CK935676

Overview
NameCK935676
Unique NameCK935676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7718 contig Csv1_Contig7718:38..961. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: HETN_ANASP (Ketoacyl reductase hetN OS=Anabaena sp. (strain PCC 7120) GN=hetN PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.560e-14
Identity = 66/220 (30.00%), Postives = 107/220 (48.64%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNP-DHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDMLTSCFGTSA---ASYQPPDAWALKAATTILNLT 722
            +TVL+TG SRGLG  +A+ LAK   TV+  SR+Q  L    + +       + +  D+R+ S +  L +   +  G  D+++NNAG I  N    + S  E  ++ +TN+     + R  +P M+    G IVN++S  G+ G A  + Y ASK  +   + ++ +E V  G+ I  + PG ++   +T     SA   A    P + A      I N T
Sbjct:    7 KTVLLTGASRGLGVYIARALAKEQATVVCVSRSQSGLAQTCNAVKAAGGKAIAIPFDVRNTSQLSALVQQAQDIVGPIDVLINNAG-IEINGTFANYSLAEIQSIFNTNLLAAMELTRLLLPSMMERGSGRIVNIASLAGKKGVAFNSVYSASKAGLIMWTDAMRQELVGTGVNISVVCPGYVSQTGMTVDTRVSAPKLAGISTPKSVANAVVKAIKNKT 225          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DR9C7_HUMAN (Short chain dehydrogenase/reductase family 9C member 7 OS=Homo sapiens GN=SDR9C7 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.560e-14
Identity = 60/197 (30.46%), Postives = 98/197 (49.75%), Query Frame = 3
Query:   54 NGIGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDI--IVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDML 635
            N +G    + V ITG   G G  LA++L  RG  V+    T++    LQ +         L  D+  + S++  A+ V +K G   +  +VNNAG    +     ++ ++F  VI+ N+ G+  +  H +P M+   +G +VNMSS  GR  A +   YC SK+ VE  S S+ +E+   G+ +  + PG   T +L
Sbjct:   18 NLVGNLSEKYVFITGCDSGFGNLLAKQLVDRGMQVLAACFTEEGSQKLQRDTSYRLQTTLL--DVTKSESIKAAAQWVRDKVGEQGLWALVNNAGVGLPSGPNEWLTKDDFVKVINVNLVGLIEVTLHMLP-MVKRARGRVVNMSSSGGRV-AVIGGGYCVSKFGVEAFSDSIRRELYYFGVKVCIIEPGNYRTAIL 210          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: CBR4_BOVIN (Carbonyl reductase family member 4 OS=Bos taurus GN=CBR4 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.560e-14
Identity = 57/188 (30.32%), Postives = 99/188 (52.66%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDM 632
            + +   + G SRG+GRA+A+ +A+RG+ +   +R  +   +   +L     HL L+ D+     V+     + +  G  + +VN AG IN++N +   + E+  + + TN+ G     R  +  MI  ++G IVN+ S  G  G +  + Y ASK  + G SR++AKEV    + +  + PG I+TDM
Sbjct:    1 MDKVCAVFGGSRGIGRAVARLMAQRGYRLAIVARNLEGARAAAGDLGGD--HLALSCDVAKEHDVQNTFEEIEKNLGRVNFLVNAAG-INRDNLLVRTNTEDMLSQLHTNLLGSMLTCRAALKTMIKQQRGSIVNVGSVVGLKGNSGQSVYSASKGGLVGFSRALAKEVAKKKIRVNVVAPGFIHTDM 185          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: LVR_LEIAQ (Levodione reductase OS=Leifsonia aquatica GN=lvr PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.344e-14
Identity = 66/206 (32.04%), Postives = 95/206 (46.12%), Query Frame = 3
Query:   30 TMAATTPFNGIGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPN--PDHHLFLNV-DIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDML 635
            T + TT F        R VLITG   GLGRA A  LA  G  +     + + L + ++ +    PD  +   V D+   + VE       E+ G  D   NNAG   K N     +  EFD V+  N++G+   L   + +M     G++VN +S  G  G    + Y A+K  V GL+R+ A E    G+ I A+ PG I T M+
Sbjct:    4 TSSPTTRFT------DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMV 203          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: KDUD_BACSU (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Bacillus subtilis GN=kduD PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.344e-14
Identity = 58/186 (31.18%), Postives = 98/186 (52.69%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLN--VDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINT 626
            +T L+TG   G+G+ +A+ LA  G  +IG S T     S   +L   +  +F +  +D+    ++++ A  + E + + DI+VNNAG I++  K  D   E +  V++ N+  +  + +     M+    G I+N++S     G  LV  Y ASK AV GL++S A E    G+ + A+ PG I+T
Sbjct:   13 KTALVTGPGTGIGQGIAKALAGAGADIIGTSHTSS--LSETQQLVEQEGRIFTSFTLDMSKPEAIKDSAAELFENRQI-DILVNNAGIIHRE-KAEDFPEENWQHVLNVNLNSLFILTQLAGRHMLKRGHGKIINIASLLSFQGGILVPAYTASKHAVAGLTKSFANEWAASGIQVNAIAPGYIST 194          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_MYCAV (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium avium GN=fabG PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.344e-14
Identity = 58/188 (30.85%), Postives = 96/188 (51.06%), Query Frame = 3
Query:   72 VSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            VSR+VL+TG +RG+G A+AQ LA   H V    R              PD    +  D+  N +V+     V E +G  +++V+NAG I+K+  +  ++ E F  VI+ N+ G   + +     M   + G I+ + S  G  G    A Y A+K  + G++RS+++E+   G+    + PG I+T+M
Sbjct:   22 VSRSVLVTGGNRGIGLAIAQRLAAEAHKVAVTHRGSGA----------PDGLFGVECDVTDNDAVDRAFTEVEEHQGPVEVLVSNAG-ISKDAFLIRMTEERFTEVINANLTGAFRVTQRAARSMQKKRFGRIIYIGSVSGMWGIGNQANYAAAKAGLIGMARSISRELSKAGVTANVVAPGYIDTEM 198          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG3_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 3, chloroplastic OS=Brassica napus GN=bkr3 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.344e-14
Identity = 58/211 (27.49%), Postives = 106/211 (50.24%), Query Frame = 3
Query:   21 TITTMAATTPFNGIGKSV----SRTVLITGVSRGLGRALAQELAKRGHTV-IGCSRTQDKLTSLQSELPN-PDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDM 632
            T+    AT      G++V    S  V++TG SRG+G+A+A  L K G  V +  +R+  +   +  ++       +    D+   + VE + +  ++  G  D++VNNAG I ++  +  +   ++D VID N+ G+    +    +M+  ++G I+N++S  G  G    A Y A+K  V G S++ A+E     + +  + PG I +DM
Sbjct:   50 TVVKAQATAVEQSTGEAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAG-ITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDM 259          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG1_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplastic OS=Brassica napus GN=gbkr1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.344e-14
Identity = 58/211 (27.49%), Postives = 106/211 (50.24%), Query Frame = 3
Query:   21 TITTMAATTPFNGIGKSV----SRTVLITGVSRGLGRALAQELAKRGHTV-IGCSRTQDKLTSLQSELPN-PDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDM 632
            T+    AT      G++V    S  V++TG SRG+G+A+A  L K G  V +  +R+  +   +  ++       +    D+   + VE + +  ++  G  D++VNNAG I ++  +  +   ++D VID N+ G+    +    +M+  ++G I+N++S  G  G    A Y A+K  V G S++ A+E     + +  + PG I +DM
Sbjct:   55 TVVKAQATAVEQSTGEAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAG-ITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDM 264          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: HSD_MYCTU (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium tuberculosis GN=fabG3 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.367e-14
Identity = 51/191 (26.70%), Postives = 100/191 (52.36%), Query Frame = 3
Query:   63 GKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDM 632
            G+ + +  L++G +RG+G +  + +   G  V+      ++  ++ +EL   D   ++++D+   +         V   G   ++VNNAG +N    I D +  E+  ++D N+ G+   +R  +  M    +G I+N+SS  G +G      Y A+K+AV GL++S A E+ P G+ + +++PG++ T M
Sbjct:    3 GRLIGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELA--DAARYVHLDVTQPAQWTAAVDTAVTAFGGLHVLVNNAGILNIGT-IEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPM 190          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: HSD_MYCBO (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium bovis GN=fabG3 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.367e-14
Identity = 51/191 (26.70%), Postives = 100/191 (52.36%), Query Frame = 3
Query:   63 GKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDM 632
            G+ + +  L++G +RG+G +  + +   G  V+      ++  ++ +EL   D   ++++D+   +         V   G   ++VNNAG +N    I D +  E+  ++D N+ G+   +R  +  M    +G I+N+SS  G +G      Y A+K+AV GL++S A E+ P G+ + +++PG++ T M
Sbjct:    3 GRLIGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELA--DAARYVHLDVTQPAQWTAAVDTAVTAFGGLHVLVNNAGILNIGT-IEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPM 190          
The following BLAST results are available for this feature:
BLAST of CK935676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
HETN_ANASP2.560e-1430.00Ketoacyl reductase hetN OS=Anabaena sp. (strain PC... [more]
DR9C7_HUMAN2.560e-1430.46Short chain dehydrogenase/reductase family 9C memb... [more]
CBR4_BOVIN2.560e-1430.32Carbonyl reductase family member 4 OS=Bos taurus G... [more]
LVR_LEIAQ3.344e-1432.04Levodione reductase OS=Leifsonia aquatica GN=lvr P... [more]
KDUD_BACSU3.344e-1431.182-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=B... [more]
FABG_MYCAV3.344e-1430.853-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
FABG3_BRANA3.344e-1427.493-oxoacyl-[acyl-carrier-protein] reductase 3, chlo... [more]
FABG1_BRANA3.344e-1427.493-oxoacyl-[acyl-carrier-protein] reductase 1, chlo... [more]
HSD_MYCTU4.367e-1426.703-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
HSD_MYCBO4.367e-1426.703-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_G11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935676 ID=CK935676; Name=CK935676; organism=Citrus sinensis; type=EST; length=924bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAAATCCTGGTGTTATTAACACTGACATGCTTACGTCCTGCTTTGGC
ACTTCTGCTGCATCATACCAGCCACCTGATGCATGGGCTTTGAAGGCAGC
TACGACGATACTCAATCTTACAGGAGCAGACAATGGTGCATCTCTTACGG
TGTGACAGAAGCTTTTACATTCAAAATGCTGGGATCCAGCTAGGCGAGCG
TAACAGTTCACTGATAAAATCATATTCACTCTTCACTCATTGAATCAAAA
AGTAGAGCAGAGTGAACTNCATTCATCTTTTGTGACTTCTATGACACCTN
NNNNNCAGGAAAGCGGTTATTCTT
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