  N       ++D+   +SV+  A  + +  G  DI+ NNAG   +  K+ +   + FD +I  +++G     ++ IPLM+    G I+N SS  GR+     + Y A+K  +  L++++A +   +G+ + +++PG I T ++    GT
Sbjct:    1 MGRLENKTAVITGAATGIGQATAEVFANEGARVIIGDINKDQMEETVDAIRKNGGQAESFHLDVSDENSVKAFADQIKDACGTIDILFNNAGVDQEGGKVHEYPVDLFDRIIAVDLRGTFLCSKYLIPLMLE-NGGSIINTSSMSGRAADLDRSGYNAAKGGITNLTKAMAIDYARNGIRVNSISPGTIETPLIDKLAGT 199          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: YDFG_SALTY (NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG OS=Salmonella typhimurium GN=ydfG PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.024e-15
Identity = 53/180 (29.44%), Postives = 95/180 (52.78%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVI 620
            VL+TG + G G  +A+   + GH VI   R  ++L +L+ EL   ++ L   +D+R+ +++EE+   +  +    D++VNNAG           S E+++T+IDTN KG+  M R  +P M+   +G I+N+ S  G    A    Y A+K  V   S ++  ++    + +  + PG++
Sbjct:    3 VLVTGATAGFGECIARRFVENGHKVIATGRRHERLQALKDELG--ENVLTAQLDVRNRAAIEEMMASLPAQWRDIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLIYMTRAVLPGMVERNRGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLV 180          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: YDFG_SALTI (NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG OS=Salmonella typhi GN=ydfG PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.024e-15
Identity = 53/180 (29.44%), Postives = 95/180 (52.78%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVI 620
            VL+TG + G G  +A+   + GH VI   R  ++L +L+ EL   ++ L   +D+R+ +++EE+   +  +    D++VNNAG           S E+++T+IDTN KG+  M R  +P M+   +G I+N+ S  G    A    Y A+K  V   S ++  ++    + +  + PG++
Sbjct:    3 VLVTGATAGFGECIARRFVENGHKVIATGRRHERLQALKDELG--ENVLTAQLDVRNRAAIEEMMASLPAQWRDIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLIYMTRAVLPGMVERNRGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLV 180          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: Y0419_STAS1 (Uncharacterized oxidoreductase SSP0419 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP0419 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.024e-15
Identity = 52/188 (27.66%), Postives = 98/188 (52.13%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLN--VDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDM 632
            +  ++TG S G+G ++A+ LA +G  V+   R + +L  +   + +    +     VD+     V EL     EK G  DI+VN+AG +  ++ I +   E ++ +ID N+KG    +   +P M+    G I+N++S  G         Y ASK AV  +++ + KE+   G+ + +++PG+++T +
Sbjct:    7 KVAVVTGASSGIGASIAETLANQGVKVVLTGRDESRLAEVAKRIQDNKQAVVETSIVDVTHKEEVTELVEKTKEKFGQIDILVNSAGLM-LSSAITEGDVEAWEAMIDVNIKGTLYTINAVLPSMLNQSSGHIINIASISGFEVTKKSTLYSASKAAVHSITQGLEKELAKTGVRVTSISPGMVDTPL 193          
The following BLAST results are available for this feature:
BLAST of CK935676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
YDFG_ECOLI1.039e-1532.04NADP-dependent L-serine/L-allo-threonine dehydroge... [more]
BAIA1_EUBSP1.039e-1531.22Bile acid 7-dehydroxylase 1/3 OS=Eubacterium sp. (... [more]
YDFG_SHIFL1.358e-1532.04NADP-dependent L-serine/L-allo-threonine dehydroge... [more]
YDFG_ECO571.358e-1532.04NADP-dependent L-serine/L-allo-threonine dehydroge... [more]
FABG_RICTY2.316e-1534.953-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
BDHA_RHIME2.316e-1529.17D-beta-hydroxybutyrate dehydrogenase OS=Rhizobium ... [more]
YXBG_BACSU3.024e-1527.00Uncharacterized oxidoreductase yxbG OS=Bacillus su... [more]
YDFG_SALTY3.024e-1529.44NADP-dependent L-serine/L-allo-threonine dehydroge... [more]
YDFG_SALTI3.024e-1529.44NADP-dependent L-serine/L-allo-threonine dehydroge... [more]
Y0419_STAS13.024e-1527.66Uncharacterized oxidoreductase SSP0419 OS=Staphylo... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_G11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935676 ID=CK935676; Name=CK935676; organism=Citrus sinensis; type=EST; length=924bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAAATCCTGGTGTTATTAACACTGACATGCTTACGTCCTGCTTTGGC
ACTTCTGCTGCATCATACCAGCCACCTGATGCATGGGCTTTGAAGGCAGC
TACGACGATACTCAATCTTACAGGAGCAGACAATGGTGCATCTCTTACGG
TGTGACAGAAGCTTTTACATTCAAAATGCTGGGATCCAGCTAGGCGAGCG
TAACAGTTCACTGATAAAATCATATTCACTCTTCACTCATTGAATCAAAA
AGTAGAGCAGAGTGAACTNCATTCATCTTTTGTGACTTCTATGACACCTN
NNNNNCAGGAAAGCGGTTATTCTT
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