CK935676

Overview
NameCK935676
Unique NameCK935676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DHRS7_ANOGA (Dehydrogenase/reductase SDR family protein 7-like OS=Anopheles gambiae GN=AGAP005532 PE=3 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 3.950e-15
Identity = 65/216 (30.09%), Postives = 104/216 (48.15%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPN-----PDH-HLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVK-------GIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDMLTSCFGTSAASYQPPDA 683
            + VLITG S GLG ALA      G  V+  +R +D+L  ++ +L       P H  + L +D+   +S+    + V+E  G  DI+VNN G          V  +   T ID +++       G   + +  +P M+  K+G IV++SS  G+      + Y ASK A++    S+  EV  D + +  ++PG INT +  +    + ASY   DA
Sbjct:   49 KVVLITGASSGLGEALAHSFFLAGCKVVLAARRKDELERVRKDLLELHATVPTHPPIILPLDLSDLNSIGGKVQSVLEIHGAIDILVNNGGI--------SVRGDALSTAIDVDIRIMLVNYFGSVALTKACLPSMMARKEGRIVSISSVQGKFAIPHRSAYSASKHAMQAFCDSLRAEVAKDNIKVTLISPGYINTALSLNALTGTGASYGKMDA 256          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG5_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplastic (Fragment) OS=Brassica napus GN=bkr1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.159e-15
Identity = 57/204 (27.94%), Postives = 103/204 (50.49%), Query Frame = 3
Query:   30 TMAATTPFNGIGKSVSRTVLITGVSRGLGRALAQELAKRGHTV-IGCSRTQDKLTSLQSELPN-PDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDM 632
            T    T    + K  S  V++TG SRG+G+A+A  L K G  V +  +R+  +   +  ++       +    D+   + V+ + +  V+K G  D++VNNAG I ++  +  +   ++D VID N+ G+    +    +M+  ++G I+N++S  G  G    A Y A+K  V G S++ A+E     + +  + PG I +DM
Sbjct:   59 TATEQTTEEAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEEYGGEAITFGGDVSKEADVDSMMKTAVDKWGTIDVVVNNAG-ITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDM 261          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: HCD2_DROME (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Drosophila melanogaster GN=scu PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.738e-15
Identity = 67/197 (34.01%), Postives = 97/197 (49.24%), Query Frame = 3
Query:   87 LITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTIN-----KNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLM------IPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDMLTS 641
            L+TG + GLGRA A+ LAK+G +VI       K   +  EL   D  +F+ VD+ S   V    +   +K G  D+ VN AGT         NK      E+F  VI+ N  G  N++R    LM         ++G+IVN +S     G    A Y ASK AV G++  +A+++   G+ I  + PG+ NT ML +
Sbjct:    8 LVTGGASGLGRATAERLAKQGASVILADLPSSKGNEVAKEL--GDKVVFVPVDVTSEKDVSAALQTAKDKFGRLDLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININTVGTFNVIRLSAGLMGANEPNQDGQRGVIVNTASVAAFDGQIGQAAYSASKAAVVGMTLPIARDLSTQGIRICTIAPGLFNTPMLAA 202          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_CHLPN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia pneumoniae GN=fabG PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.738e-15
Identity = 60/195 (30.77%), Postives = 100/195 (51.28%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTV----IGCSRTQ---DKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDM 632
            V + V++TG SRG+G  + +   + G  V    +   R Q   + LT L  E+       F  VD+  N  V++  +  ++K    DI+VNNAG I ++N +  +S +++ +VI TN+  +       I  MI  + G I+N++S   + G+A    Y A+K  +   ++S+AKEV    + +  L PG I TDM
Sbjct:    6 VGKKVIVTGGSRGIGLGIVKLFLENGADVEIWGLNEERGQAVIESLTGLGGEVS------FARVDVSHNGGVKDCVQKFLDKHNKIDILVNNAG-ITRDNLLMRMSEDDWQSVISTNLTSLYYTCSSVIRHMIKARSGSIINVASIVAKIGSAGQTNYAAAKAGIIAFTKSLAKEVAARNIRVNCLAPGFIETDM 193          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_AQUAE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Aquifex aeolicus GN=fabG PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.738e-15
Identity = 63/196 (32.14%), Postives = 108/196 (55.10%), Query Frame = 3
Query:   66 KSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPN----PDHHLFLNV--DIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDM 632
            K   +  L+TG +RG+GRA+A++LA  G TVI    + ++  ++  E+ N      H + +N+  +   N + EE+  LV    G+ DI+VNNAG I ++     +S  +++ V+  N+ G   + ++ +  MI  + G IVN+SS  G +G      Y  +K  + G ++S+AKE+ P  + + A+ PG I TDM
Sbjct:    4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLV---DGI-DILVNNAG-ITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDM 194          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: SDH_AGRT5 (Serine 3-dehydrogenase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=sdh PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.800e-15
Identity = 54/187 (28.88%), Postives = 95/187 (50.80%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTD 629
            +S T+LITG + G G+A A+   K G  VIG  R  ++L +L +EL    H +    DI    + E+    + +     DI+VNNAG          V+ +++ T++DTN+ G+ N+  H +P +I  ++GI+VN+SS            Y  +K  +   S  +  ++   G+ + ++ PG+  T+
Sbjct:    1 MSGTILITGATSGFGQATARRFVKEGWKVIGTGRRAERLEALAAELGQAFHGIAF--DITDEDATEKALAALPDGFRDIDILVNNAGLALGTAPAPQVALKDWQTMVDTNITGLLNITHHLLPTLIK-QKGIVVNLSSVAAHYPYLGGNVYGGTKAFLRQFSLGLRSDLHGKGVRVTSIEPGMCETE 184          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DHRS7_MOUSE (Dehydrogenase/reductase SDR family member 7 OS=Mus musculus GN=Dhrs7 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.149e-14
Identity = 57/195 (29.23%), Postives = 105/195 (53.85%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSE-LPNPDHH----LFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD--GMAIVALNPGVINTDMLTSCF 647
            V +TG S G+G  LA +L+K G +++  +R   +L  ++   L N +      L L +D+   SS E   + V+++ G  DI+VNN G  ++ + + + + + F  +I+ N  G  ++ +  +P MI  KQG IV ++S  G +  +L + YCASK A+ G   ++  E+    G+    + PG + +D++ + F
Sbjct:   53 VWVTGASSGIGEELAFQLSKLGVSLVLSARRAQELERVKRRCLENGNLKEKDILVLPLDLTDTSSHEAATKAVLQEFGKIDILVNNGGR-SQRSLVLETNLDVFKELINLNYIGTVSLTKCVLPHMIERKQGKIVTVNSIAGIASVSLSSGYCASKHALRGFFNALHSELGQYPGITFCNVYPGPVQSDIVKNAF 246          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_MYCS2 (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium smegmatis GN=fabG PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.501e-14
Identity = 58/188 (30.85%), Postives = 99/188 (52.66%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            VSR+VL+TG +RG+G A+A+ LA  GH V    R              PD    +  D+  +++V+   + V E +G  +++V NAG I+K+  +  ++ E F+ VI+TN+ G     +     M   + G I+ + S  G  G    A Y A+K  + G++RS+++E+   G+    + PG I+T+M
Sbjct:   22 VSRSVLVTGGNRGIGLAIARRLAADGHKVAVTHRGSGA----------PDDLFGVQCDVTDSAAVDRAFKEVEEHQGPVEVLVANAG-ISKDAFLMRMTEERFEEVINTNLTGAFRCAQRASRTMQRKRFGRIIFIGSVSGMWGIGNQANYAAAKAGLIGMARSISRELAKAGVTANVVAPGYIDTEM 198          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DHB14_HUMAN (17-beta-hydroxysteroid dehydrogenase 14 OS=Homo sapiens GN=HSD17B14 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.501e-14
Identity = 51/186 (27.42%), Postives = 94/186 (50.54%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVA-KEVPDGMAIVALNPGVINTDM 632
            + V++TG  RG+G  + +     G  V+ C + +    +L+ ELP     +F+  D+     V+ L    + + G  D +VNNAG      +  + S + F  +++ N+ G   + +  +P +    QG ++N+SS  G  G A   PY A+K AV  +++++A  E P G+ +  ++PG I T +
Sbjct:   10 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGA---VFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRK-SQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPL 191          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: SDH_RHIRD (Serine 3-dehydrogenase OS=Rhizobium radiobacter GN=sdh PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.960e-14
Identity = 54/187 (28.88%), Postives = 98/187 (52.41%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTD 629
            +S T+LITG + G G+A AQ   K G  VIG  R  ++L +L +EL +  H +  ++     ++ + LA L    + + DI+VNNAG          V  +++ T++DTN+ G+ N+  H +P +I  ++GI++N+SS            Y  +K  +   S  +  ++   G+ + ++ PG+  T+
Sbjct:    1 MSGTILITGATSGFGQATAQRFVKEGWKVIGTGRRAERLEALSAELGSAFHGVAFDI-TDEEATKKALAGLPDGFRDI-DILVNNAGLALGTAPAPQVPLKDWQTMVDTNITGLLNVTHHLLPTLIE-RKGIVINLSSVAAHYPYLGGNVYGGTKAFLRQFSLGLRSDLHGKGVRVTSIEPGMCETE 184          
The following BLAST results are available for this feature:
BLAST of CK935676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
DHRS7_ANOGA3.950e-1530.09Dehydrogenase/reductase SDR family protein 7-like ... [more]
FABG5_BRANA5.159e-1527.943-oxoacyl-[acyl-carrier-protein] reductase 5, chlo... [more]
HCD2_DROME6.738e-1534.013-hydroxyacyl-CoA dehydrogenase type-2 OS=Drosophi... [more]
FABG_CHLPN6.738e-1530.773-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
FABG_AQUAE6.738e-1532.143-oxoacyl-[acyl-carrier-protein] reductase OS=Aqui... [more]
SDH_AGRT58.800e-1528.88Serine 3-dehydrogenase OS=Agrobacterium tumefacien... [more]
DHRS7_MOUSE1.149e-1429.23Dehydrogenase/reductase SDR family member 7 OS=Mus... [more]
FABG_MYCS21.501e-1430.853-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
DHB14_HUMAN1.501e-1427.4217-beta-hydroxysteroid dehydrogenase 14 OS=Homo sa... [more]
SDH_RHIRD1.960e-1428.88Serine 3-dehydrogenase OS=Rhizobium radiobacter GN... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_G11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935676 ID=CK935676; Name=CK935676; organism=Citrus sinensis; type=EST; length=924bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAAATCCTGGTGTTATTAACACTGACATGCTTACGTCCTGCTTTGGC
ACTTCTGCTGCATCATACCAGCCACCTGATGCATGGGCTTTGAAGGCAGC
TACGACGATACTCAATCTTACAGGAGCAGACAATGGTGCATCTCTTACGG
TGTGACAGAAGCTTTTACATTCAAAATGCTGGGATCCAGCTAGGCGAGCG
TAACAGTTCACTGATAAAATCATATTCACTCTTCACTCATTGAATCAAAA
AGTAGAGCAGAGTGAACTNCATTCATCTTTTGTGACTTCTATGACACCTN
NNNNNCAGGAAAGCGGTTATTCTT
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